Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02434 and H281DRAFT_02435 are separated by 363 nucleotides H281DRAFT_02435 and H281DRAFT_02436 are separated by 18 nucleotides H281DRAFT_02436 and H281DRAFT_02437 are separated by 136 nucleotides
H281DRAFT_02434: H281DRAFT_02434 - Predicted O-linked N-acetylglucosamine transferase, SPINDLY family, at 605,843 to 608,317
_02434
H281DRAFT_02435: H281DRAFT_02435 - protein FliT, at 608,681 to 608,980
_02435
H281DRAFT_02436: H281DRAFT_02436 - flagellar hook-associated protein 2, at 608,999 to 610,525
_02436
H281DRAFT_02437: H281DRAFT_02437 - flagellin, at 610,662 to 611,618
_02437
Position (kb) 608
609
610
611 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 608.028 kb on + strand at 608.029 kb on - strand, within H281DRAFT_02434 at 608.041 kb on - strand, within H281DRAFT_02434 at 608.136 kb on + strand at 608.339 kb on + strand at 608.340 kb on - strand at 608.340 kb on - strand at 608.340 kb on - strand at 608.416 kb on - strand at 608.596 kb on + strand at 608.597 kb on - strand at 608.597 kb on - strand at 608.597 kb on - strand at 608.597 kb on - strand at 608.597 kb on - strand at 609.001 kb on - strand at 609.001 kb on - strand at 609.001 kb on - strand at 609.057 kb on + strand at 609.118 kb on - strand at 609.118 kb on - strand at 609.142 kb on - strand at 609.142 kb on - strand at 609.510 kb on + strand, within H281DRAFT_02436 at 609.550 kb on - strand, within H281DRAFT_02436 at 609.635 kb on - strand, within H281DRAFT_02436 at 609.883 kb on + strand, within H281DRAFT_02436 at 610.031 kb on + strand, within H281DRAFT_02436 at 610.032 kb on - strand, within H281DRAFT_02436 at 610.151 kb on - strand, within H281DRAFT_02436 at 610.151 kb on - strand, within H281DRAFT_02436 at 610.151 kb on - strand, within H281DRAFT_02436 at 610.153 kb on - strand, within H281DRAFT_02436 at 610.153 kb on - strand, within H281DRAFT_02436 at 610.605 kb on - strand at 610.663 kb on + strand at 610.663 kb on + strand at 610.721 kb on + strand at 610.920 kb on + strand, within H281DRAFT_02437 at 610.920 kb on + strand, within H281DRAFT_02437 at 610.921 kb on - strand, within H281DRAFT_02437 at 611.053 kb on + strand, within H281DRAFT_02437 at 611.053 kb on + strand, within H281DRAFT_02437 at 611.237 kb on - strand, within H281DRAFT_02437 at 611.237 kb on - strand, within H281DRAFT_02437 at 611.237 kb on - strand, within H281DRAFT_02437
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 608,028 + -1.4 608,029 - H281DRAFT_02434 0.88 +0.5 608,041 - H281DRAFT_02434 0.89 +0.1 608,136 + -0.3 608,339 + -2.8 608,340 - +0.1 608,340 - +0.5 608,340 - -2.5 608,416 - +0.5 608,596 + +0.1 608,597 - +0.6 608,597 - +0.4 608,597 - -0.1 608,597 - +0.4 608,597 - -2.2 609,001 - +0.2 609,001 - +0.5 609,001 - +0.1 609,057 + +1.1 609,118 - -0.1 609,118 - -1.7 609,142 - -2.7 609,142 - +0.6 609,510 + H281DRAFT_02436 0.33 -1.1 609,550 - H281DRAFT_02436 0.36 -0.4 609,635 - H281DRAFT_02436 0.42 -1.3 609,883 + H281DRAFT_02436 0.58 +0.0 610,031 + H281DRAFT_02436 0.68 -0.0 610,032 - H281DRAFT_02436 0.68 -0.4 610,151 - H281DRAFT_02436 0.75 -0.2 610,151 - H281DRAFT_02436 0.75 -1.2 610,151 - H281DRAFT_02436 0.75 +0.1 610,153 - H281DRAFT_02436 0.76 +0.0 610,153 - H281DRAFT_02436 0.76 +0.3 610,605 - -0.6 610,663 + +1.9 610,663 + -0.0 610,721 + -0.7 610,920 + H281DRAFT_02437 0.27 +0.3 610,920 + H281DRAFT_02437 0.27 +1.2 610,921 - H281DRAFT_02437 0.27 -1.3 611,053 + H281DRAFT_02437 0.41 -0.1 611,053 + H281DRAFT_02437 0.41 +0.0 611,237 - H281DRAFT_02437 0.60 +0.2 611,237 - H281DRAFT_02437 0.60 +0.5 611,237 - H281DRAFT_02437 0.60 +0.2
Or see this region's nucleotide sequence