Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02693

Experiment: PYE_noCalcium 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 30C survival rep2 28 days
2,845,070	-		CCNA_02691	0.74	+1.2
2,845,073	+		CCNA_02691	0.75	+0.8
2,845,073	+		CCNA_02691	0.75	+2.5
2,845,073	+		CCNA_02691	0.75	+0.9
2,845,081	-		CCNA_02691	0.76	-1.7
2,845,081	-		CCNA_02691	0.76	+2.8
2,845,097	+		CCNA_02691	0.78	+0.4
2,845,107	+		CCNA_02691	0.80	+1.6
2,845,107	+		CCNA_02691	0.80	+1.5
2,845,115	-		CCNA_02691	0.81	-1.7
2,845,115	-		CCNA_02691	0.81	-2.3
2,845,125	+		CCNA_02691	0.82	-1.7
2,845,164	+		CCNA_02691	0.88	+3.5
2,845,172	-		CCNA_02691	0.89	+1.6
2,845,207	+				-0.9
2,845,282	-				-1.5
2,845,292	+				-0.4
2,845,352	-		CCNA_02692	0.16	-0.2
2,845,381	+		CCNA_02692	0.20	-0.7
2,845,452	+		CCNA_02692	0.30	-2.3
2,845,460	-		CCNA_02692	0.31	-1.4
2,845,460	-		CCNA_02692	0.31	+2.0
2,845,483	-		CCNA_02692	0.35	-0.9
2,845,485	+		CCNA_02692	0.35	-0.2
2,845,485	+		CCNA_02692	0.35	-2.0
2,845,485	+		CCNA_02692	0.35	-0.2
2,845,485	+		CCNA_02692	0.35	-2.3
2,845,485	+		CCNA_02692	0.35	-1.7
2,845,493	-		CCNA_02692	0.36	+1.7
2,845,493	-		CCNA_02692	0.36	-2.3
2,845,504	-		CCNA_02692	0.38	-0.0
2,845,542	+		CCNA_02692	0.43	-1.7
2,845,542	+		CCNA_02692	0.43	-1.0
2,845,571	+		CCNA_02692	0.47	+0.5
2,845,573	-		CCNA_02692	0.48	+0.5
2,845,582	+		CCNA_02692	0.49	+1.9
2,845,629	+		CCNA_02692	0.56	-1.8
2,845,643	+		CCNA_02692	0.58	+1.2
2,845,676	+		CCNA_02692	0.62	+0.2
2,845,684	-		CCNA_02692	0.64	-1.7
2,845,684	-		CCNA_02692	0.64	-0.0
2,845,684	-		CCNA_02692	0.64	+0.5
2,845,691	+		CCNA_02692	0.65	+0.2
2,845,732	-		CCNA_02692	0.71	-2.5
2,845,754	+		CCNA_02692	0.74	-0.4
2,845,754	+		CCNA_02692	0.74	+0.5
2,845,754	+		CCNA_02692	0.74	+1.1
2,845,762	-		CCNA_02692	0.75	-2.4
2,845,778	+		CCNA_02692	0.77	-2.7
2,845,778	+		CCNA_02692	0.77	-0.8
2,845,778	+		CCNA_02692	0.77	-3.5
2,845,786	-		CCNA_02692	0.78	-1.7
2,845,786	-		CCNA_02692	0.78	-1.2
2,845,786	-		CCNA_02692	0.78	+0.5
2,845,786	-		CCNA_02692	0.78	-0.2
2,845,814	+		CCNA_02692	0.82	-3.4
2,845,814	+		CCNA_02692	0.82	+1.2
2,845,946	+				+1.7
2,845,952	+				+1.6
2,845,952	+				-1.2
2,845,952	+				+1.6
2,845,952	+				+0.5
2,845,960	-				-2.8
2,845,960	-				-2.0
2,846,056	+				-0.4
2,846,131	-				-1.3
2,846,131	-				-1.8
2,846,155	-				+1.4
2,846,178	-				-0.7
2,846,180	+				-1.1
2,846,190	-				+1.2
2,846,193	+				-1.5
2,846,193	+				-0.9
