Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02050

Experiment: PYE_noCalcium 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 30C survival rep2 28 days
2,196,427	-		CCNA_02048	0.84	-0.9
2,196,432	+		CCNA_02048	0.84	+1.5
2,196,432	+		CCNA_02048	0.84	+0.4
2,196,432	+		CCNA_02048	0.84	+0.1
2,196,432	+		CCNA_02048	0.84	+0.5
2,196,437	+		CCNA_02048	0.84	+1.4
2,196,437	+		CCNA_02048	0.84	+0.4
2,196,437	+		CCNA_02048	0.84	+1.4
2,196,440	-		CCNA_02048	0.84	-0.6
2,196,445	-		CCNA_02048	0.85	-1.1
2,196,465	+		CCNA_02048	0.85	+1.1
2,196,467	+		CCNA_02048	0.86	-0.2
2,196,467	+		CCNA_02048	0.86	+0.3
2,196,475	-		CCNA_02048	0.86	-1.3
2,196,499	+		CCNA_02048	0.87	+1.3
2,196,504	+		CCNA_02048	0.87	+0.6
2,196,522	+		CCNA_02048	0.88	-0.9
2,196,522	-		CCNA_02048	0.88	-1.7
2,196,538	+		CCNA_02048	0.89	+1.2
2,196,546	+		CCNA_02048	0.89	+1.8
2,196,546	+		CCNA_02048	0.89	+0.6
2,196,546	+		CCNA_02048	0.89	+1.1
2,196,546	+		CCNA_02048	0.89	+0.5
2,196,546	+		CCNA_02048	0.89	+1.2
2,196,546	+		CCNA_02048	0.89	+1.5
2,196,551	+		CCNA_02048	0.89	-0.6
2,196,551	+		CCNA_02048	0.89	+1.0
2,196,551	+		CCNA_02048	0.89	+0.4
2,196,554	-		CCNA_02048	0.90	-1.1
2,196,554	-		CCNA_02048	0.90	-1.8
2,196,556	+		CCNA_02048	0.90	-0.1
2,196,556	+		CCNA_02048	0.90	+1.5
2,196,556	+		CCNA_02048	0.90	-0.0
2,196,556	+		CCNA_02048	0.90	+0.9
2,196,556	+		CCNA_02048	0.90	+0.8
2,196,556	+		CCNA_02048	0.90	+0.3
2,196,556	+		CCNA_02048	0.90	+0.6
2,196,556	+		CCNA_02048	0.90	+0.9
2,196,559	-		CCNA_02048	0.90	+0.1
2,196,561	+		CCNA_02048	0.90	-1.6
2,196,564	-		CCNA_02048	0.90	+0.1
2,196,564	-		CCNA_02048	0.90	-0.8
2,196,564	-		CCNA_02048	0.90	+2.9
2,196,564	-		CCNA_02048	0.90	+0.9
2,196,564	-		CCNA_02048	0.90	-0.3
2,196,564	-		CCNA_02048	0.90	+1.3
2,196,571	-				-0.4
2,196,586	-				-2.6
2,196,615	+				+0.5
2,196,624	-				+0.9
2,196,624	-				-1.8
2,196,626	+				+0.7
2,196,695	+				+0.3
2,196,711	-				-0.4
2,196,713	-				-1.0
2,196,776	+				+0.3
2,196,776	+				+1.2
2,196,784	-				+0.3
2,196,784	-				+0.9
2,196,804	+				+1.2
2,196,894	+				-1.6
2,196,902	-		CCNA_02049	0.11	-0.1
2,196,902	-		CCNA_02049	0.11	+0.8
2,196,910	-		CCNA_02049	0.13	-1.6
2,196,965	-		CCNA_02049	0.27	+1.3
2,196,995	+		CCNA_02049	0.34	+0.7
2,196,996	+		CCNA_02049	0.34	-0.6
2,196,996	+		CCNA_02049	0.34	+2.9
2,197,004	-		CCNA_02049	0.36	+0.5
2,197,004	-		CCNA_02049	0.36	-1.4
2,197,020	+		CCNA_02049	0.40	-0.7
