Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2329

Experiment: Calcium chloride 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Calcium chloride 0.0125 M
2,751,695	-				-0.7
2,751,695	-				+0.5
2,751,747	+				-0.9
2,751,748	-				-1.5
2,751,748	-				+0.4
2,751,748	-				-0.0
2,751,748	-				-0.5
2,751,757	-				+1.1
2,751,757	-				-0.2
2,751,810	+				+1.1
2,751,811	-				-0.6
2,751,904	-				-0.1
2,751,904	-				+1.1
2,751,959	+				-1.0
2,751,959	+				+0.1
2,751,959	+				-0.4
2,751,959	+				-0.7
2,751,959	+				-0.5
2,751,959	+				-0.3
2,751,959	+				-0.6
2,751,960	-				-0.3
2,751,960	-				+1.3
2,751,960	-				+1.8
2,751,960	-				+0.0
2,751,960	-				+0.7
2,751,960	-				-0.7
2,751,960	-				-0.9
2,752,058	+				+0.1
2,752,058	+				-0.1
2,752,058	+				+0.1
2,752,059	-				+0.6
2,752,059	-				-0.9
2,752,066	+				+0.5
2,752,066	+				-1.3
2,752,066	+				-0.4
2,752,067	-				-0.0
2,752,067	-				+0.6
2,752,067	-				-0.1
2,752,067	-				-0.5
2,752,102	+				+2.0
2,752,102	+				-0.8
2,752,103	-				+0.6
2,752,103	-				-0.8
2,752,202	+				-1.3
2,752,203	-				+0.1
2,752,203	-				-0.0
2,752,219	+				-0.2
2,752,219	+				+0.1
2,752,219	+				-0.1
2,752,220	-				-0.2
2,752,220	-				+1.0
2,752,220	-				+0.2
2,752,221	+				+0.2
2,752,221	+				-0.3
2,752,221	+				-1.3
2,752,222	-				-0.1
2,752,222	-				+0.4
2,752,225	+				+0.1
2,752,226	-				-1.0
2,752,323	+				-0.4
2,752,323	+				+0.9
2,752,323	+				+0.7
2,752,323	+				+0.3
2,752,323	+				+0.7
2,752,323	+				+0.4
2,752,323	+				-1.1
2,752,323	+				-0.3
2,752,323	+				+0.2
2,752,323	+				-0.4
2,752,323	+				-1.5
2,752,323	+				-1.0
2,752,324	-				-0.4
2,752,324	-				-0.2
2,752,324	-				+0.3
2,752,324	-				-0.6
2,752,324	-				+0.3
2,752,324	-				-0.0
2,752,324	-				-0.2
2,752,324	-				+0.0
2,752,324	-				+0.4
2,752,324	-				-0.1
2,752,324	-				-0.2
2,752,324	-				-0.3
2,752,324	-				-1.1
2,752,324	-				-0.7
2,752,324	-				+0.8
2,752,324	-				+1.0
2,752,327	+				-0.9
2,752,327	+				-1.5
2,752,327	+				+0.1
2,752,327	+				-1.1
2,752,328	-				+0.4
2,752,328	-				-0.1
2,752,328	-				-0.2
2,752,328	-				+0.1
2,752,328	-				-0.3
2,752,432	+				-1.0
2,752,432	+				+0.0
2,752,432	+				+0.4
2,752,432	+				+0.2
2,752,528	+				-0.3
2,752,529	-				-0.0
2,752,529	-				+0.3
2,752,529	-				+0.2
2,752,529	-				-0.3
2,752,672	+				-1.5
2,752,673	-				-0.3
2,752,673	-				-0.1
