Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_02313

Experiment: succinate (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_02312 and H281DRAFT_02313 are separated by 790 nucleotidesH281DRAFT_02313 and H281DRAFT_02314 are separated by 113 nucleotides H281DRAFT_02312: H281DRAFT_02312 - type VI secretion system secreted protein VgrG, at 462,524 to 465,202 _02312 H281DRAFT_02313: H281DRAFT_02313 - DNA gyrase subunit B, at 465,993 to 468,464 _02313 H281DRAFT_02314: H281DRAFT_02314 - DNA polymerase III, beta subunit, at 468,578 to 469,681 _02314 Position (kb) 465 466 467 468 469Strain fitness (log2 ratio) -2 -1 0 1at 465.016 kb on + strandat 465.025 kb on + strandat 465.025 kb on + strandat 465.025 kb on + strandat 465.025 kb on + strandat 465.025 kb on + strandat 465.026 kb on - strandat 465.026 kb on - strandat 465.026 kb on - strandat 465.026 kb on - strandat 465.056 kb on - strandat 465.056 kb on - strandat 465.056 kb on - strandat 465.064 kb on - strandat 465.107 kb on + strandat 465.115 kb on + strandat 465.115 kb on + strandat 465.116 kb on - strandat 465.216 kb on - strandat 465.250 kb on + strandat 465.380 kb on + strandat 465.380 kb on + strandat 465.380 kb on + strandat 465.380 kb on + strandat 465.381 kb on - strandat 465.381 kb on - strandat 465.390 kb on + strandat 465.390 kb on + strandat 465.390 kb on + strandat 465.391 kb on - strandat 465.408 kb on - strandat 465.419 kb on + strandat 465.419 kb on + strandat 465.419 kb on + strandat 465.419 kb on + strandat 465.419 kb on + strandat 465.420 kb on - strandat 465.423 kb on + strandat 465.433 kb on - strandat 465.441 kb on + strandat 465.442 kb on - strandat 465.455 kb on - strandat 465.536 kb on + strandat 465.536 kb on + strandat 465.645 kb on + strandat 465.646 kb on - strandat 465.761 kb on + strandat 465.762 kb on - strandat 465.762 kb on - strandat 465.798 kb on + strandat 465.798 kb on + strandat 465.799 kb on - strandat 465.799 kb on - strandat 465.855 kb on + strandat 465.856 kb on - strandat 465.916 kb on + strandat 465.916 kb on + strandat 465.916 kb on + strandat 465.917 kb on - strandat 465.917 kb on - strandat 465.935 kb on + strandat 465.949 kb on + strandat 465.971 kb on + strandat 465.979 kb on + strandat 465.979 kb on + strandat 465.980 kb on - strandat 465.980 kb on - strandat 465.983 kb on + strandat 465.983 kb on + strandat 465.984 kb on - strandat 465.984 kb on - strandat 468.487 kb on - strandat 468.580 kb on - strandat 468.580 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction succinate (C)
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465,016 + +0.0
465,025 + -0.5
465,025 + +0.2
465,025 + +0.1
465,025 + -0.1
465,025 + +0.9
465,026 - -0.1
465,026 - -0.1
465,026 - -0.2
465,026 - -0.1
465,056 - +1.5
465,056 - +0.8
465,056 - -0.2
465,064 - -0.4
465,107 + +0.1
465,115 + -2.1
465,115 + +1.0
465,116 - -1.2
465,216 - +0.3
465,250 + -0.3
465,380 + +0.8
465,380 + -0.4
465,380 + +0.3
465,380 + +0.4
465,381 - +0.4
465,381 - +0.2
465,390 + +0.2
465,390 + -1.0
465,390 + -1.2
465,391 - +0.5
465,408 - -0.2
465,419 + +0.5
465,419 + +0.5
465,419 + +0.0
465,419 + +0.4
465,419 + +0.0
465,420 - +0.3
465,423 + +0.4
465,433 - -0.1
465,441 + -0.2
465,442 - +0.1
465,455 - +1.4
465,536 + +0.2
465,536 + -0.4
465,645 + +0.5
465,646 - +0.9
465,761 + -0.3
465,762 - +0.7
465,762 - -0.0
465,798 + -0.7
465,798 + -2.1
465,799 - -0.3
465,799 - +0.2
465,855 + -0.7
465,856 - +0.1
465,916 + +0.6
465,916 + +0.0
465,916 + +0.5
465,917 - -1.4
465,917 - -1.8
465,935 + +0.7
465,949 + +0.4
465,971 + -0.0
465,979 + +0.3
465,979 + +1.5
465,980 - -0.1
465,980 - -0.1
465,983 + -0.7
465,983 + +0.0
465,984 - -0.2
465,984 - +0.7
468,487 - +0.5
468,580 - +0.1
468,580 - +0.3

Or see this region's nucleotide sequence