Experiment: Pyruvate-Sulfite (60-20mM) with Selenate 750uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0598 and DVU0599 are separated by 326 nucleotides DVU0599 and ldh are separated by 297 nucleotides
DVU0598: DVU0598 - carbon starvation protein A, putative (TIGR), at 667,290 to 668,711
DVU0598
DVU0599: DVU0599 - carbon starvation protein A, putative (TIGR), at 669,038 to 670,459
DVU0599
DVU0600: ldh - L-lactate dehydrogenase (TIGR), at 670,757 to 671,686
ldh
Position (kb) 669
670
671 Strain fitness (log2 ratio) -2
-1
0
1
2 at 668.357 kb on + strand, within DVU0598 at 668.357 kb on + strand, within DVU0598 at 668.561 kb on - strand, within DVU0598 at 668.561 kb on - strand, within DVU0598 at 668.743 kb on - strand at 668.815 kb on - strand at 668.853 kb on - strand at 669.077 kb on - strand at 669.095 kb on + strand at 669.095 kb on + strand at 669.095 kb on + strand at 669.095 kb on + strand at 669.180 kb on + strand at 669.223 kb on - strand, within DVU0599 at 669.247 kb on + strand, within DVU0599 at 669.274 kb on - strand, within DVU0599 at 669.279 kb on - strand, within DVU0599 at 669.287 kb on + strand, within DVU0599 at 669.297 kb on - strand, within DVU0599 at 669.421 kb on + strand, within DVU0599 at 669.421 kb on + strand, within DVU0599 at 669.510 kb on + strand, within DVU0599 at 669.511 kb on + strand, within DVU0599 at 669.566 kb on + strand, within DVU0599 at 669.566 kb on + strand, within DVU0599 at 669.626 kb on - strand, within DVU0599 at 669.638 kb on + strand, within DVU0599 at 669.667 kb on - strand, within DVU0599 at 669.672 kb on - strand, within DVU0599 at 669.673 kb on + strand, within DVU0599 at 669.679 kb on - strand, within DVU0599 at 670.102 kb on + strand, within DVU0599 at 670.157 kb on - strand, within DVU0599 at 670.454 kb on + strand at 670.462 kb on - strand at 670.468 kb on - strand at 670.527 kb on + strand at 670.542 kb on + strand at 670.547 kb on - strand at 670.552 kb on + strand at 670.560 kb on - strand at 670.560 kb on - strand at 670.622 kb on + strand at 670.640 kb on - strand at 670.706 kb on - strand at 670.712 kb on - strand at 670.742 kb on + strand at 670.759 kb on + strand at 670.839 kb on + strand at 670.855 kb on + strand, within ldh at 670.863 kb on - strand, within ldh at 670.876 kb on + strand, within ldh at 670.902 kb on - strand, within ldh at 670.930 kb on - strand, within ldh at 670.941 kb on + strand, within ldh at 670.951 kb on + strand, within ldh at 670.953 kb on + strand, within ldh at 671.037 kb on - strand, within ldh at 671.074 kb on - strand, within ldh at 671.128 kb on - strand, within ldh at 671.128 kb on - strand, within ldh at 671.186 kb on + strand, within ldh at 671.194 kb on - strand, within ldh at 671.232 kb on + strand, within ldh at 671.256 kb on + strand, within ldh at 671.281 kb on + strand, within ldh at 671.291 kb on + strand, within ldh at 671.384 kb on + strand, within ldh at 671.384 kb on + strand, within ldh at 671.384 kb on + strand, within ldh at 671.384 kb on + strand, within ldh at 671.433 kb on + strand, within ldh at 671.441 kb on + strand, within ldh
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfite (60-20mM) with Selenate 750uM remove 668,357 + DVU0598 0.75 -0.5 668,357 + DVU0598 0.75 +0.0 668,561 - DVU0598 0.89 -0.1 668,561 - DVU0598 0.89 -0.1 668,743 - -0.1 668,815 - +0.0 668,853 - +0.7 669,077 - -1.8 669,095 + -0.1 669,095 + -1.7 669,095 + -1.8 669,095 + -1.3 669,180 + -1.3 669,223 - DVU0599 0.13 -2.1 669,247 + DVU0599 0.15 -0.2 669,274 - DVU0599 0.17 -1.8 669,279 - DVU0599 0.17 -1.1 669,287 + DVU0599 0.18 -2.3 669,297 - DVU0599 0.18 -0.8 669,421 + DVU0599 0.27 -1.8 669,421 + DVU0599 0.27 -1.5 669,510 + DVU0599 0.33 -2.0 669,511 + DVU0599 0.33 -1.2 669,566 + DVU0599 0.37 -2.3 669,566 + DVU0599 0.37 -1.3 669,626 - DVU0599 0.41 -2.2 669,638 + DVU0599 0.42 -0.3 669,667 - DVU0599 0.44 -1.3 669,672 - DVU0599 0.45 -1.9 669,673 + DVU0599 0.45 -2.0 669,679 - DVU0599 0.45 -1.0 670,102 + DVU0599 0.75 -1.9 670,157 - DVU0599 0.79 -2.1 670,454 + -1.7 670,462 - -1.4 670,468 - -0.9 670,527 + -1.6 670,542 + -0.3 670,547 - +1.3 670,552 + -0.4 670,560 - -0.4 670,560 - -1.3 670,622 + -0.8 670,640 - +2.4 670,706 - -1.1 670,712 - +0.2 670,742 + -0.1 670,759 + -1.0 670,839 + +0.0 670,855 + ldh DVU0600 0.11 +0.1 670,863 - ldh DVU0600 0.11 -0.8 670,876 + ldh DVU0600 0.13 -1.0 670,902 - ldh DVU0600 0.16 -0.3 670,930 - ldh DVU0600 0.19 -0.6 670,941 + ldh DVU0600 0.20 -0.2 670,951 + ldh DVU0600 0.21 -1.1 670,953 + ldh DVU0600 0.21 -0.6 671,037 - ldh DVU0600 0.30 -0.8 671,074 - ldh DVU0600 0.34 -0.1 671,128 - ldh DVU0600 0.40 -0.7 671,128 - ldh DVU0600 0.40 +0.9 671,186 + ldh DVU0600 0.46 -1.0 671,194 - ldh DVU0600 0.47 -0.1 671,232 + ldh DVU0600 0.51 -0.1 671,256 + ldh DVU0600 0.54 +0.0 671,281 + ldh DVU0600 0.56 -0.1 671,291 + ldh DVU0600 0.57 -0.4 671,384 + ldh DVU0600 0.67 +0.1 671,384 + ldh DVU0600 0.67 -0.4 671,384 + ldh DVU0600 0.67 +1.5 671,384 + ldh DVU0600 0.67 -1.1 671,433 + ldh DVU0600 0.73 +1.5 671,441 + ldh DVU0600 0.74 -0.4
Or see this region's nucleotide sequence