Strain Fitness in Caulobacter crescentus NA1000 around CCNA_01363

Experiment: PYE_noCalcium 30C survival rep2 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE_noCalcium 30C survival rep2 28 days
1,477,577	+				+0.9
1,477,662	+		CCNA_01361	0.26	-1.7
1,477,780	+		CCNA_01361	0.60	-4.3
1,477,793	-		CCNA_01361	0.64	-2.1
1,477,801	+		CCNA_01361	0.66	-2.0
1,477,892	+				-1.2
1,477,892	+				-1.3
1,477,909	+				+1.2
1,477,951	+				+0.3
1,477,951	+				+1.9
1,478,025	+		CCNA_01362	0.17	+0.3
1,478,033	-		CCNA_01362	0.18	+2.9
1,478,038	+		CCNA_01362	0.19	-0.8
1,478,175	+		CCNA_01362	0.39	-0.6
1,478,183	-		CCNA_01362	0.41	-1.2
1,478,202	+		CCNA_01362	0.43	-1.2
1,478,275	-		CCNA_01362	0.54	+0.4
1,478,283	-		CCNA_01362	0.55	+2.5
1,478,287	+		CCNA_01362	0.56	+1.0
1,478,333	+		CCNA_01362	0.63	-1.1
1,478,333	-		CCNA_01362	0.63	-0.3
1,478,338	+		CCNA_01362	0.64	-0.1
1,478,338	+		CCNA_01362	0.64	-0.6
1,478,338	+		CCNA_01362	0.64	-1.8
1,478,338	+		CCNA_01362	0.64	-0.4
1,478,346	-		CCNA_01362	0.65	-1.6
1,478,405	+		CCNA_01362	0.74	+0.7
1,478,443	+		CCNA_01362	0.79	+1.9
1,478,445	+		CCNA_01362	0.80	-1.8
1,478,445	+		CCNA_01362	0.80	-0.7
1,478,445	+		CCNA_01362	0.80	+0.5
1,478,445	+		CCNA_01362	0.80	-1.2
1,478,445	+		CCNA_01362	0.80	-0.2
1,478,445	+		CCNA_01362	0.80	-3.3
1,478,445	+		CCNA_01362	0.80	+2.6
1,478,445	+		CCNA_01362	0.80	+1.9
1,478,445	+		CCNA_01362	0.80	-2.1
1,478,453	-		CCNA_01362	0.81	-1.5
1,478,453	-		CCNA_01362	0.81	-0.3
1,478,453	-		CCNA_01362	0.81	+0.7
1,478,453	-		CCNA_01362	0.81	+0.6
1,478,453	-		CCNA_01362	0.81	-1.6
1,478,480	-		CCNA_01362	0.85	+0.5
1,478,514	+				-0.7
1,478,530	+				-2.3
1,478,545	+				+1.0
1,478,545	+				+0.3
1,478,553	-				-0.3
1,478,594	-				-2.0
1,478,709	-				-2.1
1,478,709	-				-1.4
1,478,721	+		CCNA_01363	0.11	-1.6
1,478,729	-		CCNA_01363	0.11	+0.9
1,478,729	-		CCNA_01363	0.11	-1.3
1,478,729	-		CCNA_01363	0.11	+0.9
1,478,789	-		CCNA_01363	0.16	+2.9
1,478,841	+		CCNA_01363	0.19	-2.2
1,478,907	+		CCNA_01363	0.24	-0.8
1,478,915	-		CCNA_01363	0.25	-1.8
1,478,972	-		CCNA_01363	0.29	+2.9
1,478,982	-		CCNA_01363	0.30	-1.3
1,479,081	-		CCNA_01363	0.37	+2.9
1,479,088	+		CCNA_01363	0.38	-2.8
1,479,126	+		CCNA_01363	0.40	-1.4
1,479,144	+		CCNA_01363	0.42	-1.3
