Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04243 and H281DRAFT_04244 are separated by 110 nucleotides H281DRAFT_04244 and H281DRAFT_04245 are separated by 83 nucleotides
H281DRAFT_04243: H281DRAFT_04243 - magnesium and cobalt transporter, at 361,227 to 362,258
_04243
H281DRAFT_04244: H281DRAFT_04244 - apolipoprotein N-acyltransferase, at 362,369 to 364,087
_04244
H281DRAFT_04245: H281DRAFT_04245 - putative metalloprotease, at 364,171 to 364,932
_04245
Position (kb) 362
363
364
365 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 361.377 kb on + strand, within H281DRAFT_04243 at 361.377 kb on + strand, within H281DRAFT_04243 at 361.377 kb on + strand, within H281DRAFT_04243 at 361.549 kb on + strand, within H281DRAFT_04243 at 361.647 kb on + strand, within H281DRAFT_04243 at 361.683 kb on + strand, within H281DRAFT_04243 at 361.683 kb on + strand, within H281DRAFT_04243 at 361.683 kb on + strand, within H281DRAFT_04243 at 361.683 kb on + strand at 361.740 kb on + strand, within H281DRAFT_04243 at 361.901 kb on + strand, within H281DRAFT_04243 at 362.459 kb on + strand at 363.959 kb on - strand at 364.085 kb on + strand at 364.085 kb on + strand at 364.085 kb on + strand at 364.085 kb on + strand at 364.085 kb on + strand at 364.085 kb on + strand at 364.086 kb on - strand at 364.151 kb on - strand at 364.151 kb on - strand at 364.151 kb on - strand at 364.188 kb on + strand at 364.242 kb on + strand at 364.242 kb on + strand at 364.243 kb on - strand at 364.261 kb on + strand, within H281DRAFT_04245 at 364.261 kb on + strand, within H281DRAFT_04245 at 364.261 kb on + strand, within H281DRAFT_04245 at 364.337 kb on + strand, within H281DRAFT_04245 at 364.338 kb on - strand, within H281DRAFT_04245 at 364.338 kb on - strand, within H281DRAFT_04245 at 364.381 kb on - strand, within H281DRAFT_04245 at 364.479 kb on - strand, within H281DRAFT_04245 at 364.503 kb on + strand, within H281DRAFT_04245 at 364.503 kb on + strand, within H281DRAFT_04245 at 364.503 kb on + strand, within H281DRAFT_04245 at 364.541 kb on - strand, within H281DRAFT_04245 at 364.587 kb on - strand, within H281DRAFT_04245 at 364.640 kb on + strand, within H281DRAFT_04245 at 364.640 kb on + strand, within H281DRAFT_04245 at 364.640 kb on + strand, within H281DRAFT_04245 at 364.640 kb on + strand, within H281DRAFT_04245 at 364.641 kb on - strand, within H281DRAFT_04245 at 364.641 kb on - strand, within H281DRAFT_04245 at 364.641 kb on - strand, within H281DRAFT_04245 at 364.641 kb on - strand, within H281DRAFT_04245 at 364.641 kb on - strand, within H281DRAFT_04245 at 364.641 kb on - strand, within H281DRAFT_04245 at 364.641 kb on - strand, within H281DRAFT_04245 at 364.649 kb on + strand, within H281DRAFT_04245 at 364.649 kb on + strand, within H281DRAFT_04245 at 364.649 kb on + strand, within H281DRAFT_04245 at 364.703 kb on - strand, within H281DRAFT_04245 at 364.716 kb on - strand, within H281DRAFT_04245 at 364.722 kb on + strand, within H281DRAFT_04245 at 364.722 kb on + strand, within H281DRAFT_04245 at 364.908 kb on + strand at 364.909 kb on - strand at 364.951 kb on + strand at 364.952 kb on - strand at 364.972 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 361,377 + H281DRAFT_04243 0.15 -1.5 361,377 + H281DRAFT_04243 0.15 -1.7 361,377 + H281DRAFT_04243 0.15 -1.5 361,549 + H281DRAFT_04243 0.31 -0.2 361,647 + H281DRAFT_04243 0.41 -3.4 361,683 + H281DRAFT_04243 0.44 -3.2 361,683 + H281DRAFT_04243 0.44 +0.2 361,683 + H281DRAFT_04243 0.44 +0.0 361,683 + +0.0 361,740 + H281DRAFT_04243 0.50 -0.2 361,901 + H281DRAFT_04243 0.65 +0.3 362,459 + -0.4 363,959 - +0.1 364,085 + +0.0 364,085 + +0.1 364,085 + -0.1 364,085 + -0.5 364,085 + -1.5 364,085 + +0.6 364,086 - -0.4 364,151 - -2.0 364,151 - +0.2 364,151 - +0.2 364,188 + +0.2 364,242 + +0.1 364,242 + +1.1 364,243 - +0.1 364,261 + H281DRAFT_04245 0.12 +0.9 364,261 + H281DRAFT_04245 0.12 -0.2 364,261 + H281DRAFT_04245 0.12 -0.1 364,337 + H281DRAFT_04245 0.22 -0.2 364,338 - H281DRAFT_04245 0.22 +0.5 364,338 - H281DRAFT_04245 0.22 +0.3 364,381 - H281DRAFT_04245 0.28 -0.1 364,479 - H281DRAFT_04245 0.40 -0.9 364,503 + H281DRAFT_04245 0.44 -1.7 364,503 + H281DRAFT_04245 0.44 +0.3 364,503 + H281DRAFT_04245 0.44 -0.3 364,541 - H281DRAFT_04245 0.49 -0.9 364,587 - H281DRAFT_04245 0.55 +0.6 364,640 + H281DRAFT_04245 0.62 +0.2 364,640 + H281DRAFT_04245 0.62 +0.3 364,640 + H281DRAFT_04245 0.62 +0.2 364,640 + H281DRAFT_04245 0.62 -0.6 364,641 - H281DRAFT_04245 0.62 -1.2 364,641 - H281DRAFT_04245 0.62 -0.5 364,641 - H281DRAFT_04245 0.62 +0.6 364,641 - H281DRAFT_04245 0.62 +0.0 364,641 - H281DRAFT_04245 0.62 -0.7 364,641 - H281DRAFT_04245 0.62 +0.1 364,641 - H281DRAFT_04245 0.62 -0.7 364,649 + H281DRAFT_04245 0.63 -0.5 364,649 + H281DRAFT_04245 0.63 -0.7 364,649 + H281DRAFT_04245 0.63 -2.3 364,703 - H281DRAFT_04245 0.70 +0.5 364,716 - H281DRAFT_04245 0.72 +0.1 364,722 + H281DRAFT_04245 0.72 -0.0 364,722 + H281DRAFT_04245 0.72 +0.8 364,908 + -3.2 364,909 - -0.0 364,951 + +0.5 364,952 - +0.0 364,972 + -1.0
Or see this region's nucleotide sequence