2,846,201	-				-2.8
2,846,233	+				-0.8
2,846,266	-		CCNA_02693	0.10	+0.4
2,846,326	-		CCNA_02693	0.13	+0.3
2,846,404	+		CCNA_02693	0.17	+1.2
2,846,474	+		CCNA_02693	0.21	-1.1
2,846,517	+		CCNA_02693	0.23	+1.2
2,846,517	-		CCNA_02693	0.23	-1.3
2,846,520	-		CCNA_02693	0.23	+1.8
2,846,525	-		CCNA_02693	0.24	+0.6
2,846,539	+		CCNA_02693	0.24	-1.4
2,846,539	+		CCNA_02693	0.24	-0.9
2,846,539	+		CCNA_02693	0.24	-0.2
2,846,539	+		CCNA_02693	0.24	-1.4
2,846,547	-		CCNA_02693	0.25	-0.7
2,846,547	-		CCNA_02693	0.25	-3.1
2,846,547	-		CCNA_02693	0.25	-1.6
2,846,552	-		CCNA_02693	0.25	+0.9
2,846,555	-		CCNA_02693	0.25	+1.2
2,846,582	-		CCNA_02693	0.27	+1.5
2,846,589	+		CCNA_02693	0.27	+0.8
2,846,597	-		CCNA_02693	0.27	+1.0
2,846,619	-		CCNA_02693	0.28	-0.7
2,846,641	-		CCNA_02693	0.30	-2.7
2,846,656	-		CCNA_02693	0.30	+0.2
2,846,657	-		CCNA_02693	0.30	+1.9
2,846,664	-		CCNA_02693	0.31	-1.9
2,846,665	+		CCNA_02693	0.31	+2.8
2,846,721	-		CCNA_02693	0.34	-1.2
2,846,738	-		CCNA_02693	0.35	+2.2
2,846,752	+		CCNA_02693	0.35	+2.8
2,846,755	-		CCNA_02693	0.35	-1.2
2,846,768	+		CCNA_02693	0.36	+0.5
2,846,790	-		CCNA_02693	0.37	-0.5
2,846,840	+		CCNA_02693	0.40	+0.5
2,846,847	-		CCNA_02693	0.40	+3.1
2,846,848	-		CCNA_02693	0.40	+0.0
2,846,854	-		CCNA_02693	0.41	+1.8
2,846,857	+		CCNA_02693	0.41	-0.0
2,846,885	+		CCNA_02693	0.42	-1.0
2,846,908	+		CCNA_02693	0.43	-1.4
2,847,052	-		CCNA_02693	0.51	+0.5
2,847,075	+		CCNA_02693	0.52	-0.2
2,847,088	-		CCNA_02693	0.52	-0.3
2,847,095	-		CCNA_02693	0.53	-2.2
2,847,126	-		CCNA_02693	0.54	-1.3
2,847,223	-		CCNA_02693	0.59	+0.8
2,847,278	+		CCNA_02693	0.62	+1.8
2,847,319	-		CCNA_02693	0.64	+1.7
2,847,360	+		CCNA_02693	0.66	+1.5
2,847,368	+		CCNA_02693	0.67	-1.2
2,847,368	-		CCNA_02693	0.67	-2.2
2,847,387	-		CCNA_02693	0.68	-1.0
2,847,389	+		CCNA_02693	0.68	-2.6
2,847,413	-		CCNA_02693	0.69	-2.1
2,847,418	+		CCNA_02693	0.69	-0.4
2,847,423	+		CCNA_02693	0.70	-2.1
2,847,423	+		CCNA_02693	0.70	-2.2
2,847,423	+		CCNA_02693	0.70	-1.7
2,847,423	+		CCNA_02693	0.70	-1.5
2,847,431	-		CCNA_02693	0.70	-2.2
2,847,431	-		CCNA_02693	0.70	-0.7
2,847,439	+		CCNA_02693	0.70	-2.7
2,847,458	-		CCNA_02693	0.71	+0.0
2,847,458	-		CCNA_02693	0.71	+1.4
2,847,484	-		CCNA_02693	0.73	+1.4
2,847,492	+		CCNA_02693	0.73	+1.8
2,847,492	+		CCNA_02693	0.73	+0.6
2,847,499	-		CCNA_02693	0.74	+2.8
2,847,500	-		CCNA_02693	0.74	-1.9
