Experiment: Pyruvate-Sulfate (60-15mM) with Selenate 750uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU0738 and DVU0739 are separated by 126 nucleotides DVU0739 and DVU0740 are separated by 276 nucleotides DVU0740 and DVU0741 are separated by 56 nucleotides DVU0741 and DVU0742 are separated by 7 nucleotides
DVU0738: DVU0738 - substrate-binding protein, putative (TIGR), at 825,817 to 826,938
DVU0738
DVU0739: DVU0739 - conserved hypothetical protein TIGR00296 (TIGR), at 827,065 to 827,637
DVU0739
DVU0740: DVU0740 - membrane protein, putative (TIGR), at 827,914 to 829,089
DVU0740
DVU0741: DVU0741 - hypothetical protein (TIGR), at 829,146 to 829,622
DVU0741
DVU0742: DVU0742 - hypothetical protein (TIGR), at 829,630 to 830,466
DVU0742
Position (kb) 827
828
829
830 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 826.919 kb on - strand at 826.921 kb on + strand at 826.924 kb on - strand at 827.045 kb on - strand at 827.050 kb on - strand at 827.116 kb on - strand at 827.207 kb on - strand, within DVU0739 at 827.246 kb on - strand, within DVU0739 at 827.299 kb on - strand, within DVU0739 at 827.299 kb on - strand, within DVU0739 at 827.316 kb on + strand, within DVU0739 at 827.359 kb on + strand, within DVU0739 at 827.412 kb on - strand, within DVU0739 at 827.414 kb on + strand, within DVU0739 at 827.417 kb on - strand, within DVU0739 at 827.417 kb on - strand, within DVU0739 at 827.487 kb on - strand, within DVU0739 at 827.521 kb on + strand, within DVU0739 at 827.521 kb on + strand, within DVU0739 at 827.521 kb on + strand, within DVU0739 at 827.521 kb on + strand, within DVU0739 at 827.529 kb on - strand, within DVU0739 at 827.529 kb on - strand, within DVU0739 at 827.552 kb on + strand, within DVU0739 at 827.565 kb on - strand, within DVU0739 at 827.711 kb on + strand at 827.711 kb on + strand at 827.787 kb on - strand at 827.787 kb on - strand at 827.787 kb on - strand at 827.851 kb on + strand at 827.861 kb on - strand at 827.992 kb on + strand at 828.037 kb on + strand, within DVU0740 at 828.037 kb on - strand, within DVU0740 at 828.052 kb on - strand, within DVU0740 at 828.052 kb on - strand, within DVU0740 at 828.052 kb on - strand, within DVU0740 at 828.071 kb on + strand, within DVU0740 at 828.071 kb on + strand, within DVU0740 at 828.076 kb on + strand, within DVU0740 at 828.079 kb on - strand, within DVU0740 at 828.083 kb on - strand, within DVU0740 at 828.202 kb on + strand, within DVU0740 at 828.332 kb on - strand, within DVU0740 at 828.413 kb on + strand, within DVU0740 at 828.423 kb on + strand, within DVU0740 at 828.423 kb on + strand, within DVU0740 at 828.423 kb on + strand, within DVU0740 at 828.423 kb on + strand, within DVU0740 at 828.500 kb on - strand, within DVU0740 at 828.505 kb on - strand, within DVU0740 at 828.513 kb on + strand, within DVU0740 at 828.515 kb on - strand, within DVU0740 at 828.691 kb on - strand, within DVU0740 at 828.704 kb on - strand, within DVU0740 at 828.796 kb on - strand, within DVU0740 at 828.933 kb on + strand, within DVU0740 at 828.945 kb on + strand, within DVU0740 at 828.969 kb on + strand, within DVU0740 at 829.059 kb on + strand at 829.073 kb on - strand at 829.150 kb on - strand at 829.154 kb on + strand at 829.164 kb on + strand at 829.170 kb on - strand at 829.172 kb on - strand at 829.177 kb on + strand at 829.243 kb on - strand, within DVU0741 at 