Strain Fitness in Pantoea sp. MT58 around IAI47_09065

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,913,927	-		IAI47_09060	0.47	-1.1
1,914,019	+		IAI47_09060	0.61	-0.4
1,914,019	+		IAI47_09060	0.61	-0.9
1,914,019	+		IAI47_09060	0.61	-0.6
1,914,019	+		IAI47_09060	0.61	+0.1
1,914,020	-		IAI47_09060	0.62	-0.3
1,914,020	-		IAI47_09060	0.62	+0.9
1,914,050	+		IAI47_09060	0.66	+0.9
1,914,051	-		IAI47_09060	0.66	-0.0
1,914,080	-		IAI47_09060	0.71	-0.8
1,914,094	+		IAI47_09060	0.73	-0.2
1,914,095	-		IAI47_09060	0.73	-0.8
1,914,095	-		IAI47_09060	0.73	-0.8
1,914,095	-		IAI47_09060	0.73	-0.1
1,914,095	-		IAI47_09060	0.73	+0.1
1,914,095	-		IAI47_09060	0.73	+0.0
1,914,117	+		IAI47_09060	0.77	+0.1
1,914,117	+		IAI47_09060	0.77	+0.2
1,914,138	+		IAI47_09060	0.80	-0.7
1,914,139	-		IAI47_09060	0.80	-0.3
1,914,198	+		IAI47_09060	0.89	-0.6
1,914,198	+		IAI47_09060	0.89	+1.1
1,914,229	-				-0.6
1,914,245	-				+0.1
1,914,279	-				+1.3
1,914,300	+				+0.1
1,914,300	+				+0.1
1,914,301	-				+0.1
1,914,311	-				+0.9
1,914,311	-				+0.1
1,914,340	-				+0.6
1,914,342	+				-0.1
1,914,342	+				+0.9
1,914,342	+				+1.7
1,914,362	+				+1.1
1,914,366	+				-0.1
1,914,367	-				-0.4
1,914,371	+				+0.6
1,914,431	+				+1.4
1,914,440	-				+1.0
1,914,441	-				-0.8
1,914,453	+				+0.5
1,914,471	+				-0.2
1,914,472	-				-1.1
1,914,498	-				-1.0
1,914,501	-				+0.7
1,914,501	-				+0.5
1,914,505	+				+0.9
1,914,538	+				+1.0
1,914,538	+				+0.2
1,914,539	-				-0.6
1,914,545	-				+0.7
1,914,545	-				-0.7
1,914,682	-				+0.9
1,914,692	+				+1.1
1,914,692	+				+0.4
1,914,692	+				-0.2
1,914,693	-				-0.7
1,914,697	-				+0.6
1,914,741	+				+1.0
1,914,802	-				-0.4
1,914,802	-				-1.2
1,914,816	-				-0.9
1,914,819	+				+0.9
1,914,819	+				+0.9
1,914,819	+				-0.9
1,914,819	+				-0.6
1,914,819	+				+0.1
1,914,820	-				+2.5
1,914,820	-				-0.0
1,914,823	+				+0.5
1,914,823	+				+0.9
1,914,824	-				-0.1
1,914,915	+				-1.1
1,914,915	+				+0.8
1,914,915	+				+0.9
1,914,971	+				+2.3
1,914,971	+				-0.0
1,914,971	+				-0.0
1,914,971	+				+0.3
1,914,971	+				+0.0
1,914,971	+				+2.3
1,914,972	-				+1.9
1,914,972	-				+0.2
1,914,972	-				+0.2
1,915,034	+		IAI47_09065	0.12	+0.9
1,915,034	+		IAI47_09065	0.12	+0.9
1,915,035	-		IAI47_09065	0.12	-0.4
1,915,067	+		IAI47_09065	0.14	+2.1
1,915,068	-		IAI47_09065	0.14	-0.1
1,915,127	+		IAI47_09065	0.18	-0.2
1,915,128	-		IAI47_09065	0.18	-0.2
1,915,128	-		IAI47_09065	0.18	+0.5
1,915,128	-		IAI47_09065	0.18	+1.3
1,915,246	-		IAI47_09065	0.25	+1.3
1,915,254	+		IAI47_09065	0.25	+0.6
1,915,281	-		IAI47_09065	0.27	-0.9
1,915,380	+		IAI47_09065	0.33	+0.3
1,915,381	-		IAI47_09065	0.33	-0.3
1,915,381	-		IAI47_09065	0.33	+0.6
1,915,381	-		IAI47_09065	0.33	+0.9
1,915,381	-		IAI47_09065	0.33	+3.5
1,915,381	-		IAI47_09065	0.33	-0.9
1,915,381	-		IAI47_09065	0.33	+0.9
