Experiment: Pyruvate-Sulfate (60-15mM) with Selenate 750uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU2306 and DVU2307 are separated by 97 nucleotides DVU2307 and DVU2308 are separated by 11 nucleotides DVU2308 and DVU2309 are separated by 261 nucleotides
DVU2306: DVU2306 - phosphate transporter family protein (TIGR), at 2,399,112 to 2,400,122
DVU2306
DVU2307: DVU2307 - C4-type zinc finger protein, DksA/TraR family (TIGR), at 2,400,220 to 2,400,441
DVU2307
DVU2308: DVU2308 - conserved hypothetical protein TIGR00022 (TIGR), at 2,400,453 to 2,400,944
DVU2308
DVU2309: DVU2309 - methyl-accepting chemotaxis protein, putative (TIGR), at 2,401,206 to 2,403,293
DVU2309
Position (kb)
2400
2401 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2399.456 kb on + strand, within DVU2306 at 2399.461 kb on - strand, within DVU2306 at 2399.481 kb on + strand, within DVU2306 at 2399.484 kb on - strand, within DVU2306 at 2399.800 kb on - strand, within DVU2306 at 2400.254 kb on + strand, within DVU2307 at 2400.259 kb on + strand, within DVU2307 at 2400.307 kb on - strand, within DVU2307 at 2400.307 kb on - strand, within DVU2307 at 2400.353 kb on - strand, within DVU2307 at 2400.377 kb on + strand, within DVU2307 at 2400.385 kb on - strand, within DVU2307 at 2400.459 kb on + strand at 2400.467 kb on - strand at 2400.504 kb on - strand, within DVU2308 at 2400.533 kb on + strand, within DVU2308 at 2400.554 kb on + strand, within DVU2308 at 2400.612 kb on + strand, within DVU2308 at 2400.634 kb on + strand, within DVU2308 at 2400.750 kb on + strand, within DVU2308 at 2400.750 kb on + strand, within DVU2308 at 2401.128 kb on - strand at 2401.137 kb on + strand at 2401.153 kb on - strand at 2401.172 kb on - strand at 2401.172 kb on - strand at 2401.193 kb on - strand at 2401.342 kb on - strand at 2401.381 kb on - strand at 2401.381 kb on - strand at 2401.473 kb on - strand, within DVU2309 at 2401.507 kb on - strand, within DVU2309 at 2401.569 kb on + strand, within DVU2309 at 2401.572 kb on - strand, within DVU2309 at 2401.613 kb on + strand, within DVU2309 at 2401.670 kb on - strand, within DVU2309 at 2401.706 kb on - strand, within DVU2309 at 2401.748 kb on - strand, within DVU2309 at 2401.798 kb on - strand, within DVU2309 at 2401.832 kb on - strand, within DVU2309 at 2401.844 kb on + strand, within DVU2309 at 2401.849 kb on + strand, within DVU2309
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Selenate 750uM remove 2,399,456 + DVU2306 0.34 +1.4 2,399,461 - DVU2306 0.35 -0.8 2,399,481 + DVU2306 0.36 +0.0 2,399,484 - DVU2306 0.37 +0.8 2,399,800 - DVU2306 0.68 -0.5 2,400,254 + DVU2307 0.15 +0.1 2,400,259 + DVU2307 0.18 +0.4 2,400,307 - DVU2307 0.39 -0.5 2,400,307 - DVU2307 0.39 +0.7 2,400,353 - DVU2307 0.60 -1.2 2,400,377 + DVU2307 0.71 -0.7 2,400,385 - DVU2307 0.74 +2.2 2,400,459 + -2.4 2,400,467 - -0.0 2,400,504 - DVU2308 0.10 +0.2 2,400,533 + DVU2308 0.16 -0.1 2,400,554 + DVU2308 0.21 +0.0 2,400,612 + DVU2308 0.32 +0.4 2,400,634 + DVU2308 0.37 -0.1 2,400,750 + DVU2308 0.60 +0.8 2,400,750 + DVU2308 0.60 +0.1 2,401,128 - +0.7 2,401,137 + -0.1 2,401,153 - +0.1 2,401,172 - +1.0 2,401,172 - +0.4 2,401,193 - -0.0 2,401,342 - -0.1 2,401,381 - -0.3 2,401,381 - -0.0 2,401,473 - DVU2309 0.13 +0.0 2,401,507 - DVU2309 0.14 +0.0 2,401,569 + DVU2309 0.17 +0.0 2,401,572 - DVU2309 0.18 +0.6 2,401,613 + DVU2309 0.19 +1.3 2,401,670 - DVU2309 0.22 -0.4 2,401,706 - DVU2309 0.24 +0.3 2,401,748 - DVU2309 0.26 +1.8 2,401,798 - DVU2309 0.28 -0.3 2,401,832 - DVU2309 0.30 -1.2 2,401,844 + DVU2309 0.31 +0.5 2,401,849 + DVU2309 0.31 -0.4
Or see this region's nucleotide sequence