Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_19490 and IAI47_19495 are separated by 549 nucleotides IAI47_19495 and IAI47_19500 are separated by 170 nucleotides IAI47_19500 and IAI47_19505 are separated by 442 nucleotides
IAI47_19490: IAI47_19490 - DUF4102 domain-containing protein, at 128,558 to 128,740
_19490
IAI47_19495: IAI47_19495 - hypothetical protein, at 129,290 to 129,571
_19495
IAI47_19500: IAI47_19500 - Insecticidal toxin complex protein tccz, at 129,742 to 130,122
_19500
IAI47_19505: IAI47_19505 - hypothetical protein, at 130,565 to 130,858
_19505
Position (kb) 129
130 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 128.322 kb on - strand at 128.332 kb on + strand at 128.332 kb on + strand at 128.333 kb on - strand at 128.333 kb on - strand at 128.333 kb on - strand at 128.334 kb on + strand at 128.334 kb on + strand at 128.334 kb on + strand at 128.334 kb on + strand at 128.334 kb on + strand at 128.335 kb on - strand at 128.335 kb on - strand at 128.336 kb on + strand at 128.336 kb on + strand at 128.336 kb on + strand at 128.337 kb on - strand at 128.346 kb on + strand at 128.346 kb on + strand at 128.347 kb on - strand at 128.347 kb on - strand at 128.382 kb on + strand at 128.384 kb on - strand at 128.384 kb on - strand at 128.385 kb on + strand at 128.386 kb on - strand at 128.397 kb on - strand at 128.424 kb on - strand at 128.440 kb on + strand at 128.483 kb on - strand at 128.488 kb on + strand at 128.488 kb on + strand at 128.489 kb on - strand at 128.492 kb on + strand at 128.492 kb on + strand at 128.492 kb on + strand at 128.492 kb on + strand at 128.493 kb on - strand at 128.493 kb on - strand at 128.493 kb on - strand at 128.493 kb on - strand at 128.493 kb on - strand at 128.493 kb on - strand at 128.493 kb on - strand at 128.493 kb on - strand at 128.493 kb on - strand at 128.500 kb on + strand at 128.500 kb on + strand at 128.500 kb on + strand at 128.500 kb on + strand at 128.500 kb on + strand at 128.501 kb on - strand at 128.501 kb on - strand at 128.501 kb on - strand at 128.501 kb on - strand at 128.501 kb on - strand at 128.501 kb on - strand at 128.501 kb on - strand at 128.504 kb on + strand at 128.504 kb on + strand at 128.504 kb on + strand at 128.504 kb on + strand at 128.505 kb on - strand at 128.527 kb on + strand at 128.527 kb on + strand at 128.527 kb on + strand at 128.527 kb on + strand at 128.527 kb on + strand at 128.528 kb on - strand at 128.528 kb on - strand at 128.528 kb on - strand at 128.528 kb on - strand at 128.528 kb on - strand at 128.528 kb on - strand at 128.528 kb on - strand at 128.530 kb on - strand at 128.573 kb on + strand at 128.574 kb on - strand at 128.574 kb on - strand at 128.610 kb on + strand, within IAI47_19490 at 128.610 kb on + strand, within IAI47_19490 at 128.611 kb on - strand, within IAI47_19490 at 128.611 kb on - strand, within IAI47_19490 at 128.611 kb on - strand, within IAI47_19490 at 128.629 kb on + strand, within IAI47_19490 at 128.652 kb on - strand, within IAI47_19490 at 128.699 kb on + strand, within IAI47_19490 at 128.699 kb on + strand, within IAI47_19490 at 128.699 kb on + strand, within IAI47_19490 at 128.699 kb on + strand, within IAI47_19490 at 128.699 kb on + strand, within IAI47_19490 at 128.699 kb