829.286 kb on + strand, within DVU0741 at 829.289 kb on - strand, within DVU0741 at 829.368 kb on - strand, within DVU0741 at 829.389 kb on - strand, within DVU0741 at 829.422 kb on + strand, within DVU0741 at 829.512 kb on - strand, within DVU0741 at 829.527 kb on + strand, within DVU0741 at 829.636 kb on - strand at 829.710 kb on + strand at 829.737 kb on + strand, within DVU0742 at 829.747 kb on + strand, within DVU0742 at 829.755 kb on - strand, within DVU0742 at 829.755 kb on - strand, within DVU0742 at 829.819 kb on + strand, within DVU0742 at 829.897 kb on - strand, within DVU0742 at 829.907 kb on - strand, within DVU0742 at 829.911 kb on + strand, within DVU0742 at 829.951 kb on + strand, within DVU0742 at 829.992 kb on + strand, within DVU0742 at 830.000 kb on - strand, within DVU0742 at 830.000 kb on - strand, within DVU0742 at 830.001 kb on - strand, within DVU0742 at 830.040 kb on - strand, within DVU0742 at 830.086 kb on + strand, within DVU0742
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Selenate 750uM remove 826,919 - -0.2 826,921 + -0.8 826,924 - -1.4 827,045 - -0.1 827,050 - -0.1 827,116 - -0.1 827,207 - DVU0739 0.25 +0.2 827,246 - DVU0739 0.32 -0.1 827,299 - DVU0739 0.41 -0.9 827,299 - DVU0739 0.41 -0.0 827,316 + DVU0739 0.44 +1.6 827,359 + DVU0739 0.51 -0.1 827,412 - DVU0739 0.61 -0.9 827,414 + DVU0739 0.61 -0.6 827,417 - DVU0739 0.61 -1.5 827,417 - DVU0739 0.61 +0.1 827,487 - DVU0739 0.74 -0.2 827,521 + DVU0739 0.80 +0.2 827,521 + DVU0739 0.80 -0.2 827,521 + DVU0739 0.80 -0.7 827,521 + DVU0739 0.80 +0.0 827,529 - DVU0739 0.81 +0.1 827,529 - DVU0739 0.81 -0.1 827,552 + DVU0739 0.85 -2.0 827,565 - DVU0739 0.87 -0.4 827,711 + -0.1 827,711 + -0.1 827,787 - -0.6 827,787 - -0.4 827,787 - +2.4 827,851 + -1.3 827,861 - -0.7 827,992 + +1.8 828,037 + DVU0740 0.10 -0.6 828,037 - DVU0740 0.10 +2.5 828,052 - DVU0740 0.12 -0.2 828,052 - DVU0740 0.12 -0.0 828,052 - DVU0740 0.12 +0.4 828,071 + DVU0740 0.13 -0.3 828,071 + DVU0740 0.13 +0.6 828,076 + DVU0740 0.14 -0.0 828,079 - DVU0740 0.14 +0.9 828,083 - DVU0740 0.14 -0.3 828,202 + DVU0740 0.24 +0.3 828,332 - DVU0740 0.36 +0.2 828,413 + DVU0740 0.42 +0.8 828,423 + DVU0740 0.43 -0.8 828,423 + DVU0740 0.43 +0.3 828,423 + DVU0740 0.43 -1.7 828,423 + DVU0740 0.43 -0.8 828,500 - DVU0740 0.50 +0.4 828,505 - DVU0740 0.50 +0.5 828,513 + DVU0740 0.51 +0.4 828,515 - DVU0740 0.51 +0.8 828,691 - DVU0740 0.66 -0.1 828,704 - DVU0740 0.67 +1.4 828,796 - DVU0740 0.75 +0.3 828,933 + DVU0740 0.87 +2.0 828,945 + DVU0740 0.88 +0.3 828,969 + DVU0740 0.90 +3.0 829,059 + +0.2 829,073 - -0.4 829,150 - -0.6 829,154 + +1.1 829,164 + -0.2 829,170 - -0.5 829,172 - +0.7 829,177 + -0.3 829,243 - DVU0741 0.20 -0.4 829,286 + DVU0741 0.29 +0.1 829,289 - DVU0741 0.30 +1.0 829,368 - DVU0741 0.47 +0.4 829,389 - DVU0741 0.51 -2.7 829,422 + DVU0741 0.58 -0.5 829,512 - DVU0741 0.77 -1.6 829,527 + DVU0741 0.80 +1.0 829,636 - +0.7 829,710 + -1.4 829,737 + DVU0742 0.13 -0.1 829,747 + DVU0742 0.14 -0.4 829,755 - DVU0742 0.15 -0.3 829,755 - DVU0742 0.15 -0.4 829,819 + DVU0742 0.23 +0.1 829,897 - DVU0742 0.32 -0.0 829,907 - DVU0742 0.33 -0.7 829,911 + DVU0742 0.34 +0.1 829,951 + DVU0742 0.38 +0.9 829,992 + DVU0742 0.43 -0.3 830,000 - DVU0742 0.44 -0.7 830,000 - DVU0742 0.44 -0.3 830,001 - DVU0742 0.44 +0.2 830,040 - DVU0742 0.49 +0.2 830,086 + DVU0742 0.54 -0.1
Or see this region's nucleotide sequence