1,915,404	-		IAI47_09065	0.34	-0.2
1,915,422	+		IAI47_09065	0.36	+0.6
1,915,422	+		IAI47_09065	0.36	-0.6
1,915,423	-		IAI47_09065	0.36	+0.8
1,915,423	-		IAI47_09065	0.36	+0.6
1,915,437	-		IAI47_09065	0.37	-0.8
1,915,437	-		IAI47_09065	0.37	+0.4
1,915,473	+		IAI47_09065	0.39	+1.4
1,915,473	+		IAI47_09065	0.39	+1.1
1,915,473	+		IAI47_09065	0.39	+1.5
1,915,473	+		IAI47_09065	0.39	-0.1
1,915,473	+		IAI47_09065	0.39	+1.9
1,915,473	+		IAI47_09065	0.39	+1.1
1,915,474	-		IAI47_09065	0.39	-0.2
1,915,474	-		IAI47_09065	0.39	-0.1
1,915,474	-		IAI47_09065	0.39	+0.1
1,915,474	-		IAI47_09065	0.39	+2.9
1,915,474	-		IAI47_09065	0.39	+0.7
1,915,474	-		IAI47_09065	0.39	+0.1
1,915,491	+		IAI47_09065	0.40	+1.5
1,915,492	-		IAI47_09065	0.40	+0.3
1,915,493	+		IAI47_09065	0.40	-0.8
1,915,494	-		IAI47_09065	0.40	-0.9
1,915,494	-		IAI47_09065	0.40	+1.7
1,915,548	+		IAI47_09065	0.43	+0.4
1,915,616	+		IAI47_09065	0.47	+1.1
1,915,617	-		IAI47_09065	0.48	-1.3
1,915,617	-		IAI47_09065	0.48	+0.4
1,915,617	-		IAI47_09065	0.48	+1.3
1,915,647	-		IAI47_09065	0.49	+0.4
1,915,647	-				+2.9
1,915,687	+		IAI47_09065	0.52	+0.9
1,915,688	-		IAI47_09065	0.52	-0.1
1,915,688	-		IAI47_09065	0.52	-0.1
1,915,733	+		IAI47_09065	0.55	+1.3
1,915,733	+		IAI47_09065	0.55	+0.1
1,915,734	-		IAI47_09065	0.55	+1.4
1,915,741	-		IAI47_09065	0.55	+0.2
1,915,741	-		IAI47_09065	0.55	+1.0
1,915,744	-		IAI47_09065	0.55	+1.4
1,915,751	+		IAI47_09065	0.56	+0.2
1,915,832	+		IAI47_09065	0.61	+0.1
1,915,832	+		IAI47_09065	0.61	+0.6
1,915,833	-		IAI47_09065	0.61	-1.0
1,915,863	+		IAI47_09065	0.63	+0.3
1,915,863	+		IAI47_09065	0.63	+0.1
1,915,866	-		IAI47_09065	0.63	-1.0
1,915,940	+		IAI47_09065	0.67	-0.6
1,915,941	-		IAI47_09065	0.67	-0.7
1,915,941	-		IAI47_09065	0.67	-0.5
1,915,941	-		IAI47_09065	0.67	+1.1
1,916,003	+		IAI47_09065	0.71	-1.1
1,916,003	+		IAI47_09065	0.71	-1.4
1,916,004	-		IAI47_09065	0.71	+0.1
1,916,004	-		IAI47_09065	0.71	-0.3
1,916,004	-		IAI47_09065	0.71	-0.3
1,916,013	+		IAI47_09065	0.72	-0.3
1,916,013	+		IAI47_09065	0.72	+1.5
1,916,013	+		IAI47_09065	0.72	+1.3
1,916,013	+		IAI47_09065	0.72	+0.7
1,916,014	-		IAI47_09065	0.72	+0.4
1,916,014	-		IAI47_09065	0.72	+0.8
1,916,015	+		IAI47_09065	0.72	+1.0
1,916,015	+		IAI47_09065	0.72	+1.6
1,916,015	+		IAI47_09065	0.72	-1.4
1,916,015	+		IAI47_09065	0.72	+0.4
1,916,015	+		IAI47_09065	0.72	+1.3
1,916,016	-		IAI47_09065	0.72	+0.6
1,916,016	-		IAI47_09065	0.72	+0.4
1,916,016	-		IAI47_09065	0.72	+0.9
1,916,145	+		IAI47_09065	0.80	+2.4
1,916,146	-		IAI47_09065	0.80	-1.0
1,916,162	+		IAI47_09065	0.81	+0.6
1,916,162	+		IAI47_09065	0.81	-0.3
1,916,162	+		IAI47_09065	0.81	+0.2
1,916,163	-		IAI47_09065	0.81	+0.6
1,916,178	+		IAI47_09065	0.82	+1.5
1,916,178	+		IAI47_09065	0.82	+0.4
1,916,204	+		IAI47_09065	0.83	-0.9
1,916,204	+		IAI47_09065	0.83	-0.3