on + strand, within IAI47_19490 at 128.699 kb on + strand, within IAI47_19490 at 128.699 kb on + strand, within IAI47_19490 at 128.699 kb on + strand, within IAI47_19490 at 128.700 kb on - strand, within IAI47_19490 at 128.700 kb on - strand, within IAI47_19490 at 128.700 kb on - strand, within IAI47_19490 at 128.700 kb on - strand, within IAI47_19490 at 128.700 kb on - strand, within IAI47_19490 at 128.700 kb on - strand, within IAI47_19490 at 128.700 kb on - strand, within IAI47_19490 at 128.712 kb on + strand, within IAI47_19490 at 128.713 kb on - strand, within IAI47_19490 at 128.713 kb on - strand, within IAI47_19490 at 128.738 kb on + strand at 128.762 kb on + strand at 128.762 kb on + strand at 128.842 kb on + strand at 128.842 kb on + strand at 128.842 kb on + strand at 128.843 kb on - strand at 128.843 kb on - strand at 128.856 kb on + strand at 128.857 kb on - strand at 128.867 kb on - strand at 128.867 kb on - strand at 128.893 kb on + strand at 128.893 kb on + strand at 128.893 kb on + strand at 128.894 kb on - strand at 128.902 kb on + strand at 128.909 kb on + strand at 128.911 kb on - strand at 128.950 kb on + strand at 128.950 kb on + strand at 129.078 kb on + strand at 129.186 kb on - strand at 129.186 kb on - strand at 129.313 kb on + strand at 129.314 kb on - strand at 129.349 kb on + strand, within IAI47_19495 at 129.349 kb on + strand, within IAI47_19495 at 129.350 kb on - strand, within IAI47_19495 at 129.350 kb on - strand, within IAI47_19495 at 129.354 kb on + strand, within IAI47_19495 at 129.354 kb on + strand, within IAI47_19495 at 129.355 kb on - strand, within IAI47_19495 at 129.364 kb on - strand, within IAI47_19495 at 129.443 kb on - strand, within IAI47_19495 at 129.448 kb on + strand, within IAI47_19495 at 129.448 kb on + strand, within IAI47_19495 at 129.448 kb on + strand, within IAI47_19495 at 129.449 kb on - strand, within IAI47_19495 at 129.449 kb on - strand, within IAI47_19495 at 129.449 kb on - strand, within IAI47_19495 at 129.453 kb on + strand, within IAI47_19495 at 129.453 kb on + strand, within IAI47_19495 at 129.453 kb on + strand, within IAI47_19495 at 129.453 kb on + strand, within IAI47_19495 at 129.454 kb on - strand, within IAI47_19495 at 129.454 kb on - strand, within IAI47_19495 at 129.493 kb on + strand, within IAI47_19495 at 129.493 kb on + strand, within IAI47_19495 at 129.493 kb on + strand, within IAI47_19495 at 129.494 kb on - strand, within IAI47_19495 at 129.494 kb on - strand, within IAI47_19495 at 129.494 kb on - strand, within IAI47_19495 at 129.505 kb on + strand, within IAI47_19495 at 129.505 kb on + strand, within IAI47_19495 at 129.506 kb on - strand, within IAI47_19495 at 129.506 kb on - strand, within IAI47_19495 at 129.527 kb on + strand, within IAI47_19495 at 129.528 kb on - strand, within IAI47_19495 at 129.561 kb on - strand at 129.563 kb on + strand at 129.563 kb on + strand at 129.563 kb on + strand at 129.564 kb on - strand at 129.564 kb on - strand at 129.579 kb on - strand at 129.624 kb on + strand at 129.624 kb on + strand at 129.625 kb on - strand at 129.625 kb on - strand at 129.625 kb on - strand at 129.649 kb on - strand at 129.669 kb on + strand at 129.669 kb on + strand at 129.669 kb on + strand at 129.670 kb on - strand at 