Experiment: Pyruvate-Sulfate (60-15mM) with Selenate 750uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVUA0096 and DORF1985 are separated by 52 nucleotides DORF1985 and DVUA0097 are separated by 70 nucleotides
DVUA0096: DVUA0096 - major facilitator superfamily protein (TIGR), at 129,163 to 130,374
DVUA0096
DORF1985: DORF1985 - no description, at 130,427 to 130,636
DORF1985
DVUA0097: DVUA0097 - radical SAM domain protein (TIGR), at 130,707 to 132,206
DVUA0097
Position (kb) 130
131 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 129.454 kb on + strand, within DVUA0096 at 129.552 kb on + strand, within DVUA0096 at 129.669 kb on + strand, within DVUA0096 at 129.675 kb on - strand, within DVUA0096 at 129.705 kb on + strand, within DVUA0096 at 129.735 kb on + strand, within DVUA0096 at 129.926 kb on - strand, within DVUA0096 at 129.984 kb on - strand, within DVUA0096 at 129.995 kb on - strand, within DVUA0096 at 130.035 kb on + strand, within DVUA0096 at 130.043 kb on - strand, within DVUA0096 at 130.043 kb on - strand, within DVUA0096 at 130.043 kb on - strand, within DVUA0096 at 130.050 kb on - strand, within DVUA0096 at 130.061 kb on + strand, within DVUA0096 at 130.069 kb on - strand, within DVUA0096 at 130.161 kb on + strand, within DVUA0096 at 130.169 kb on - strand, within DVUA0096 at 130.171 kb on + strand, within DVUA0096 at 130.200 kb on + strand, within DVUA0096 at 130.217 kb on + strand, within DVUA0096 at 130.230 kb on - strand, within DVUA0096 at 130.243 kb on - strand, within DVUA0096 at 130.250 kb on + strand, within DVUA0096 at 130.368 kb on + strand at 130.381 kb on - strand at 130.467 kb on - strand, within DORF1985 at 130.542 kb on + strand, within DORF1985 at 130.581 kb on - strand, within DORF1985 at 130.587 kb on + strand, within DORF1985 at 130.587 kb on + strand, within DORF1985 at 130.650 kb on + strand at 130.665 kb on + strand at 130.674 kb on - strand at 130.688 kb on + strand at 130.703 kb on - strand at 130.703 kb on - strand at 131.014 kb on - strand, within DVUA0097 at 131.037 kb on + strand, within DVUA0097 at 131.050 kb on - strand, within DVUA0097 at 131.055 kb on - strand, within DVUA0097 at 131.065 kb on - strand, within DVUA0097 at 131.086 kb on - strand, within DVUA0097 at 131.270 kb on - strand, within DVUA0097 at 131.324 kb on - strand, within DVUA0097 at 131.377 kb on + strand, within DVUA0097 at 131.401 kb on + strand, within DVUA0097 at 131.409 kb on - strand, within DVUA0097 at 131.411 kb on + strand, within DVUA0097 at 131.459 kb on + strand, within DVUA0097 at 131.499 kb on - strand, within DVUA0097 at 131.507 kb on + strand, within DVUA0097 at 131.560 kb on - strand, within DVUA0097 at 131.590 kb on - strand, within DVUA0097
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Selenate 750uM remove 129,454 + DVUA0096 0.24 -1.1 129,552 + DVUA0096 0.32 +0.1 129,669 + DVUA0096 0.42 -0.0 129,675 - DVUA0096 0.42 +0.0 129,705 + DVUA0096 0.45 +0.3 129,735 + DVUA0096 0.47 -0.5 129,926 - DVUA0096 0.63 -3.2 129,984 - DVUA0096 0.68 -0.7 129,995 - DVUA0096 0.69 -0.9 130,035 + DVUA0096 0.72 -0.0 130,043 - DVUA0096 0.73 -0.6 130,043 - DVUA0096 0.73 +0.3 130,043 - DVUA0096 0.73 -0.0 130,050 - DVUA0096 0.73 +1.1 130,061 + DVUA0096 0.74 +0.1 130,069 - DVUA0096 0.75 -0.3 130,161 + DVUA0096 0.82 +0.0 130,169 - DVUA0096 0.83 -0.1 130,171 + DVUA0096 0.83 -0.0 130,200 + DVUA0096 0.86 +0.3 130,217 + DVUA0096 0.87 +1.0 130,230 - DVUA0096 0.88 -0.4 130,243 - DVUA0096 0.89 -0.2 130,250 + DVUA0096 0.90 +0.4 130,368 + -0.6 130,381 - +0.1 130,467 - DORF1985 0.19 -0.1 130,542 + DORF1985 0.55 -0.5 130,581 - DORF1985 0.73 -0.2 130,587 + DORF1985 0.76 -0.2 130,587 + DORF1985 0.76 -0.3 130,650 + -0.1 130,665 + +0.3 130,674 - +0.1 130,688 + -0.5 130,703 - +0.1 130,703 - -0.2 131,014 - DVUA0097 0.20 -0.4 131,037 + DVUA0097 0.22 +0.5 131,050 - DVUA0097 0.23 -0.8 131,055 - DVUA0097 0.23 -0.4 131,065 - DVUA0097 0.24 -0.3 131,086 - DVUA0097 0.25 +0.1 131,270 - DVUA0097 0.38 -0.4 131,324 - DVUA0097 0.41 -0.1 131,377 + DVUA0097 0.45 +0.9 131,401 + DVUA0097 0.46 -0.1 131,409 - DVUA0097 0.47 -0.7 131,411 + DVUA0097 0.47 -0.1 131,459 + DVUA0097 0.50 +0.1 131,499 - DVUA0097 0.53 +0.2 131,507 + DVUA0097 0.53 +0.3 131,560 - DVUA0097 0.57 -0.0 131,590 - DVUA0097 0.59 -0.3
Or see this region's nucleotide sequence