Strain Fitness in Pantoea sp. MT58 around IAI47_08710

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,842,042	+		IAI47_08705	0.64	+0.0
1,842,042	+		IAI47_08705	0.64	+0.8
1,842,042	+		IAI47_08705	0.64	+0.0
1,842,043	-		IAI47_08705	0.64	+0.8
1,842,043	-		IAI47_08705	0.64	-0.5
1,842,043	-		IAI47_08705	0.64	-1.9
1,842,045	+		IAI47_08705	0.64	-0.8
1,842,045	+		IAI47_08705	0.64	-1.4
1,842,046	-		IAI47_08705	0.64	-1.3
1,842,046	-		IAI47_08705	0.64	-1.5
1,842,046	-		IAI47_08705	0.64	-0.9
1,842,046	-		IAI47_08705	0.64	-0.8
1,842,047	+		IAI47_08705	0.64	-0.2
1,842,048	-		IAI47_08705	0.64	-2.0
1,842,048	-		IAI47_08705	0.64	-0.2
1,842,123	+		IAI47_08705	0.68	-0.3
1,842,123	+		IAI47_08705	0.68	-0.3
1,842,124	-		IAI47_08705	0.68	-1.1
1,842,124	-		IAI47_08705	0.68	-1.6
1,842,161	+		IAI47_08705	0.70	+0.2
1,842,201	+		IAI47_08705	0.72	-0.5
1,842,201	+		IAI47_08705	0.72	-1.2
1,842,201	+		IAI47_08705	0.72	+1.8
1,842,201	+		IAI47_08705	0.72	+1.2
1,842,201	+		IAI47_08705	0.72	+0.5
1,842,201	+		IAI47_08705	0.72	-1.2
1,842,201	+		IAI47_08705	0.72	-2.4
1,842,201	+		IAI47_08705	0.72	+1.8
1,842,202	-		IAI47_08705	0.72	-0.3
1,842,202	-		IAI47_08705	0.72	+0.8
1,842,202	-		IAI47_08705	0.72	-1.8
1,842,235	+		IAI47_08705	0.73	-0.3
1,842,249	+		IAI47_08705	0.74	-2.1
1,842,249	+		IAI47_08705	0.74	-0.6
1,842,250	-		IAI47_08705	0.74	-0.5
1,842,250	-		IAI47_08705	0.74	-1.8
1,842,250	-		IAI47_08705	0.74	-0.3
1,842,251	+		IAI47_08705	0.74	-1.0
1,842,252	-		IAI47_08705	0.74	-1.4
1,842,252	-		IAI47_08705	0.74	-1.3
1,842,267	+		IAI47_08705	0.75	-1.6
1,842,268	-		IAI47_08705	0.75	-1.5
1,842,287	+		IAI47_08705	0.76	-0.6
1,842,335	-		IAI47_08705	0.78	-1.8
1,842,335	-		IAI47_08705	0.78	+0.0
1,842,405	+		IAI47_08705	0.82	-1.5
1,842,405	+		IAI47_08705	0.82	-2.3
1,842,405	+		IAI47_08705	0.82	-1.3
1,842,406	-		IAI47_08705	0.82	-0.8
1,842,406	-		IAI47_08705	0.82	-1.6
1,842,406	-		IAI47_08705	0.82	-0.2
1,842,425	+		IAI47_08705	0.83	-1.0
1,842,426	-		IAI47_08705	0.83	-1.8
1,842,492	+		IAI47_08705	0.86	-1.1
1,842,492	+		IAI47_08705	0.86	-1.8
1,842,493	-		IAI47_08705	0.86	-1.3
1,842,493	-		IAI47_08705	0.86	-2.1
1,842,493	-		IAI47_08705	0.86	-0.5
1,842,517	-		IAI47_08705	0.87	+0.2
1,842,542	+		IAI47_08705	0.88	-0.5
1,842,554	+		IAI47_08705	0.89	+0.0
1,842,555	-		IAI47_08705	0.89	+0.5
1,842,555	-		IAI47_08705	0.89	-0.3
1,842,555	-		IAI47_08705	0.89	-2.2
1,842,555	-		IAI47_08705	0.89	+0.2
1,842,679	-				-1.1
1,842,680	+				-0.5
1,842,681	-				+0.5
1,842,681	-				-0.9
1,842,697	-				+0.2
1,842,774	+				+0.2
