Experiment: Pyruvate-Sulfate (60-15mM) with Selenate 750uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU1148 and DORF9582 are separated by 593 nucleotides DORF9582 and DORF9585 are separated by 81 nucleotides DORF9585 and DVU1151 are separated by 452 nucleotides DVU1151 and DVU1152 are separated by 124 nucleotides
DVU1148: DVU1148 - conserved hypothetical protein (TIGR), at 1,243,218 to 1,244,264
DVU1148
DORF9582: DORF9582 - no description, at 1,244,858 to 1,245,076
DORF9582
DORF9585: DORF9585 - no description, at 1,245,158 to 1,245,361
DORF9585
DVU1151: DVU1151 - hypothetical protein (TIGR), at 1,245,814 to 1,245,966
DVU1151
DVU1152: DVU1152 - hypothetical protein (TIGR), at 1,246,091 to 1,246,705
DVU1152
Position (kb)
1245
1246 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1244.160 kb on + strand at 1244.168 kb on - strand at 1244.313 kb on + strand at 1244.340 kb on + strand at 1244.369 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.410 kb on + strand at 1244.418 kb on - strand at 1244.457 kb on - strand at 1244.546 kb on + strand at 1244.570 kb on - strand at 1244.588 kb on + strand at 1244.588 kb on + strand at 1244.588 kb on + strand at 1244.588 kb on + strand at 1244.589 kb on + strand at 1244.589 kb on + strand at 1244.596 kb on - strand at 1244.596 kb on - strand at 1244.596 kb on - strand at 1244.596 kb on - strand at 1244.596 kb on - strand at 1244.597 kb on - strand at 1244.616 kb on - strand at 1244.616 kb on - strand at 1244.638 kb on - strand at 1244.663 kb on - strand at 1244.733 kb on - strand at 1244.833 kb on - strand at 1244.845 kb on + strand at 1244.896 kb on - strand, within DORF9582 at 1244.953 kb on + strand, within DORF9582 at 1244.999 kb on + strand, within DORF9582 at 1245.031 kb on - strand, within DORF9582 at 1245.031 kb on - strand, within DORF9582 at 1245.136 kb on + strand at 1245.210 kb on - strand, within DORF9585 at 1245.401 kb on - strand at 1245.507 kb on + strand at 1245.550 kb on + strand at 1245.552 kb on + strand at 1245.627 kb on - strand at 1245.757 kb on + strand at 1245.758 kb on + strand at 1245.758 kb on + strand at 1245.765 kb on - strand at 1245.765 kb on - strand at 1245.765 kb on - strand at 1246.030 kb on - strand at 1246.048 kb on - strand at 1246.101 kb on - strand at 1246.128 kb on - strand at 1246.176 kb on + strand, within DVU1152 at 1246.176 kb on + strand, within DVU1152 at 1246.176 kb on + strand, within DVU1152 at 1246.176 kb on + strand, within DVU1152 at 1246.184 kb on - strand, within DVU1152 at 1246.184 kb on - strand, within DVU1152 at 1246.291 kb on + strand, within DVU1152
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Selenate 750uM remove 1,244,160 + -0.5 1,244,168 - -0.2 1,244,313 + -1.7 1,244,340 + +0.9 1,244,369 + -0.0 1,244,410 + -0.5 1,244,410 + +0.3 1,244,410 + -0.4 1,244,410 + +0.7 1,244,410 + +1.3 1,244,410 + +0.7 1,244,418 - -0.2 1,244,457 - +0.6 1,244,546 + +0.0 1,244,570 - -0.0 1,244,588 + -0.0 1,244,588 + -0.5 1,244,588 + -0.2 1,244,588 + +2.0 1,244,589 + -0.1 1,244,589 + -0.1 1,244,596 - +0.1 1,244,596 - +1.1 1,244,596 - +0.1 1,244,596 - -1.3 1,244,596 - -0.2 1,244,597 - +0.2 1,244,616 - -0.2 1,244,616 - -0.1 1,244,638 - -0.2 1,244,663 - -0.8 1,244,733 - -0.2 1,244,833 - +1.4 1,244,845 + -0.3 1,244,896 - DORF9582 0.17 -0.2 1,244,953 + DORF9582 0.43 +0.1 1,244,999 + DORF9582 0.64 -0.3 1,245,031 - DORF9582 0.79 -0.6 1,245,031 - DORF9582 0.79 -1.4 1,245,136 + -0.4 1,245,210 - DORF9585 0.25 +0.3 1,245,401 - -0.9 1,245,507 + +0.1 1,245,550 + -2.0 1,245,552 + -1.1 1,245,627 - -0.0 1,245,757 + -1.2 1,245,758 + +0.1 1,245,758 + +0.4 1,245,765 - -0.3 1,245,765 - -0.3 1,245,765 - +0.0 1,246,030 - -3.7 1,246,048 - -0.9 1,246,101 - +1.5 1,246,128 - +1.8 1,246,176 + DVU1152 0.14 -2.3 1,246,176 + DVU1152 0.14 -0.4 1,246,176 + DVU1152 0.14 +1.9 1,246,176 + DVU1152 0.14 -0.0 1,246,184 - DVU1152 0.15 -0.2 1,246,184 - DVU1152 0.15 -1.4 1,246,291 + DVU1152 0.33 -0.1
Or see this region's nucleotide sequence