Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5544

Experiment: Calcium chloride 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Calcium chloride 0.0125 M
6,358,299	+				+1.1
6,358,319	+				-0.0
6,358,321	+				-0.2
6,358,321	+				+0.1
6,358,321	+				+0.1
6,358,321	+				+0.2
6,358,328	+				+1.4
6,358,328	+				+0.4
6,358,332	+				+0.1
6,358,350	+				-2.9
6,358,350	+				-0.4
6,358,858	+				-3.5
6,358,858	+				-2.5
6,358,858	+				-3.2
6,358,889	+				-2.1
6,358,965	+				-1.7
6,358,965	+				-1.3
6,358,980	+				-2.6
6,359,192	+		Pf6N2E2_5544	0.33	-2.5
6,359,193	-		Pf6N2E2_5544	0.33	-2.8
6,359,350	+		Pf6N2E2_5544	0.53	-1.0
6,359,353	+		Pf6N2E2_5544	0.54	-2.1
6,359,353	+		Pf6N2E2_5544	0.54	-1.3
6,359,353	+		Pf6N2E2_5544	0.54	-3.0
6,359,353	+		Pf6N2E2_5544	0.54	-1.0
6,359,353	+		Pf6N2E2_5544	0.54	-3.4
6,359,354	-		Pf6N2E2_5544	0.54	-0.5
6,359,431	+		Pf6N2E2_5544	0.64	-2.8
6,359,431	+		Pf6N2E2_5544	0.64	-2.5
6,359,431	+		Pf6N2E2_5544	0.64	-2.8
6,359,464	+		Pf6N2E2_5544	0.68	-3.8
6,359,543	-		Pf6N2E2_5544	0.79	-1.8
6,359,543	-		Pf6N2E2_5544	0.79	-1.9
6,359,543	-		Pf6N2E2_5544	0.79	-1.4
6,359,543	-		Pf6N2E2_5544	0.79	-1.9
6,359,575	+		Pf6N2E2_5544	0.83	-0.3
6,359,591	+		Pf6N2E2_5544	0.85	-2.9
6,359,621	+		Pf6N2E2_5544	0.89	-0.6
6,359,621	+		Pf6N2E2_5544	0.89	-2.4
6,359,621	+		Pf6N2E2_5544	0.89	-1.6
6,359,621	+		Pf6N2E2_5544	0.89	-2.1
6,359,622	-		Pf6N2E2_5544	0.89	+0.1
6,359,622	-		Pf6N2E2_5544	0.89	-1.9
6,359,622	-		Pf6N2E2_5544	0.89	-1.2
6,359,704	+				-0.7
6,359,704	+				+0.5
6,359,704	+				+0.8
6,359,704	+				+0.7
6,359,705	-				-2.6
6,359,705	-				+0.9
6,359,777	-				+1.8
6,359,850	+				+0.3
6,359,857	+				-0.3
6,359,858	-				+0.7
6,359,873	-				-0.7
6,359,949	+		Pf6N2E2_5545	0.12	-0.3
6,359,950	-		Pf6N2E2_5545	0.12	+0.6
6,359,950	-		Pf6N2E2_5545	0.12	-0.3
6,359,987	+		Pf6N2E2_5545	0.18	+0.5
6,360,063	-		Pf6N2E2_5545	0.29	-0.1
6,360,074	+		Pf6N2E2_5545	0.31	-0.0
6,360,075	-		Pf6N2E2_5545	0.31	-0.0
6,360,188	-		Pf6N2E2_5545	0.49	-0.1
6,360,362	+		Pf6N2E2_5545	0.75	+0.6
6,360,487	+				-0.9
6,360,487	+				+0.3
6,360,487	+				-1.5
6,360,488	-				+0.3
6,360,488	-				+0.7
6,360,491	+				+1.0
6,360,491	+				+0.4
6,360,491	+				-0.9
6,360,492	-				+0.3
6,360,521	+				+0.1
6,360,521	+				+0.8
6,360,522	-				-1.4
6,360,522	-				-0.1
6,360,631	-		Pf6N2E2_5546	0.16	-0.1
6,360,631	-		Pf6N2E2_5546	0.16	+0.2
6,360,631	-		Pf6N2E2_5546	0.16	-1.3
6,360,649	-		Pf6N2E2_5546	0.18	+1.8