1,916,205	-		IAI47_09065	0.83	+1.9
1,916,205	-		IAI47_09065	0.83	+0.2
1,916,209	+		IAI47_09065	0.84	-0.3
1,916,210	-		IAI47_09065	0.84	+1.9
1,916,210	-		IAI47_09065	0.84	+0.1
1,916,210	-		IAI47_09065	0.84	+0.5
1,916,241	+		IAI47_09065	0.86	+1.2
1,916,241	+		IAI47_09065	0.86	+1.7
1,916,241	+		IAI47_09065	0.86	+0.6
1,916,242	-		IAI47_09065	0.86	+2.5
1,916,242	-		IAI47_09065	0.86	+3.9
1,916,316	+				+0.3
1,916,368	-				-0.8
1,916,370	+				-0.4
1,916,377	+				-0.4
1,916,377	+				+1.9
1,916,378	-				-0.1
1,916,378	-				-1.1
1,916,392	+				+1.9
1,916,414	+				+0.0
1,916,451	+				-0.3
1,916,451	+				+0.9
1,916,452	-				+0.3
1,916,452	-				+0.3
1,916,452	-				-0.9
1,916,452	-				-2.2
1,916,454	+				+1.7
1,916,454	+				-0.4
1,916,455	-				+0.1
1,916,455	-				-0.0
1,916,517	+				-0.6
1,916,517	+				+2.2
1,916,517	+				+1.9
1,916,517	+				+0.3
1,916,517	+				+1.3
1,916,517	+				+1.4
1,916,518	-				-0.2
1,916,518	-				-0.5
1,916,518	-				-0.4
1,916,518	-				+2.5
1,916,518	-				+2.5
1,916,547	+				+0.9
1,916,607	+				+0.8
1,916,610	+				+1.9
1,916,611	-				+2.1
1,916,611	-				+1.6
1,916,623	+				+0.3
1,916,623	+				+1.7
1,916,623	+				+0.3
1,916,623	+				-0.4
1,916,624	-				+1.1
1,916,624	-				-0.6
1,916,624	-				-0.1
1,916,624	-				+1.3
1,916,624	-				-0.8
1,916,626	+				-1.6
1,916,626	+				+1.7
1,916,626	+				-0.9
1,916,627	-				-0.8
1,916,627	-				-0.2
1,916,627	-				+0.1
1,916,657	-				+1.0
1,916,873	+		IAI47_09070	0.15	-0.2
1,916,891	-		IAI47_09070	0.16	-0.7
1,916,909	+		IAI47_09070	0.17	+0.4
1,916,952	-		IAI47_09070	0.20	-0.6
1,917,020	+		IAI47_09070	0.24	+1.1
1,917,054	+		IAI47_09070	0.26	+1.1
1,917,054	+		IAI47_09070	0.26	-0.4
1,917,054	+		IAI47_09070	0.26	+0.9
1,917,054	+		IAI47_09070	0.26	+1.3
1,917,055	-		IAI47_09070	0.26	-0.5
1,917,062	+		IAI47_09070	0.26	-0.1
1,917,062	+		IAI47_09070	0.26	+0.3
1,917,062	+		IAI47_09070	0.26	-0.7
1,917,063	-		IAI47_09070	0.27	-1.1
1,917,063	-		IAI47_09070	0.27	+0.1
1,917,172	-		IAI47_09070	0.33	+0.0
1,917,200	-		IAI47_09070	0.35	-1.4
1,917,200	-		IAI47_09070	0.35	-1.0
1,917,200	-		IAI47_09070	0.35	+1.8
1,917,213	+		IAI47_09070	0.36	+1.9
1,917,216	-		IAI47_09070	0.36	-0.7
1,917,284	+		IAI47_09070	0.40	+0.9
1,917,285	-		IAI47_09070	0.40	-0.7
1,917,285	-		IAI47_09070	0.40	-0.7
1,917,314	+		IAI47_09070	0.42	-0.3
1,917,314	+		IAI47_09070	0.42	+0.7
1,917,314	+		IAI47_09070	0.42	-1.2
1,917,330	-		IAI47_09070	0.43	-0.0
1,917,339	+		IAI47_09070	0.43	-0.7
1,917,340	-		IAI47_09070	0.43	+1.7
1,917,417	+		IAI47_09070	0.48	+0.1
1,917,417	+		IAI47_09070	0.48	+1.5
1,917,418	-		IAI47_09070	0.48	+1.4
1,917,447	+		IAI47_09070	0.50	-1.6
1,917,447	+		IAI47_09070	0.50	-1.4
1,917,448	-		IAI47_09070	0.50	+0.5
1,917,448	-		IAI47_09070	0.50	+1.0
1,917,448	-		IAI47_09070	0.50	+0.3
1,917,448	-		IAI47_09070	0.50	-0.3