1,479,144	+		CCNA_01363	0.42	-2.5
1,479,144	+		CCNA_01363	0.42	-2.5
1,479,144	+		CCNA_01363	0.42	-0.9
1,479,144	+		CCNA_01363	0.42	+0.1
1,479,144	+		CCNA_01363	0.42	-2.0
1,479,152	-		CCNA_01363	0.42	+0.6
1,479,152	-		CCNA_01363	0.42	-0.7
1,479,152	-		CCNA_01363	0.42	-0.3
1,479,173	-		CCNA_01363	0.44	+1.1
1,479,174	+		CCNA_01363	0.44	-1.0
1,479,276	+		CCNA_01363	0.51	-2.4
1,479,276	+		CCNA_01363	0.51	-1.7
1,479,276	+		CCNA_01363	0.51	-1.2
1,479,284	-		CCNA_01363	0.52	-2.1
1,479,284	-		CCNA_01363	0.52	-0.4
1,479,284	-		CCNA_01363	0.52	-2.1
1,479,284	-		CCNA_01363	0.52	-0.3
1,479,284	-		CCNA_01363	0.52	-0.1
1,479,284	-		CCNA_01363	0.52	+2.9
1,479,356	-		CCNA_01363	0.57	+1.9
1,479,366	+		CCNA_01363	0.58	-0.1
1,479,396	+		CCNA_01363	0.60	+0.8
1,479,439	-		CCNA_01363	0.63	-2.1
1,479,441	+		CCNA_01363	0.64	-1.3
1,479,501	+		CCNA_01363	0.68	+2.9
1,479,501	+		CCNA_01363	0.68	-1.2
1,479,506	+		CCNA_01363	0.68	-1.9
1,479,547	+		CCNA_01363	0.71	-0.4
1,479,691	+		CCNA_01363	0.82	-2.7
1,479,706	+		CCNA_01363	0.83	-2.3
1,479,706	+		CCNA_01363	0.83	-2.3
1,479,706	+		CCNA_01363	0.83	-1.0
1,479,711	+		CCNA_01363	0.83	-2.1
1,479,719	-		CCNA_01363	0.84	-1.4
1,479,738	+		CCNA_01363	0.85	+0.5
1,479,741	-		CCNA_01363	0.86	+1.3
1,479,741	-		CCNA_01363	0.86	-2.7
1,479,744	+		CCNA_01363	0.86	-2.4
1,479,744	+		CCNA_01363	0.86	-0.2
1,479,746	-		CCNA_01363	0.86	+1.3
1,479,754	+		CCNA_01363	0.87	-1.1
1,479,786	-		CCNA_01363	0.89	+1.0
1,479,792	-		CCNA_01363	0.89	+1.3
1,479,799	+		CCNA_01363	0.90	-2.6
1,479,810	+				-1.6
1,479,811	+				-0.5
1,479,811	+				-2.8
1,479,811	+				+2.9
1,479,818	-				+0.9
1,479,819	-				+0.7
1,479,819	-				-0.1
1,479,845	+				-0.8
1,479,858	+				-0.7
1,479,866	-				-0.6
1,479,879	+				-0.9
1,479,887	-				-0.8
1,479,887	-				-1.3
1,479,905	+				-1.6
1,479,905	+				+2.5
1,479,913	-				-1.7
1,479,917	+				-1.6
1,479,925	-				-2.5
1,479,936	-				+1.6
1,479,937	+				-1.8
1,479,992	+				-2.3
1,479,992	+				-0.3
1,480,001	+				-0.7
1,480,009	+				+2.9
1,480,049	+				+2.9
1,480,049	+				+0.4
1,480,068	-				+1.9
1,480,068	-				+0.9
1,480,083	-				+1.9
1,480,098	+				-0.8
1,480,099	+				-2.4
1,480,099	+				+0.2
1,480,107	-				-0.3
1,480,107	-				+0.1
1,480,144	-				-0.8
