Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02493 and H281DRAFT_02494 are separated by 7 nucleotides H281DRAFT_02494 and H281DRAFT_02495 are separated by 181 nucleotides H281DRAFT_02495 and H281DRAFT_02496 are separated by 158 nucleotides H281DRAFT_02496 and H281DRAFT_02497 are separated by 56 nucleotides
H281DRAFT_02493: H281DRAFT_02493 - hypothetical protein, at 70,009 to 71,346
_02493
H281DRAFT_02494: H281DRAFT_02494 - hypothetical protein, at 71,354 to 71,758
_02494
H281DRAFT_02495: H281DRAFT_02495 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 71,940 to 72,971
_02495
H281DRAFT_02496: H281DRAFT_02496 - transcriptional regulator, GntR family, at 73,130 to 73,891
_02496
H281DRAFT_02497: H281DRAFT_02497 - Enoyl-CoA hydratase/carnithine racemase, at 73,948 to 74,679
_02497
Position (kb) 71
72
73 Strain fitness (log2 ratio) -1
0
1
2 at 71.247 kb on + strand at 71.247 kb on + strand at 71.248 kb on - strand at 71.252 kb on - strand at 71.282 kb on + strand at 71.363 kb on - strand at 71.420 kb on + strand, within H281DRAFT_02494 at 71.448 kb on - strand, within H281DRAFT_02494 at 71.589 kb on - strand, within H281DRAFT_02494 at 71.597 kb on - strand, within H281DRAFT_02494 at 71.597 kb on - strand, within H281DRAFT_02494 at 71.621 kb on + strand, within H281DRAFT_02494 at 71.622 kb on - strand, within H281DRAFT_02494 at 71.936 kb on - strand at 72.015 kb on + strand at 72.217 kb on - strand, within H281DRAFT_02495 at 72.263 kb on - strand, within H281DRAFT_02495 at 72.270 kb on + strand, within H281DRAFT_02495 at 72.270 kb on + strand, within H281DRAFT_02495 at 72.270 kb on + strand, within H281DRAFT_02495 at 72.290 kb on + strand, within H281DRAFT_02495 at 72.382 kb on + strand, within H281DRAFT_02495 at 72.382 kb on + strand, within H281DRAFT_02495 at 72.478 kb on - strand, within H281DRAFT_02495 at 72.478 kb on - strand, within H281DRAFT_02495 at 72.534 kb on - strand, within H281DRAFT_02495 at 72.540 kb on + strand, within H281DRAFT_02495 at 72.950 kb on + strand at 73.131 kb on + strand at 73.132 kb on - strand at 73.404 kb on + strand, within H281DRAFT_02496 at 73.578 kb on + strand, within H281DRAFT_02496 at 73.578 kb on + strand, within H281DRAFT_02496 at 73.578 kb on + strand, within H281DRAFT_02496 at 73.579 kb on - strand, within H281DRAFT_02496 at 73.579 kb on - strand, within H281DRAFT_02496
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 71,247 + -0.8 71,247 + +1.3 71,248 - +1.2 71,252 - -0.2 71,282 + +0.0 71,363 - -1.0 71,420 + H281DRAFT_02494 0.16 -0.6 71,448 - H281DRAFT_02494 0.23 -0.2 71,589 - H281DRAFT_02494 0.58 -0.6 71,597 - H281DRAFT_02494 0.60 +0.6 71,597 - H281DRAFT_02494 0.60 -0.3 71,621 + H281DRAFT_02494 0.66 +0.0 71,622 - H281DRAFT_02494 0.66 -0.2 71,936 - -0.9 72,015 + +0.8 72,217 - H281DRAFT_02495 0.27 +0.1 72,263 - H281DRAFT_02495 0.31 -0.0 72,270 + H281DRAFT_02495 0.32 +0.0 72,270 + H281DRAFT_02495 0.32 -0.8 72,270 + H281DRAFT_02495 0.32 -0.8 72,290 + H281DRAFT_02495 0.34 +0.4 72,382 + H281DRAFT_02495 0.43 +0.2 72,382 + H281DRAFT_02495 0.43 +0.8 72,478 - H281DRAFT_02495 0.52 +2.1 72,478 - H281DRAFT_02495 0.52 +0.9 72,534 - H281DRAFT_02495 0.58 +1.4 72,540 + H281DRAFT_02495 0.58 +0.6 72,950 + -0.1 73,131 + +0.6 73,132 - +0.7 73,404 + H281DRAFT_02496 0.36 -1.0 73,578 + H281DRAFT_02496 0.59 +0.1 73,578 + H281DRAFT_02496 0.59 -0.4 73,578 + H281DRAFT_02496 0.59 +0.9 73,579 - H281DRAFT_02496 0.59 +2.4 73,579 - H281DRAFT_02496 0.59 +0.3
Or see this region's nucleotide sequence