Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01823 and H281DRAFT_01824 are separated by 185 nucleotides H281DRAFT_01824 and H281DRAFT_01825 are separated by 87 nucleotides
H281DRAFT_01823: H281DRAFT_01823 - transcriptional regulator, LysR family, at 727,998 to 728,894
_01823
H281DRAFT_01824: H281DRAFT_01824 - methyl-accepting chemotaxis sensory transducer with Cache sensor, at 729,080 to 730,639
_01824
H281DRAFT_01825: H281DRAFT_01825 - Outer membrane protein (porin), at 730,727 to 731,869
_01825
Position (kb) 729
730
731 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 728.167 kb on + strand, within H281DRAFT_01823 at 728.167 kb on + strand, within H281DRAFT_01823 at 728.196 kb on + strand, within H281DRAFT_01823 at 728.197 kb on - strand, within H281DRAFT_01823 at 728.477 kb on + strand, within H281DRAFT_01823 at 728.478 kb on - strand, within H281DRAFT_01823 at 728.834 kb on + strand at 728.893 kb on - strand at 729.019 kb on + strand at 729.020 kb on - strand at 729.020 kb on - strand at 729.020 kb on - strand at 729.044 kb on + strand at 729.044 kb on + strand at 729.045 kb on - strand at 729.108 kb on + strand at 729.109 kb on - strand at 729.109 kb on - strand at 729.156 kb on + strand at 729.178 kb on + strand at 729.179 kb on - strand at 729.347 kb on + strand, within H281DRAFT_01824 at 729.348 kb on - strand, within H281DRAFT_01824 at 729.455 kb on + strand, within H281DRAFT_01824 at 729.500 kb on + strand, within H281DRAFT_01824 at 729.500 kb on + strand, within H281DRAFT_01824 at 729.501 kb on - strand, within H281DRAFT_01824 at 729.501 kb on - strand, within H281DRAFT_01824 at 729.510 kb on - strand, within H281DRAFT_01824 at 729.605 kb on + strand, within H281DRAFT_01824 at 729.605 kb on + strand, within H281DRAFT_01824 at 729.605 kb on + strand, within H281DRAFT_01824 at 729.606 kb on - strand, within H281DRAFT_01824 at 729.633 kb on - strand, within H281DRAFT_01824 at 729.633 kb on - strand, within H281DRAFT_01824 at 729.678 kb on + strand, within H281DRAFT_01824 at 729.679 kb on - strand, within H281DRAFT_01824 at 729.797 kb on - strand, within H281DRAFT_01824 at 730.201 kb on + strand, within H281DRAFT_01824 at 730.202 kb on - strand, within H281DRAFT_01824 at 730.394 kb on - strand, within H281DRAFT_01824 at 730.411 kb on - strand at 730.411 kb on - strand, within H281DRAFT_01824 at 730.411 kb on - strand, within H281DRAFT_01824 at 730.729 kb on - strand at 730.729 kb on - strand at 731.039 kb on - strand, within H281DRAFT_01825 at 731.377 kb on - strand, within H281DRAFT_01825 at 731.377 kb on - strand, within H281DRAFT_01825 at 731.464 kb on - strand, within H281DRAFT_01825 at 731.630 kb on - strand, within H281DRAFT_01825
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 728,167 + H281DRAFT_01823 0.19 +1.1 728,167 + H281DRAFT_01823 0.19 +0.4 728,196 + H281DRAFT_01823 0.22 -0.9 728,197 - H281DRAFT_01823 0.22 +1.3 728,477 + H281DRAFT_01823 0.53 -0.1 728,478 - H281DRAFT_01823 0.54 +0.2 728,834 + +0.4 728,893 - -0.9 729,019 + -1.4 729,020 - +0.5 729,020 - -0.5 729,020 - +1.2 729,044 + +0.1 729,044 + +0.3 729,045 - +0.8 729,108 + -1.0 729,109 - +0.9 729,109 - -0.1 729,156 + +0.7 729,178 + -0.7 729,179 - -0.7 729,347 + H281DRAFT_01824 0.17 -2.5 729,348 - H281DRAFT_01824 0.17 +0.3 729,455 + H281DRAFT_01824 0.24 +0.4 729,500 + H281DRAFT_01824 0.27 +0.2 729,500 + H281DRAFT_01824 0.27 -1.5 729,501 - H281DRAFT_01824 0.27 +0.3 729,501 - H281DRAFT_01824 0.27 -2.8 729,510 - H281DRAFT_01824 0.28 -0.7 729,605 + H281DRAFT_01824 0.34 +0.9 729,605 + H281DRAFT_01824 0.34 +1.0 729,605 + H281DRAFT_01824 0.34 +1.1 729,606 - H281DRAFT_01824 0.34 -0.0 729,633 - H281DRAFT_01824 0.35 +0.2 729,633 - H281DRAFT_01824 0.35 +0.5 729,678 + H281DRAFT_01824 0.38 -2.4 729,679 - H281DRAFT_01824 0.38 +0.4 729,797 - H281DRAFT_01824 0.46 +1.2 730,201 + H281DRAFT_01824 0.72 -0.2 730,202 - H281DRAFT_01824 0.72 -0.4 730,394 - H281DRAFT_01824 0.84 +0.1 730,411 - +0.1 730,411 - H281DRAFT_01824 0.85 -0.5 730,411 - H281DRAFT_01824 0.85 +2.4 730,729 - -1.4 730,729 - -1.9 731,039 - H281DRAFT_01825 0.27 -0.7 731,377 - H281DRAFT_01825 0.57 +0.1 731,377 - H281DRAFT_01825 0.57 -0.0 731,464 - H281DRAFT_01825 0.64 -2.7 731,630 - H281DRAFT_01825 0.79 -3.0
Or see this region's nucleotide sequence