2,847,568	-		CCNA_02693	0.77	+0.8
2,847,573	+		CCNA_02693	0.77	-2.2
2,847,619	-		CCNA_02693	0.80	-1.0
2,847,676	-		CCNA_02693	0.83	-0.4
2,847,731	+		CCNA_02693	0.85	-0.0
2,847,739	-		CCNA_02693	0.86	-1.9
2,847,748	+		CCNA_02693	0.86	-0.9
2,847,748	+		CCNA_02693	0.86	-0.0
2,847,748	+		CCNA_02693	0.86	+0.2
2,847,756	-		CCNA_02693	0.87	+0.2
2,847,779	-		CCNA_02693	0.88	-2.3
2,847,790	-		CCNA_02693	0.88	-0.0
2,847,805	-		CCNA_02693	0.89	-0.0
2,847,844	+				-1.5
2,847,852	-				+0.5
2,847,852	-				-0.2
2,847,874	-				-0.9
2,847,892	-				-1.2
2,847,936	-				+0.5
2,847,972	-				+0.5
2,848,004	+				-1.8
2,848,012	-				-0.8
2,848,012	-				+5.8
2,848,012	-				-0.0
2,848,053	+				-1.7
2,848,077	+				-0.0
2,848,211	-				-1.8
2,848,211	-				+0.5
2,848,242	+				-0.2
2,848,242	+				+1.2
2,848,242	+				-0.2
2,848,250	-				-1.7
2,848,286	+				-0.5
2,848,307	-				-0.5
2,848,373	+		CCNA_02694	0.10	-1.9
2,848,373	+		CCNA_02694	0.10	-3.3
2,848,384	+		CCNA_02694	0.11	-0.0
2,848,418	+		CCNA_02694	0.15	-0.0
2,848,423	+		CCNA_02694	0.16	+2.8
2,848,436	-		CCNA_02694	0.17	+2.8
2,848,446	+		CCNA_02694	0.18	+0.3
2,848,446	+		CCNA_02694	0.18	+0.5
2,848,446	+		CCNA_02694	0.18	-0.4
2,848,447	+		CCNA_02694	0.18	-0.4
2,848,447	+		CCNA_02694	0.18	-0.8
2,848,454	-		CCNA_02694	0.19	+0.2
2,848,455	-		CCNA_02694	0.19	+1.8
2,848,455	-		CCNA_02694	0.19	-0.9
2,848,468	+		CCNA_02694	0.20	-0.2
2,848,476	-		CCNA_02694	0.21	-2.5
2,848,511	-		CCNA_02694	0.25	-2.0
2,848,551	+		CCNA_02694	0.29	-1.2
2,848,564	+		CCNA_02694	0.30	-0.4
2,848,566	-		CCNA_02694	0.30	+2.8
2,848,573	-		CCNA_02694	0.31	-0.0
2,848,583	-		CCNA_02694	0.32	-2.9
2,848,589	-		CCNA_02694	0.33	+2.8
2,848,590	+		CCNA_02694	0.33	+0.1
2,848,695	+		CCNA_02694	0.44	+2.8
2,848,703	-		CCNA_02694	0.45	+1.2
2,848,736	+		CCNA_02694	0.48	+2.8
2,848,739	-		CCNA_02694	0.48	+0.9
2,848,756	-		CCNA_02694	0.50	-1.0
2,848,756	-		CCNA_02694	0.50	-1.5
2,848,768	-		CCNA_02694	0.51	+0.8
2,848,775	-		CCNA_02694	0.52	-1.7
2,848,775	-		CCNA_02694	0.52	-0.2
2,848,806	+		CCNA_02694	0.55	+0.7
2,848,868	-		CCNA_02694	0.62	-1.2
2,848,883	+		CCNA_02694	0.63	+2.8
2,848,891	-		CCNA_02694	0.64	-0.8
2,848,891	-		CCNA_02694	0.64	-1.8
2,848,895	+		CCNA_02694	0.64	+0.8
2,848,895	+		CCNA_02694	0.64	+1.2
2,848,895	+		CCNA_02694	0.64	-0.2
2,848,903	-		CCNA_02694	0.65	-0.9
2,848,924	-		CCNA_02694	0.67	+1.2
2,848,970	-		CCNA_02694	0.72	-2.5
2,848,993	-		CCNA_02694	0.75	+0.0