Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4108

Experiment: Calcium chloride 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Calcium chloride 0.0125 M
4,786,693	+		Pf6N2E2_4107	0.51	-1.0
4,786,694	-		Pf6N2E2_4107	0.51	-0.5
4,786,707	+		Pf6N2E2_4107	0.53	+0.0
4,786,708	-		Pf6N2E2_4107	0.53	-0.7
4,786,757	+		Pf6N2E2_4107	0.61	-0.4
4,786,757	+		Pf6N2E2_4107	0.61	+0.5
4,786,758	-		Pf6N2E2_4107	0.61	-0.9
4,786,758	-		Pf6N2E2_4107	0.61	-0.2
4,786,758	-		Pf6N2E2_4107	0.61	-0.0
4,786,758	-		Pf6N2E2_4107	0.61	-0.6
4,786,758	-		Pf6N2E2_4107	0.61	+1.0
4,786,758	-		Pf6N2E2_4107	0.61	-0.9
4,786,758	-		Pf6N2E2_4107	0.61	+0.0
4,786,766	+		Pf6N2E2_4107	0.62	-0.2
4,786,850	-		Pf6N2E2_4107	0.75	-0.6
4,786,850	-		Pf6N2E2_4107	0.75	-0.0
4,786,867	+		Pf6N2E2_4107	0.78	-0.1
4,786,873	+		Pf6N2E2_4107	0.79	-0.3
4,786,873	+		Pf6N2E2_4107	0.79	+0.5
4,786,873	+		Pf6N2E2_4107	0.79	-0.4
4,786,873	+		Pf6N2E2_4107	0.79	-0.5
4,786,874	-		Pf6N2E2_4107	0.79	-0.3
4,786,874	-		Pf6N2E2_4107	0.79	-0.8
4,786,874	-		Pf6N2E2_4107	0.79	+0.2
4,786,874	-		Pf6N2E2_4107	0.79	+2.6
4,786,874	-		Pf6N2E2_4107	0.79	+0.2
4,786,877	+		Pf6N2E2_4107	0.80	-0.5
4,786,877	+		Pf6N2E2_4107	0.80	+0.5
4,786,877	+		Pf6N2E2_4107	0.80	+0.9
4,786,877	+		Pf6N2E2_4107	0.80	+0.1
4,786,877	+		Pf6N2E2_4107	0.80	-0.6
4,786,878	-		Pf6N2E2_4107	0.80	+0.1
4,786,878	-		Pf6N2E2_4107	0.80	-0.6
4,786,878	-		Pf6N2E2_4107	0.80	-0.1
4,786,925	-		Pf6N2E2_4107	0.87	-0.0
4,786,957	+				-0.2
4,787,004	-				-0.8
4,787,030	+				+0.1
4,787,031	-				-0.2
4,787,031	-				-0.2
4,787,211	+				+1.1
4,787,211	+				+0.4
4,787,211	+				-0.0
4,787,212	-				-0.9
4,787,212	-				+1.4
4,787,212	-				-0.7
4,787,317	+				-0.6
4,787,330	+				-1.5
4,787,330	+				-0.5
4,787,331	-				+0.2
4,787,331	-				+0.0
4,787,370	+				-0.5
4,787,370	+				+0.5
4,787,370	+				+0.5
4,787,371	-				-0.3
4,787,376	+				-0.3
4,787,376	+				+0.0
4,787,376	+				-0.3
4,787,377	-				-0.7
4,787,377	-				+0.1
4,787,377	-				-0.2
4,787,418	+				+0.1
4,787,418	+				+0.3
4,787,418	+				+0.7
4,787,418	+				+0.0
4,787,455	+				-0.6
4,787,456	-				-0.2
4,787,473	+				-0.1
4,787,567	+				-0.9
4,787,568	-				-0.2
4,787,575	+				-2.0
4,787,576	-				-0.2
4,787,576	-				-0.7
4,787,576	-				-2.0
4,787,576	-				+0.0
4,787,576	-				+0.6
4,787,578	+				-0.9
4,787,578	+				+0.1
4,787,578	+				-0.5
4,787,578	+				-1.1
4,787,579	-				-0.3
4,787,579	-				-0.0
4,787,579	-				-0.7
4,787,630	+				-1.2
4,787,630	+				-1.1
4,787,630	+				-1.3
4,787,630	+				-2.1
4,787,631	-				-0.2
4,787,631	-				+0.6
4,787,631	-				+0.6
4,787,631	-				-0.1
4,787,631	-				-1.4
