Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00624 and H281DRAFT_00625 are separated by 111 nucleotides H281DRAFT_00625 and H281DRAFT_00626 overlap by 7 nucleotides H281DRAFT_00626 and H281DRAFT_00627 are separated by 581 nucleotides
H281DRAFT_00624: H281DRAFT_00624 - RNase HII, at 700,402 to 701,247
_00624
H281DRAFT_00625: H281DRAFT_00625 - RNA methyltransferase, TrmH family, at 701,359 to 702,186
_00625
H281DRAFT_00626: H281DRAFT_00626 - hypothetical protein, at 702,180 to 703,022
_00626
H281DRAFT_00627: H281DRAFT_00627 - phosphoenolpyruvate synthase, at 703,604 to 706,009
_00627
Position (kb) 702
703
704 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 701.279 kb on + strand at 701.279 kb on + strand at 701.338 kb on - strand at 701.338 kb on - strand at 701.393 kb on - strand at 701.393 kb on - strand at 701.395 kb on - strand at 701.395 kb on - strand at 701.483 kb on - strand, within H281DRAFT_00625 at 701.867 kb on - strand, within H281DRAFT_00625 at 701.950 kb on + strand, within H281DRAFT_00625 at 701.950 kb on + strand, within H281DRAFT_00625 at 701.951 kb on - strand, within H281DRAFT_00625 at 701.951 kb on - strand, within H281DRAFT_00625 at 702.101 kb on + strand, within H281DRAFT_00625 at 702.102 kb on - strand, within H281DRAFT_00625 at 702.184 kb on + strand at 702.184 kb on + strand at 702.638 kb on - strand, within H281DRAFT_00626 at 703.467 kb on + strand at 703.468 kb on - strand at 703.480 kb on + strand at 703.481 kb on - strand at 703.594 kb on - strand at 703.594 kb on - strand at 703.603 kb on + strand at 703.603 kb on + strand at 703.603 kb on + strand at 703.603 kb on + strand at 703.603 kb on + strand at 703.604 kb on - strand at 703.604 kb on - strand at 703.640 kb on + strand at 703.640 kb on + strand at 703.640 kb on + strand at 703.640 kb on + strand at 703.640 kb on + strand at 703.641 kb on - strand at 703.644 kb on + strand at 703.644 kb on + strand at 703.644 kb on + strand at 703.644 kb on + strand at 703.645 kb on - strand at 703.645 kb on - strand at 703.645 kb on - strand at 703.645 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 701,279 + +1.6 701,279 + +0.1 701,338 - +0.9 701,338 - -0.2 701,393 - -0.8 701,393 - +0.2 701,395 - -0.3 701,395 - +0.5 701,483 - H281DRAFT_00625 0.15 +0.0 701,867 - H281DRAFT_00625 0.61 +0.2 701,950 + H281DRAFT_00625 0.71 -0.5 701,950 + H281DRAFT_00625 0.71 -0.4 701,951 - H281DRAFT_00625 0.71 +0.4 701,951 - H281DRAFT_00625 0.71 +0.8 702,101 + H281DRAFT_00625 0.90 -0.7 702,102 - H281DRAFT_00625 0.90 -0.7 702,184 + -0.7 702,184 + -0.1 702,638 - H281DRAFT_00626 0.54 -0.8 703,467 + +0.1 703,468 - -3.2 703,480 + -3.0 703,481 - -1.0 703,594 - -4.3 703,594 - -1.6 703,603 + -3.4 703,603 + -0.4 703,603 + -4.1 703,603 + -2.2 703,603 + -0.2 703,604 - -2.2 703,604 - -1.2 703,640 + -3.5 703,640 + -4.6 703,640 + -1.6 703,640 + -4.0 703,640 + -2.1 703,641 - -3.2 703,644 + -0.2 703,644 + -4.6 703,644 + -1.6 703,644 + -4.3 703,645 - -4.0 703,645 - -2.6 703,645 - -1.9 703,645 - -4.4
Or see this region's nucleotide sequence