129.670 kb on - strand at 129.672 kb on + strand at 129.673 kb on - strand at 129.673 kb on - strand at 129.673 kb on - strand at 129.673 kb on - strand at 129.676 kb on + strand at 129.676 kb on + strand at 129.676 kb on + strand at 129.676 kb on + strand at 129.676 kb on + strand at 129.677 kb on - strand at 129.679 kb on + strand at 129.679 kb on + strand at 129.680 kb on - strand at 129.680 kb on - strand at 129.680 kb on - strand at 129.680 kb on - strand at 129.680 kb on - strand at 129.693 kb on + strand at 129.693 kb on + strand at 129.694 kb on - strand at 129.694 kb on - strand at 129.694 kb on - strand at 129.699 kb on - strand at 129.718 kb on - strand at 129.719 kb on + strand at 129.720 kb on - strand at 129.748 kb on - strand at 129.748 kb on - strand at 129.754 kb on - strand at 129.767 kb on + strand at 129.768 kb on - strand at 129.768 kb on - strand at 129.788 kb on - strand, within IAI47_19500 at 129.788 kb on - strand, within IAI47_19500 at 129.788 kb on - strand, within IAI47_19500 at 129.788 kb on - strand, within IAI47_19500 at 129.822 kb on + strand, within IAI47_19500 at 129.843 kb on + strand, within IAI47_19500 at 129.843 kb on + strand, within IAI47_19500 at 129.843 kb on + strand, within IAI47_19500 at 129.843 kb on + strand, within IAI47_19500 at 129.843 kb on + strand, within IAI47_19500 at 129.844 kb on - strand, within IAI47_19500 at 129.844 kb on - strand, within IAI47_19500 at 129.846 kb on + strand, within IAI47_19500 at 129.847 kb on - strand, within IAI47_19500 at 129.872 kb on + strand, within IAI47_19500 at 129.872 kb on + strand, within IAI47_19500 at 129.872 kb on + strand, within IAI47_19500 at 129.873 kb on - strand, within IAI47_19500 at 129.875 kb on + strand, within IAI47_19500 at 129.875 kb on + strand, within IAI47_19500 at 129.875 kb on + strand, within IAI47_19500 at 129.879 kb on + strand, within IAI47_19500 at 129.880 kb on - strand, within IAI47_19500 at 129.891 kb on + strand, within IAI47_19500 at 129.891 kb on + strand, within IAI47_19500 at 129.892 kb on - strand, within IAI47_19500 at 129.989 kb on + strand, within IAI47_19500 at 130.019 kb on + strand, within IAI47_19500 at 130.032 kb on + strand, within IAI47_19500 at 130.033 kb on - strand, within IAI47_19500 at 130.040 kb on - strand, within IAI47_19500 at 130.049 kb on - strand, within IAI47_19500 at 130.050 kb on + strand, within IAI47_19500 at 130.051 kb on - strand, within IAI47_19500 at 130.116 kb on + strand at 130.116 kb on + strand at 130.117 kb on - strand at 130.140 kb on - strand at 130.156 kb on + strand at 130.157 kb on - strand at 130.158 kb on + strand at 130.173 kb on + strand at 130.174 kb on - strand at 130.174 kb on - strand at 130.203 kb on + strand at 130.211 kb on - strand at 130.250 kb on - strand at 130.260 kb on - strand at 130.260 kb on - strand at 130.283 kb on + strand at 130.343 kb on - strand at 130.343 kb on - strand at 130.343 kb on - strand at 130.346 kb on + strand at 130.346 kb on + strand at 130.346 kb on + strand at 130.346 kb on + strand at 130.346 kb on + strand at 130.347 kb on - strand at 130.347 kb on - strand at 130.386 kb on + strand at 130.386 kb on + strand at 130.485 kb on + strand at 130.494 kb on - strand at 130.510 kb on + strand at 130.510 kb on + strand at 130.510 kb on + strand at 130.511 kb on - strand at 130.542 kb on + strand at 130.542 kb on + strand at 130.542 kb on + strand at 130.542 kb on + strand at 130.543 kb on - strand at 130.543 kb on - strand at 130.543 kb on - strand at 130.543 kb on - strand at 130.543 kb on - strand at 130.543 kb on - strand at 130.543 kb on - strand at 130.563 kb on + strand at 130.563 kb on + strand at 130.564 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 128,322 - -1.2 128,332 + +1.3 128,332 + +2.4 128,333 - -1.5 128,333 - +0.5 128,333 - +1.5 128,334 + -0.3 128,334 + +0.8 128,334 + +0.7 128,334 + -0.8 128,334 + -0.0 128,335 - +0.5 128,335 - -0.6 128,336 + +0.0 128,336 + -0.3 128,336 + +1.8 128,337 - +1.6 128,346 + +0.6 128,346 + +0.8 128,347 - +0.6 128,347 - -0.1 128,382 + -0.1 128,384 - +0.3 128,384 - -1.1 128,385 + -1.3 128,386 - -0.4 128,397 - +0.9 128,424 - -0.3 128,440 + +1.8 128,483 - -0.1 128,488 + -1.3 128,488 + -1.3 128,489 - -0.8 128,492 + -0.8 128,492 + -0.4 128,492 + -1.2 128,492 + -1.0 128,493 - -0.3 128,493 - -1.1 128,493 - +0.0 128,493 - +0.8 128,493 - +0.0 128,493 - +0.7 128,493 - +0.6 128,493 - +1.8 128,493 - -0.2 128,500 + -0.5 128,500 + -0.1 128,500 + -2.6 128,500 + +1.0 128,500 + -1.6 128,501 - -0.5 128,501 - +0.7 128,501 - +1.0 128,501 - -0.5 128,501 - -1.5 128,501 - +0.5 128,501 - -0.5 128,504 + +1.8 128,504 + +0.9 128,504 + +1.2 128,504 + +0.6 128,505 - +1.4 128,527 + +0.4 128,527 + -0.2 128,527 + -0.3 128,527 + -0.7 128,527 + +0.4 128,528 - +1.0 128,528 - -0.3 128,528 - +0.7 128,528 - -0.8 128,528 - -0.4 128,528 - -1.7 128,528 - -2.1 128,530 - -0.8 128,573 + +0.5 128,574 - +0.9 128,574 - +0.8 128,610 + IAI47_19490 0.28 +0.0 128,610 + IAI47_19490 0.28 +0.7 128,611 - IAI47_19490 0.29 -0.6 128,611 - IAI47_19490 0.29 -0.9 128,611 - IAI47_19490 0.29 +0.2 128,629 + IAI47_19490 0.39 +2.2 128,652 - IAI47_19490 0.51 -0.9 128,699 + IAI47_19490 0.77 -0.8 128,699 + IAI47_19490 0.77 -0.6 128,699 + IAI47_19490 0.77 -0.3 128,699 + IAI47_19490 0.77 -0.2 128,699 + IAI47_19490 0.77 +0.8 128,699 + IAI47_19490 0.77 -0.6 128,699 + IAI47_19490 0.77 -0.5 128,699 + IAI47_19490 0.77 -0.4 128,699 + IAI47_19490 0.77 -0.5 128,700 - IAI47_19490 0.78 -1.1 128,700 - IAI47_19490 0.78 -0.3 128,700 - IAI47_19490 0.78 -1.8 128,700 - IAI47_19490 0.78 -1.9 128,700 - IAI47_19490 0.78 -1.1 128,700 - IAI47_19490 0.78 +0.5 128,700 - IAI47_19490 0.78 -0.9 128,712 + IAI47_19490 0.84 -0.9 128,713 - IAI47_19490 0.85 -0.9 128,713 - IAI47_19490 0.85 -0.6 128,738 + +0.5 128,762 + -1.9 128,762 + -0.4 128,842 + +2.4 128,842 + +0.3 128,842 + +0.2 128,843 - +0.8 128,843 - -0.2 128,856 + -1.0 128,857 - -0.1 128,867 - +0.1 128,867 - +0.9 128,893 + +1.7 128,893 + -2.1 128,893 + +1.4 128,894 - -1.1 128,902 + +0.2 128,909 + +1.7 128,911 - -1.0 128,950 + -1.0 128,950 + +0.2 129,078 + +0.4 129,186 - -0.8 129,186 - -0.5 129,313 + -1.5 129,314 - -0.3 129,349 + IAI47_19495 0.21 +0.5 129,349 + IAI47_19495 0.21 -1.3 129,350 - IAI47_19495 0.21 -1.0 129,350 - IAI47_19495 0.21 +1.7 129,354 + IAI47_19495 0.23 -0.9 129,354 + IAI47_19495 0.23 +0.1 129,355 - IAI47_19495 0.23 -0.5 129,364 - IAI47_19495 0.26 -0.4 129,443 - IAI47_19495 0.54 -1.4 129,448 + IAI47_19495 0.56 -0.2 129,448 + IAI47_19495 0.56 +0.0 129,448 + IAI47_19495 0.56 -1.0 129,449 - IAI47_19495 