1,842,829	+				-0.8
1,842,842	+				+0.9
1,842,842	+				-0.2
1,842,908	-				+0.6
1,842,908	-				+0.2
1,842,931	+				+0.8
1,842,975	-				+0.7
1,842,975	-				+0.1
1,842,986	+				+1.5
1,842,987	-				+0.3
1,842,987	-				+2.8
1,842,987	-				+0.6
1,842,987	-				-1.9
1,842,988	+				+1.2
1,842,988	+				+1.4
1,842,989	-				-1.1
1,842,989	-				+1.2
1,842,989	-				+0.8
1,842,989	-				-1.0
1,842,989	-				+0.9
1,843,001	+				+1.8
1,843,001	+				-0.3
1,843,001	+				+1.1
1,843,002	-				+1.4
1,843,002	-				-0.8
1,843,014	+				+1.9
1,843,030	+				-0.6
1,843,030	+				+0.2
1,843,030	+				+1.8
1,843,031	-				-0.5
1,843,071	+				+1.1
1,843,072	-				+1.6
1,843,072	-				-1.8
1,843,261	+		IAI47_08710	0.27	+2.1
1,843,261	+		IAI47_08710	0.27	+0.8
1,843,261	+		IAI47_08710	0.27	+1.1
1,843,261	+		IAI47_08710	0.27	+2.0
1,843,261	+		IAI47_08710	0.27	+0.2
1,843,261	+		IAI47_08710	0.27	+0.8
1,843,261	+		IAI47_08710	0.27	+1.0
1,843,261	+		IAI47_08710	0.27	+1.4
1,843,262	-		IAI47_08710	0.27	+0.2
1,843,262	-		IAI47_08710	0.27	+0.7
1,843,264	+		IAI47_08710	0.27	+2.2
1,843,264	+		IAI47_08710	0.27	+1.9
1,843,264	+		IAI47_08710	0.27	+2.4
1,843,265	-		IAI47_08710	0.28	+0.4
1,843,265	-		IAI47_08710	0.28	+1.0
1,843,265	-		IAI47_08710	0.28	-0.2
1,843,265	-		IAI47_08710	0.28	-1.6
1,843,265	-		IAI47_08710	0.28	+0.4
1,843,265	-		IAI47_08710	0.28	+4.8
1,843,265	-		IAI47_08710	0.28	-1.4
1,843,265	-		IAI47_08710	0.28	-2.1
1,843,265	-		IAI47_08710	0.28	+0.2
1,843,265	-		IAI47_08710	0.28	+0.0
1,843,265	-		IAI47_08710	0.28	-0.2
1,843,316	+		IAI47_08710	0.33	+0.2
1,843,317	-		IAI47_08710	0.33	-1.4
1,843,317	-		IAI47_08710	0.33	+0.0
1,843,317	-		IAI47_08710	0.33	+1.0
1,843,317	-		IAI47_08710	0.33	-0.8
1,843,360	+		IAI47_08710	0.38	+1.2
1,843,361	-		IAI47_08710	0.38	-0.5
1,843,552	+		IAI47_08710	0.60	+0.2
1,843,552	+		IAI47_08710	0.60	+2.4
1,843,553	-		IAI47_08710	0.60	+0.8
1,843,604	+		IAI47_08710	0.66	+0.5
1,843,604	+		IAI47_08710	0.66	+1.1
1,843,642	+		IAI47_08710	0.70	+0.6
1,843,643	-		IAI47_08710	0.70	-2.0
1,843,643	-		IAI47_08710	0.70	-0.2
1,843,660	+		IAI47_08710	0.72	+1.0
1,843,660	+		IAI47_08710	0.72	+0.2
1,843,660	+		IAI47_08710	0.72	+0.4
1,843,661	-		IAI47_08710	0.72	+0.1
1,843,661	-		IAI47_08710	0.72	-1.0
1,843,661	-		IAI47_08710	0.72	+1.6
1,843,661	-		IAI47_08710	0.72	+0.2
1,843,766	+		IAI47_08710	0.84	-1.3
1,843,766	+		IAI47_08710	0.84	+0.2
1,843,767	-		IAI47_08710	0.84	+0.0
1,843,767	-		IAI47_08710	0.84	-1.8
1,843,767	-		IAI47_08710	0.84	-0.3
1,843,840	+				+1.4
1,843,840	+				+0.9