2,753,023	-		Pf6N2E2_2329	0.28	-1.4
2,753,096	+		Pf6N2E2_2329	0.32	-1.9
2,753,097	-		Pf6N2E2_2329	0.32	+0.5
2,753,097	-		Pf6N2E2_2329	0.32	-0.7
2,753,155	-		Pf6N2E2_2329	0.36	-1.8
2,753,449	+		Pf6N2E2_2329	0.52	-0.0
2,753,449	+		Pf6N2E2_2329	0.52	-0.5
2,753,450	-		Pf6N2E2_2329	0.52	-0.3
2,753,450	-		Pf6N2E2_2329	0.52	+0.2
2,753,450	-		Pf6N2E2_2329	0.52	-2.3
2,753,691	-		Pf6N2E2_2329	0.66	+0.1
2,753,854	+		Pf6N2E2_2329	0.75	-1.1
2,753,854	+		Pf6N2E2_2329	0.75	-0.6
2,753,854	+		Pf6N2E2_2329	0.75	-2.0
2,753,854	+		Pf6N2E2_2329	0.75	-0.3
2,753,854	+		Pf6N2E2_2329	0.75	+0.3
2,753,855	-		Pf6N2E2_2329	0.75	-1.4
2,753,855	-		Pf6N2E2_2329	0.75	-0.2
2,753,855	-		Pf6N2E2_2329	0.75	-2.1
2,753,855	-		Pf6N2E2_2329	0.75	-0.6
2,753,855	-		Pf6N2E2_2329	0.75	-0.4
2,753,975	+		Pf6N2E2_2329	0.82	+0.7
2,753,975	+		Pf6N2E2_2329	0.82	-1.0
2,754,016	+		Pf6N2E2_2329	0.85	-0.3
2,754,017	-		Pf6N2E2_2329	0.85	-0.2
2,754,017	-		Pf6N2E2_2329	0.85	-2.0
2,754,017	-		Pf6N2E2_2329	0.85	-0.6
2,754,023	+		Pf6N2E2_2329	0.85	-0.5
2,754,199	+				-0.8
2,754,199	+				-0.5
2,754,199	+				+0.7
2,754,199	+				+0.1
2,754,200	-				-0.3
2,754,200	-				-0.3
2,754,200	-				-0.8
2,754,262	+				+0.4
2,754,350	+				+0.9
2,754,350	+				-0.0
2,754,350	+				+0.1
2,754,398	+				-0.5
2,754,398	+				+1.3
2,754,399	-				+0.3
2,754,491	+				+0.3
2,754,492	-				-0.8
2,754,492	-				+2.5
2,754,539	+				-0.0
2,754,539	+				+0.5
2,754,540	-				-0.5
2,754,540	-				+1.3
2,754,670	+		Pf6N2E2_2330	0.18	+0.2
2,754,741	-		Pf6N2E2_2330	0.40	+0.2
2,754,741	-		Pf6N2E2_2330	0.40	-2.3
2,754,741	-		Pf6N2E2_2330	0.40	+0.2
2,754,741	-		Pf6N2E2_2330	0.40	+0.6
2,754,789	+		Pf6N2E2_2330	0.56	-1.7
2,754,790	-		Pf6N2E2_2330	0.56	+1.9
2,754,790	-		Pf6N2E2_2330	0.56	+0.1
2,754,790	-		Pf6N2E2_2330	0.56	-1.7
2,754,842	+		Pf6N2E2_2330	0.72	-0.7
2,754,843	-		Pf6N2E2_2330	0.73	+1.0
2,754,843	-		Pf6N2E2_2330	0.73	+0.7
2,754,858	+		Pf6N2E2_2330	0.77	-0.3
2,754,858	+		Pf6N2E2_2330	0.77	-1.8
2,754,859	-		Pf6N2E2_2330	0.78	+0.2
2,754,859	-		Pf6N2E2_2330	0.78	+1.1
2,754,943	-				+1.5
2,755,071	-				+0.5
2,755,095	+				+0.2
2,755,095	+				-2.0
2,755,096	-				+0.0
2,755,105	-				+0.2
2,755,105	-				-0.4
2,755,105	-				-1.3
2,755,122	+				-0.6
2,755,197	+				+0.1
2,755,198	-				+0.3
2,755,198	-				+0.6
2,755,198	-				-0.2
2,755,213	+				-0.8
2,755,213	+				+0.2
2,755,214	-				-1.5
2,755,239	-				-0.4