1,480,146	+				-0.9
1,480,147	+				+0.9
1,480,154	-				+1.5
1,480,154	-				+0.3
1,480,224	+				+0.8
1,480,237	-				+0.9
1,480,245	-				+2.9
1,480,261	+				+0.4
1,480,276	+		CCNA_01364	0.11	+0.5
1,480,276	+				-0.7
1,480,276	+		CCNA_01364	0.11	-1.6
1,480,276	+		CCNA_01364	0.11	+2.5
1,480,276	+		CCNA_01364	0.11	+2.0
1,480,276	+		CCNA_01364	0.11	-1.6
1,480,276	+		CCNA_01364	0.11	+1.8
1,480,276	+		CCNA_01364	0.11	+2.2
1,480,281	+		CCNA_01364	0.11	+3.9
1,480,284	-		CCNA_01364	0.12	+0.9
1,480,284	-		CCNA_01364	0.12	+1.5
1,480,284	-		CCNA_01364	0.12	+0.1
1,480,284	-		CCNA_01364	0.12	+2.0
1,480,284	-		CCNA_01364	0.12	+0.4
1,480,284	-		CCNA_01364	0.12	-0.3
1,480,284	-		CCNA_01364	0.12	+4.0
1,480,302	+		CCNA_01364	0.13	+0.6
1,480,302	+		CCNA_01364	0.13	-0.8
1,480,310	+		CCNA_01364	0.14	+0.9
1,480,338	+		CCNA_01364	0.17	-0.8
1,480,338	+		CCNA_01364	0.17	+0.6
1,480,338	+		CCNA_01364	0.17	-0.2
1,480,338	+		CCNA_01364	0.17	+1.9
1,480,338	+		CCNA_01364	0.17	-0.5
1,480,344	+		CCNA_01364	0.17	-0.6
1,480,346	-		CCNA_01364	0.18	+2.1
1,480,346	-		CCNA_01364	0.18	-0.9
1,480,346	-		CCNA_01364	0.18	-2.7
1,480,346	-		CCNA_01364	0.18	-1.1
1,480,346	-		CCNA_01364	0.18	-0.7
1,480,388	-		CCNA_01364	0.22	+2.9
1,480,439	-		CCNA_01364	0.27	-0.3
1,480,447	+		CCNA_01364	0.27	+0.6
1,480,474	+		CCNA_01364	0.30	-0.8
1,480,520	-		CCNA_01364	0.35	-1.3
1,480,520	-		CCNA_01364	0.35	+1.9
1,480,533	+		CCNA_01364	0.36	+0.2
1,480,620	+		CCNA_01364	0.44	-0.1
1,480,654	+		CCNA_01364	0.48	+0.9
1,480,662	+		CCNA_01364	0.48	+2.5
1,480,662	-		CCNA_01364	0.48	+1.3
1,480,691	-		CCNA_01364	0.51	-2.6
1,480,747	+		CCNA_01364	0.57	+0.8
1,480,747	+		CCNA_01364	0.57	+0.2
1,480,747	+		CCNA_01364	0.57	+1.2
1,480,755	-		CCNA_01364	0.57	-1.8
1,480,775	+		CCNA_01364	0.59	+0.2
1,480,783	-		CCNA_01364	0.60	+1.3
1,480,783	-		CCNA_01364	0.60	+2.9
1,480,783	-		CCNA_01364	0.60	-0.8
1,480,783	-		CCNA_01364	0.60	-2.4
1,480,783	-		CCNA_01364	0.60	+1.9
1,480,800	-		CCNA_01364	0.62	-2.0
1,480,807	-		CCNA_01364	0.62	-2.3
1,480,812	-		CCNA_01364	0.63	+0.3
1,480,828	-		CCNA_01364	0.65	+0.3
1,480,834	+		CCNA_01364	0.65	+1.1
1,480,834	+		CCNA_01364	0.65	+0.8
1,480,849	-		CCNA_01364	0.67	-1.2
1,480,851	+		CCNA_01364	0.67	+1.6
1,480,914	+		CCNA_01364	0.73	+0.8