1,843,840	+				+1.2
1,843,841	-				-0.8
1,843,858	-				+2.2
1,843,861	+				+2.8
1,843,861	+				+0.7
1,843,861	+				+2.5
1,843,862	-				+0.7
1,843,862	-				-1.7
1,843,867	+				+3.9
1,843,867	+				+0.0
1,843,868	-				-1.1
1,843,868	-				-1.0
1,843,892	+				+2.5
1,843,893	-				+0.2
1,843,902	-				-0.8
1,843,907	+				+1.5
1,843,908	-				-0.6
1,843,908	-				-0.2
1,843,908	-				-0.1
1,843,920	+				+2.2
1,843,920	+				+0.1
1,843,920	+				+0.9
1,843,921	-				+0.7
1,843,921	-				-0.1
1,843,921	-				+0.9
1,843,921	-				+1.2
1,843,951	+				+1.2
1,843,951	+				+0.6
1,843,984	+				+0.7
1,843,984	+				+0.1
1,843,985	-				+2.0
1,843,985	-				+2.6
1,843,985	-				+1.8
1,843,985	-				-1.3
1,843,985	-				+0.2
1,843,985	-				+0.7
1,843,989	+				+0.8
1,843,989	+				+0.2
1,843,990	-				-1.2
1,843,990	-				-0.6
1,843,990	-				+0.3
1,843,990	-				+1.4
1,843,990	-				+0.5
1,843,998	+				-0.2
1,843,999	-				-0.5
1,843,999	-				+0.4
1,844,003	+				-1.2
1,844,003	+				+1.4
1,844,004	-				+1.0
1,844,004	-				+0.6
1,844,004	-				+0.8
1,844,004	-				+0.9
1,844,004	-				-1.0
1,844,038	+				+0.2
1,844,079	-				+0.6
1,844,079	-				+0.7
1,844,079	-				+0.9
1,844,132	+				+0.4
1,844,132	+				-0.6
1,844,133	-				-1.7
1,844,231	+				+0.2
1,844,231	+				-1.0
1,844,232	-				+0.5
1,844,232	-				-0.6
1,844,232	-				+1.8
1,844,363	+				-0.6
1,844,364	-				+1.1
1,844,393	+		IAI47_08715	0.10	-0.6
1,844,394	-		IAI47_08715	0.10	+1.4
1,844,394	-		IAI47_08715	0.10	+0.1
1,844,394	-		IAI47_08715	0.10	+1.4
1,844,450	+		IAI47_08715	0.14	+0.3
1,844,451	-		IAI47_08715	0.14	+1.1
1,844,483	+		IAI47_08715	0.17	-1.9
1,844,483	+		IAI47_08715	0.17	+2.8
1,844,484	-		IAI47_08715	0.17	+0.3
1,844,484	-		IAI47_08715	0.17	+1.2
1,844,534	+		IAI47_08715	0.20	+1.4
1,844,534	+		IAI47_08715	0.20	-0.1
1,844,534	+		IAI47_08715	0.20	+1.0
1,844,534	+		IAI47_08715	0.20	+0.6
1,844,534	+		IAI47_08715	0.20	-0.3
1,844,535	-		IAI47_08715	0.20	+2.1
1,844,535	-		IAI47_08715	0.20	+0.8
1,844,535	-		IAI47_08715	0.20	-0.1
1,844,535	-		IAI47_08715	0.20	-0.3
1,844,535	-		IAI47_08715	0.20	+2.2
1,844,537	+		IAI47_08715	0.20	-0.7
1,844,537	+		IAI47_08715	0.20	-0.3
1,844,700	+		IAI47_08715	0.32	-0.5
1,844,701	-		IAI47_08715	0.32	-0.0
1,844,701	-		IAI47_08715	0.32	-1.5
1,844,826	-		IAI47_08715	0.42	-1.1
1,844,865	+		IAI47_08715	0.44	-0.6
1,844,865	+		IAI47_08715	0.44	+2.0
1,844,865	+		IAI47_08715	0.44	+0.5
1,844,866	-		IAI47_08715	0.44	+0.7
1,844,866	-		IAI47_08715	0.44	+0.5
1,844,866	-		IAI47_08715	0.44	+0.7
1,844,879	+		IAI47_08715	0.45	+0.7