4,787,633	+				-1.1
4,787,633	+				-1.4
4,787,633	+				-1.3
4,787,634	-				-0.8
4,787,634	-				+0.6
4,787,634	-				+0.4
4,787,634	-				+0.4
4,787,757	+		Pf6N2E2_4108	0.29	+0.3
4,787,758	-		Pf6N2E2_4108	0.29	+0.0
4,787,758	-		Pf6N2E2_4108	0.29	-0.2
4,787,758	-		Pf6N2E2_4108	0.29	-1.0
4,787,758	-		Pf6N2E2_4108	0.29	-0.2
4,787,758	-		Pf6N2E2_4108	0.29	+0.1
4,787,758	-		Pf6N2E2_4108	0.29	+1.0
4,787,758	-		Pf6N2E2_4108	0.29	-0.0
4,787,783	+		Pf6N2E2_4108	0.36	-0.3
4,787,809	+		Pf6N2E2_4108	0.43	-0.6
4,787,809	+		Pf6N2E2_4108	0.43	+0.4
4,787,809	+		Pf6N2E2_4108	0.43	+0.2
4,787,809	+		Pf6N2E2_4108	0.43	-0.3
4,787,809	+		Pf6N2E2_4108	0.43	-0.1
4,787,809	+		Pf6N2E2_4108	0.43	-0.4
4,787,809	+		Pf6N2E2_4108	0.43	-1.6
4,787,809	+		Pf6N2E2_4108	0.43	-0.5
4,787,810	-		Pf6N2E2_4108	0.44	-0.5
4,787,810	-		Pf6N2E2_4108	0.44	-0.6
4,787,810	-		Pf6N2E2_4108	0.44	-1.2
4,788,012	+				-0.5
4,788,013	-				+0.0
4,788,016	+				-0.3
4,788,016	+				+0.1
4,788,016	+				+0.0
4,788,017	-				+0.3
4,788,017	-				-0.7
4,788,017	-				+0.2
4,788,017	-				+0.9
4,788,060	+				+0.7
4,788,061	-				+0.9
4,788,076	-				+0.9
4,788,179	+				+0.3
4,788,179	+				-0.2
4,788,179	+				+0.4
4,788,180	-				-0.8
4,788,180	-				+0.2
4,788,180	-				-0.3
4,788,180	-				-1.3
4,788,198	+				-0.2
4,788,198	+				+0.4
4,788,350	-				+1.0
4,788,458	+				-1.2
4,788,458	+				+0.2
4,788,458	+				-1.6
4,788,458	+				+1.2
4,788,459	-				-0.7
4,788,459	-				+0.3
4,788,459	-				+0.5
4,788,459	-				-1.0
4,788,459	-				+0.1
4,788,459	-				+0.3
4,788,461	+				+0.5
4,788,461	+				-1.7
4,788,461	+				+1.3
4,788,461	+				+0.1
4,788,461	+				+0.4
4,788,462	-				-1.2
4,788,462	-				+0.4
4,788,466	+				+1.4
4,788,467	-				-2.1
4,788,491	-				-0.1
4,788,536	+		Pf6N2E2_4110	0.33	+1.0
4,788,537	-		Pf6N2E2_4110	0.34	-0.1
4,788,546	-		Pf6N2E2_4110	0.37	+0.8
4,788,546	-		Pf6N2E2_4110	0.37	-0.5
4,788,597	+		Pf6N2E2_4110	0.54	+0.4
4,788,635	+		Pf6N2E2_4110	0.66	-0.9
4,788,636	-		Pf6N2E2_4110	0.67	+0.3
4,788,656	+		Pf6N2E2_4110	0.73	+0.8
4,788,656	+		Pf6N2E2_4110	0.73	-0.4
4,788,656	+		Pf6N2E2_4110	0.73	+1.4
4,788,731	+				-0.4
4,788,731	+				+0.3
4,788,731	+				-0.5
4,788,731	+				+1.1
4,788,731	+				+0.3
4,788,731	+				+0.8
4,788,737	+				+1.2
4,788,738	-				-0.1
4,788,766	-				+0.3
4,788,774	+				+0.1
4,788,775	-				-0.2
4,788,853	+				+0.5
4,788,853	+				+1.2
4,788,853	+				+0.1
4,788,853	+				-0.0
4,788,853	+				-0.2
4,788,854	-				+1.3
4,789,008	+		Pf6N2E2_4111	0.26	+0.3
4,789,008	+		Pf6N2E2_4111	0.26	-0.0
4,789,009	-		Pf6N2E2_4111	0.27	-0.2
4,789,009	-		Pf6N2E2_4111	0.27	-0.6
4,789,009	-		Pf6N2E2_4111	0.27	-0.7