2,197,021	+		CCNA_02049	0.41	+0.9
2,197,031	+		CCNA_02049	0.43	+2.9
2,197,039	-		CCNA_02049	0.45	-0.5
2,197,044	-		CCNA_02049	0.46	-1.1
2,197,055	+		CCNA_02049	0.49	-0.6
2,197,062	-		CCNA_02049	0.51	+0.6
2,197,121	-		CCNA_02049	0.66	-0.1
2,197,151	+		CCNA_02049	0.73	-1.6
2,197,151	-		CCNA_02049	0.73	+0.8
2,197,250	+				-2.1
2,197,358	-				-1.6
2,197,404	+				-0.5
2,197,412	-				+0.1
2,197,412	-				+1.9
2,197,412	-				-0.8
2,197,412	-				-2.0
2,197,462	+				-1.0
2,197,476	+				+1.4
2,197,484	-				+1.3
2,197,484	-				+0.2
2,197,537	-				+0.9
2,197,537	-				-0.1
2,197,553	+				+0.6
2,197,553	+				-0.7
2,197,556	-				-1.2
2,197,565	+				+0.4
2,197,571	+				-0.8
2,197,572	+		CCNA_02050	0.10	+0.6
2,197,572	+		CCNA_02050	0.10	+1.3
2,197,579	-		CCNA_02050	0.10	+1.3
2,197,609	+		CCNA_02050	0.13	+0.1
2,197,651	+		CCNA_02050	0.15	+0.8
2,197,656	+		CCNA_02050	0.16	+0.9
2,197,749	-		CCNA_02050	0.22	-0.4
2,197,764	-		CCNA_02050	0.23	+1.9
2,197,774	-		CCNA_02050	0.24	-3.5
2,197,786	-		CCNA_02050	0.25	+5.7
2,197,796	+		CCNA_02050	0.25	+1.6
2,197,827	-		CCNA_02050	0.27	-3.2
2,197,888	-		CCNA_02050	0.31	-1.7
2,197,888	-		CCNA_02050	0.31	+0.9
2,197,890	+		CCNA_02050	0.32	-1.4
2,197,895	+		CCNA_02050	0.32	-1.6
2,197,895	+		CCNA_02050	0.32	+2.2
2,197,895	+		CCNA_02050	0.32	+0.2
2,197,895	+		CCNA_02050	0.32	+2.0
2,197,895	+		CCNA_02050	0.32	+0.0
2,197,895	+		CCNA_02050	0.32	+0.1
2,197,895	+		CCNA_02050	0.32	+0.8
2,197,895	+		CCNA_02050	0.32	+2.4
2,197,895	+		CCNA_02050	0.32	-3.0
2,197,895	+		CCNA_02050	0.32	+1.9
2,197,895	+		CCNA_02050	0.32	+1.4
2,197,895	+		CCNA_02050	0.32	+1.7
2,197,895	+		CCNA_02050	0.32	+0.9
2,197,895	+		CCNA_02050	0.32	+1.3
2,197,898	-		CCNA_02050	0.32	-2.3
2,197,898	-		CCNA_02050	0.32	+3.2
2,197,898	-		CCNA_02050	0.32	+0.3
2,197,903	-		CCNA_02050	0.33	-1.6
2,197,903	-		CCNA_02050	0.33	-0.6
2,197,903	-		CCNA_02050	0.33	+0.9
2,197,903	-		CCNA_02050	0.33	-1.2
2,197,903	-		CCNA_02050	0.33	+1.0
2,197,903	-		CCNA_02050	0.33	-1.0
2,197,903	-		CCNA_02050	0.33	+0.1
2,197,903	-		CCNA_02050	0.33	-1.3
2,197,903	-		CCNA_02050	0.33	-0.8
2,197,940	-		CCNA_02050	0.35	-1.6
2,197,940	-		CCNA_02050	0.35	-0.3
2,197,959	+		CCNA_02050	0.36	+1.8
2,198,057	+		CCNA_02050	0.43	-0.9
2,198,069	+		CCNA_02050	0.44	-0.5
2,198,077	+		CCNA_02050	0.44	+0.3
2,198,077	+		CCNA_02050	0.44	-0.3
2,198,102	+		CCNA_02050	0.46	+0.3
2,198,110	-		CCNA_02050	0.47	-1.6
2,198,110	-		CCNA_02050	0.47	-0.3
