Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_3711

Experiment: Calcium chloride 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Calcium chloride 0.0125 M
4,324,929	+				+2.5
4,324,929	+				-0.1
4,324,929	+				+0.7
4,324,930	-				+0.6
4,324,933	+				+0.3
4,324,933	+				+1.1
4,324,933	+				+0.8
4,324,934	-				+0.8
4,324,954	-				+0.3
4,324,954	-				-0.0
4,325,101	+				+1.7
4,325,115	+				+0.0
4,325,115	+				+0.9
4,325,115	+				+0.7
4,325,115	+				+0.4
4,325,115	+				+0.1
4,325,116	-				-1.1
4,325,116	-				+0.1
4,325,205	+				+0.8
4,325,205	+				-0.0
4,325,206	-				-0.1
4,325,325	+		Pf6N2E2_3710	0.13	-0.1
4,325,325	+		Pf6N2E2_3710	0.13	-1.3
4,325,451	+		Pf6N2E2_3710	0.30	+0.6
4,325,451	+		Pf6N2E2_3710	0.30	-1.2
4,325,452	-		Pf6N2E2_3710	0.30	+1.0
4,325,452	-		Pf6N2E2_3710	0.30	-0.7
4,325,464	+		Pf6N2E2_3710	0.32	+0.9
4,325,464	+		Pf6N2E2_3710	0.32	-0.8
4,325,464	+		Pf6N2E2_3710	0.32	-0.9
4,325,464	+		Pf6N2E2_3710	0.32	-0.6
4,325,464	+		Pf6N2E2_3710	0.32	-1.9
4,325,465	-		Pf6N2E2_3710	0.32	-0.9
4,325,735	+		Pf6N2E2_3710	0.70	-0.1
4,325,735	+		Pf6N2E2_3710	0.70	-1.0
4,325,735	+		Pf6N2E2_3710	0.70	+0.1
4,325,735	+		Pf6N2E2_3710	0.70	-2.1
4,325,736	-		Pf6N2E2_3710	0.70	-0.3
4,325,736	-		Pf6N2E2_3710	0.70	-0.1
4,325,736	-		Pf6N2E2_3710	0.70	+0.9
4,325,736	-		Pf6N2E2_3710	0.70	-0.0
4,325,736	-		Pf6N2E2_3710	0.70	+0.1
4,325,768	+		Pf6N2E2_3710	0.74	-0.3
4,325,769	-		Pf6N2E2_3710	0.74	+0.8
4,325,785	-		Pf6N2E2_3710	0.77	-1.2
4,325,879	-		Pf6N2E2_3710	0.90	-1.0
4,325,928	+				-0.3
4,325,928	+				+0.7
4,325,929	-				-0.5
4,325,929	-				-0.7
4,325,929	-				-1.0
4,325,962	+				-0.3
4,325,962	+				+0.2
4,325,963	-				-1.4
4,325,963	-				-1.2
4,325,974	+				-0.5
4,325,974	+				-0.4
4,325,975	-				-2.5
4,325,975	-				+0.2
4,325,975	-				-0.4
4,325,975	-				+0.3
4,325,977	+				+0.3
4,325,978	-				-1.3
4,326,172	+		Pf6N2E2_3711	0.30	-0.4
4,326,172	+		Pf6N2E2_3711	0.30	-0.4
4,326,173	-		Pf6N2E2_3711	0.30	-1.3
4,326,173	-		Pf6N2E2_3711	0.30	-0.8
4,326,346	+		Pf6N2E2_3711	0.51	+0.5
4,326,346	+		Pf6N2E2_3711	0.51	+0.5
4,326,346	+		Pf6N2E2_3711	0.51	-1.0
4,326,346	+		Pf6N2E2_3711	0.51	-0.4
4,326,346	+		Pf6N2E2_3711	0.51	-0.6
4,326,346	+		Pf6N2E2_3711	0.51	-0.4
4,326,347	-		Pf6N2E2_3711	0.52	-0.6
4,326,347	-		Pf6N2E2_3711	0.52	+0.1
4,326,347	-		Pf6N2E2_3711	0.52	-0.2
4,326,620	+		Pf6N2E2_3711	0.85	-0.8
4,326,620	+		Pf6N2E2_3711	0.85	-0.3
4,326,620	+		Pf6N2E2_3711	0.85	-2.1
4,326,621	-		Pf6N2E2_3711	0.85	-0.9
4,326,621	-		Pf6N2E2_3711	0.85	-0.2
4,326,694	+				-1.8
4,326,694	+				-1.1
4,326,694	+				-0.6
4,326,694	+				-1.5
4,326,694	+				-1.0
4,326,695	-				-0.6
4,326,695	-				-0.2
4,326,697	+				-2.1
4,326,697	+				-0.7
4,326,697	+				-0.5
4,326,697	+				-2.1
4,326,697	+				-2.0
4,326,697	+				+0.3
4,326,698	-				+0.8
4,326,698	-				+0.1
4,326,698	-				-0.5
4,326,780	+		Pf6N2E2_3712	0.23	+0.2
4,326,780	+		Pf6N2E2_3712	0.23	-2.5
4,326,780	+		Pf6N2E2_3712	0.23	-0.1
4,326,780	+		Pf6N2E2_3712	0.23	+0.9
4,326,780	+		Pf6N2E2_3712	0.23	-0.8
4,326,781	-		Pf6N2E2_3712	0.24	-2.1
4,326,781	-		Pf6N2E2_3712	0.24	-1.5
4,326,781	-		Pf6N2E2_3712	0.24	-2.8
4,326,781	-		Pf6N2E2_3712	0.24	-0.5
4,326,781	-		Pf6N2E2_3712	0.24	+0.3
4,326,781	-		Pf6N2E2_3712	0.24	+0.6
4,326,858	+		Pf6N2E2_3712	0.53	-1.9
4,326,882	-		Pf6N2E2_3712	0.62	-0.2
4,326,894	+		Pf6N2E2_3712	0.67	-2.2
4,327,007	-				-0.5
4,327,086	-		Pf6N2E2_3713	0.38	-0.5
4,327,135	+		Pf6N2E2_3713	0.57	-0.4
4,327,135	+		Pf6N2E2_3713	0.57	-0.1
4,327,136	-		Pf6N2E2_3713	0.58	+0.3
4,327,300	+		Pf6N2E2_3714	0.11	+0.1
4,327,528	+		Pf6N2E2_3714	0.53	-1.6
4,327,597	+		Pf6N2E2_3714	0.65	-1.2
4,327,597	+		Pf6N2E2_3714	0.65	+0.7
4,327,597	+		Pf6N2E2_3714	0.65	-0.2
4,327,598	-		Pf6N2E2_3714	0.66	+0.3
4,327,598	-		Pf6N2E2_3714	0.66	-0.3
4,327,598	-		Pf6N2E2_3714	0.66	+0.2
4,327,599	+		Pf6N2E2_3714	0.66	-0.9
4,327,599	+		Pf6N2E2_3714	0.66	-1.1
4,327,600	-		Pf6N2E2_3714	0.66	+0.8
4,327,641	+		Pf6N2E2_3714	0.73	-0.4
4,327,700	-		Pf6N2E2_3714	0.84	-0.5
4,327,700	-		Pf6N2E2_3714	0.84	+0.7