0.56 +0.9 129,449 - IAI47_19495 0.56 +0.5 129,449 - IAI47_19495 0.56 +0.4 129,453 + IAI47_19495 0.58 +0.0 129,453 + IAI47_19495 0.58 +0.8 129,453 + IAI47_19495 0.58 +0.2 129,453 + IAI47_19495 0.58 -0.6 129,454 - IAI47_19495 0.58 -0.3 129,454 - IAI47_19495 0.58 +0.3 129,493 + IAI47_19495 0.72 -1.3 129,493 + IAI47_19495 0.72 -2.0 129,493 + IAI47_19495 0.72 -1.3 129,494 - IAI47_19495 0.72 -0.3 129,494 - IAI47_19495 0.72 +0.5 129,494 - IAI47_19495 0.72 +0.0 129,505 + IAI47_19495 0.76 -0.1 129,505 + IAI47_19495 0.76 +0.7 129,506 - IAI47_19495 0.77 +0.9 129,506 - IAI47_19495 0.77 -1.1 129,527 + IAI47_19495 0.84 -1.0 129,528 - IAI47_19495 0.84 +1.7 129,561 - +1.5 129,563 + -1.0 129,563 + +0.6 129,563 + -1.3 129,564 - +0.7 129,564 - -1.3 129,579 - -1.3 129,624 + +1.0 129,624 + -1.8 129,625 - +1.0 129,625 - +1.0 129,625 - +0.4 129,649 - +2.4 129,669 + -0.5 129,669 + -1.1 129,669 + -1.1 129,670 - +1.4 129,670 - +0.8 129,672 + +2.1 129,673 - +1.3 129,673 - -0.9 129,673 - +1.0 129,673 - +2.8 129,676 + +0.2 129,676 + +0.0 129,676 + +0.3 129,676 + -0.8 129,676 + -0.2 129,677 - +2.1 129,679 + -1.2 129,679 + -1.4 129,680 - +1.8 129,680 - -0.3 129,680 - +0.8 129,680 - +1.7 129,680 - +1.2 129,693 + -0.8 129,693 + +0.1 129,694 - +3.1 129,694 - +0.6 129,694 - -1.2 129,699 - +2.4 129,718 - -0.4 129,719 + +0.5 129,720 - +0.5 129,748 - -0.0 129,748 - -0.5 129,754 - +1.8 129,767 + -0.3 129,768 - +0.4 129,768 - +0.2 129,788 - IAI47_19500 0.12 +0.1 129,788 - IAI47_19500 0.12 -0.3 129,788 - IAI47_19500 0.12 +2.1 129,788 - IAI47_19500 0.12 +0.2 129,822 + IAI47_19500 0.21 -0.2 129,843 + IAI47_19500 0.27 +0.2 129,843 + IAI47_19500 0.27 -0.6 129,843 + IAI47_19500 0.27 -0.1 129,843 + IAI47_19500 0.27 -0.6 129,843 + IAI47_19500 0.27 -0.5 129,844 - IAI47_19500 0.27 -0.3 129,844 - IAI47_19500 0.27 +0.6 129,846 + IAI47_19500 0.27 +0.8 129,847 - IAI47_19500 0.28 -0.4 129,872 + IAI47_19500 0.34 -1.1 129,872 + IAI47_19500 0.34 -0.6 129,872 + IAI47_19500 0.34 -1.4 129,873 - IAI47_19500 0.34 -0.7 129,875 + IAI47_19500 0.35 -1.9 129,875 + IAI47_19500 0.35 -0.5 129,875 + IAI47_19500 0.35 -0.1 129,879 + IAI47_19500 0.36 +0.1 129,880 - IAI47_19500 0.36 -0.4 129,891 + IAI47_19500 0.39 +0.5 129,891 + IAI47_19500 0.39 -1.2 129,892 - IAI47_19500 0.39 +1.7 129,989 + IAI47_19500 0.65 -1.1 130,019 + IAI47_19500 0.73 -1.3 130,032 + IAI47_19500 0.76 +1.6 130,033 - IAI47_19500 0.76 +0.9 130,040 - IAI47_19500 0.78 -0.1 130,049 - IAI47_19500 0.81 +0.4 130,050 + IAI47_19500 0.81 -0.0 130,051 - IAI47_19500 0.81 -0.6 130,116 + -1.2 130,116 + -0.2 130,117 - -1.0 130,140 - +0.6 130,156 + +0.8 130,157 - +1.3 130,158 + -0.2 130,173 + -0.6 130,174 - +1.2 130,174 - +0.7 130,203 + +1.0 130,211 - +0.7 130,250 - +1.6 130,260 - +0.5 130,260 - +0.6 130,283 + -0.4 130,343 - -0.7 130,343 - +0.8 130,343 - +0.4 130,346 + -1.1 130,346 + +1.0 130,346 + +3.5 130,346 + -0.5 130,346 + +0.2 130,347 - +1.1 130,347 - -0.1 130,386 + -0.0 130,386 + +0.4 130,485 + -0.1 130,494 - -0.0 130,510 + -1.6 130,510 + -0.8 130,510 + +1.6 130,511 - -0.7 130,542 + -0.3 130,542 + -0.6 130,542 + -1.8 130,542 + -0.2 130,543 - +0.8 130,543 - +1.9 130,543 - -1.1 130,543 - -0.5 130,543 - +0.7 130,543 - +0.9 130,543 - +0.0 130,563 + -1.6 130,563 + -0.2 130,564 - +0.5
Or see this region's nucleotide sequence