2,198,119	-		CCNA_02050	0.47	-0.3
2,198,122	+		CCNA_02050	0.47	-0.7
2,198,175	+		CCNA_02050	0.51	-2.1
2,198,222	+		CCNA_02050	0.54	+2.9
2,198,246	-		CCNA_02050	0.56	-0.4
2,198,292	+		CCNA_02050	0.59	+0.3
2,198,302	-		CCNA_02050	0.60	-0.3
2,198,414	+		CCNA_02050	0.67	+2.5
2,198,414	+		CCNA_02050	0.67	+1.7
2,198,425	+		CCNA_02050	0.68	-0.6
2,198,433	-		CCNA_02050	0.69	+0.9
2,198,455	-		CCNA_02050	0.70	+0.3
2,198,498	+		CCNA_02050	0.73	-1.9
2,198,558	-		CCNA_02050	0.77	+1.3
2,198,563	-		CCNA_02050	0.77	-2.2
2,198,589	+		CCNA_02050	0.79	-0.0
2,198,620	+		CCNA_02050	0.81	-2.7
2,198,695	-		CCNA_02050	0.86	+2.9
2,198,734	-		CCNA_02050	0.89	-1.3
2,198,748	+				-0.1
2,198,792	+				-0.8
2,198,793	+				-1.1
2,198,823	+				-1.1
2,198,829	+				+0.9
2,198,837	+				+0.5
2,198,873	+				+2.0
2,198,875	+				+1.2
2,198,883	+				+1.4
2,198,883	+				+2.0
2,198,906	-				-2.6
2,198,930	+				-0.9
2,198,930	+				+1.5
2,198,980	+				-0.1
2,199,107	+		CCNA_02051	0.16	-2.1
2,199,122	-		CCNA_02051	0.17	-0.6
2,199,143	-		CCNA_02051	0.18	+0.9
2,199,150	+		CCNA_02051	0.19	+1.6
2,199,152	+		CCNA_02051	0.19	+0.7
2,199,152	+		CCNA_02051	0.19	-0.6
2,199,157	+		CCNA_02051	0.19	+1.3
2,199,165	-		CCNA_02051	0.20	-0.1
2,199,231	+		CCNA_02051	0.25	+1.2
2,199,241	+		CCNA_02051	0.26	+0.4
2,199,252	+		CCNA_02051	0.26	+1.7
2,199,265	-		CCNA_02051	0.27	-0.4
2,199,297	+		CCNA_02051	0.30	-1.7
2,199,315	-		CCNA_02051	0.31	+0.6
2,199,354	-		CCNA_02051	0.34	-0.6
2,199,532	+		CCNA_02051	0.47	+2.0
2,199,546	+		CCNA_02051	0.48	-0.0
2,199,551	+		CCNA_02051	0.49	+0.5
2,199,551	+		CCNA_02051	0.49	-1.1
2,199,551	+		CCNA_02051	0.49	+1.1
2,199,551	+		CCNA_02051	0.49	+0.5
2,199,551	+		CCNA_02051	0.49	-0.3
2,199,551	+		CCNA_02051	0.49	+2.3
2,199,559	-		CCNA_02051	0.49	-2.7
2,199,563	+		CCNA_02051	0.49	-0.1
2,199,664	+		CCNA_02051	0.57	+1.0
2,199,664	+		CCNA_02051	0.57	+0.9
2,199,664	+		CCNA_02051	0.57	+0.8
2,199,672	-		CCNA_02051	0.58	-3.9
2,199,672	-		CCNA_02051	0.58	-0.4
2,199,672	-				-0.4
2,199,672	-		CCNA_02051	0.58	+1.2
2,199,685	-		CCNA_02051	0.58	-1.4
2,199,707	-		CCNA_02051	0.60	+0.9
2,199,726	-		CCNA_02051	0.61	-0.8
2,199,742	+		CCNA_02051	0.63	-1.5
2,199,742	+		CCNA_02051	0.63	+1.4
2,199,764	+		CCNA_02051	0.64	-2.5
2,199,770	-		CCNA_02051	0.65	-1.8
2,199,774	+		CCNA_02051	0.65	+0.6
2,199,820	-		CCNA_02051	0.68	+0.3
2,199,844	-		CCNA_02051	0.70	-1.2
2,199,869	+		CCNA_02051	0.72	+1.4