Strain Fitness in Pantoea sp. MT58 around IAI47_13765

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,914,643	-		IAI47_13755	0.63	+1.5
2,914,666	-		IAI47_13755	0.65	+1.8
2,914,670	-		IAI47_13755	0.65	+1.7
2,914,670	-		IAI47_13755	0.65	+5.0
2,914,670	-		IAI47_13755	0.65	+1.6
2,914,717	-		IAI47_13755	0.68	+1.8
2,914,797	+		IAI47_13755	0.72	+2.6
2,914,798	-		IAI47_13755	0.72	+2.4
2,914,798	-		IAI47_13755	0.72	+2.6
2,914,842	+		IAI47_13755	0.75	+2.6
2,914,871	-		IAI47_13755	0.76	+2.2
2,914,892	-		IAI47_13755	0.77	+2.1
2,915,029	+		IAI47_13755	0.85	+2.7
2,915,029	+		IAI47_13755	0.85	+2.2
2,915,029	+		IAI47_13755	0.85	+2.4
2,915,030	-		IAI47_13755	0.85	+3.1
2,915,030	-		IAI47_13755	0.85	+3.0
2,915,030	-		IAI47_13755	0.85	+3.6
2,915,030	-		IAI47_13755	0.85	+2.1
2,915,030	-		IAI47_13755	0.85	+3.3
2,915,030	-		IAI47_13755	0.85	+2.4
2,915,030	-		IAI47_13755	0.85	+3.0
2,915,030	-		IAI47_13755	0.85	+2.8
2,915,031	+		IAI47_13755	0.85	+2.8
2,915,031	+		IAI47_13755	0.85	+2.2
2,915,032	-		IAI47_13755	0.85	+2.9
2,915,032	-		IAI47_13755	0.85	+2.1
2,915,032	-		IAI47_13755	0.85	+2.1
2,915,059	-		IAI47_13755	0.87	+3.4
2,915,059	-		IAI47_13755	0.87	+3.2
2,915,083	-		IAI47_13755	0.88	+3.4
2,915,083	-		IAI47_13755	0.88	+2.5
2,915,083	-		IAI47_13755	0.88	+1.9
2,915,083	-		IAI47_13755	0.88	+2.8
2,915,083	-		IAI47_13755	0.88	+1.9
2,915,086	+		IAI47_13755	0.88	+3.3
2,915,087	-		IAI47_13755	0.88	+2.4
2,915,087	-		IAI47_13755	0.88	+1.9
2,915,087	-		IAI47_13755	0.88	+2.1
2,915,087	-		IAI47_13755	0.88	+3.1
2,915,102	-		IAI47_13755	0.89	+2.3
2,915,114	-				+5.1
2,915,114	-				+2.9
2,915,117	-				+0.2
2,915,132	-				+2.1
2,915,151	-				+1.6
2,915,151	-				+2.6
2,915,320	-				+1.8
2,915,328	+		IAI47_13760	0.11	+3.0
2,915,391	+		IAI47_13760	0.29	+1.8
2,915,392	-		IAI47_13760	0.29	+1.6
2,915,392	-		IAI47_13760	0.29	+2.1
2,915,505	+		IAI47_13760	0.61	+3.1
2,915,505	+		IAI47_13760	0.61	+2.7
2,915,505	+		IAI47_13760	0.61	+3.5
2,915,506	-		IAI47_13760	0.62	+2.4
2,915,545	-		IAI47_13760	0.73	+1.8
2,915,554	-		IAI47_13760	0.76	+6.0
2,915,554	-		IAI47_13760	0.76	+1.5
2,915,554	-		IAI47_13760	0.76	+2.7
2,915,561	-		IAI47_13760	0.78	+2.0
2,915,634	-				+3.6
2,915,634	-				+1.8
2,915,639	-				+2.7
2,915,748	+		IAI47_13765	0.30	+3.1
2,915,749	-		IAI47_13765	0.30	+2.9
2,915,749	-		IAI47_13765	0.30	+2.1
2,915,749	-		IAI47_13765	0.30	+1.8
2,915,902	-		IAI47_13765	0.69	+3.9
2,915,902	-		IAI47_13765	0.69	+1.8
2,915,918	-		IAI47_13765	0.73	+1.3
2,915,918	-		IAI47_13765	0.73	+3.0
2,915,948	-		IAI47_13765	0.81	+3.0
2,916,120	+				+2.6
2,916,121	-				+3.9
2,916,121	-				+2.1
2,916,186	+				+0.7
2,916,188	+				+3.2
2,916,189	-				+2.4
2,916,233	+				+0.5
2,916,233	+				+1.6
2,916,235	+				+0.3
2,916,244	+				+2.0
2,916,244	+				+2.1
2,916,244	+				+2.9
2,916,244	+				+2.4
2,916,245	-				+0.6
2,916,258	+				+1.0
2,916,280	+				-1.6
2,916,331	+				+2.1
2,916,340	-				+1.9
2,916,347	+				+0.7
2,916,347	+				-0.6
2,916,348	-				+0.9
2,916,348	-				-0.9
2,916,395	-				-0.5
2,916,395	-				-0.8
2,916,398	+				-0.4
2,916,399	-				+0.9
2,916,399	-				-0.5
2,916,419	+				-0.4
2,916,419	+				+1.1
2,916,420	-				+1.1
2,916,452	+				+1.3
2,916,452	+				-0.7
2,916,453	-				+0.3
2,916,453	-				+0.1
2,916,453	-				+0.8
2,916,453	-				+2.1
2,916,538	+				+2.0
2,916,538	+				+2.6
2,916,538	+				+0.8
2,916,570	+				+0.2
2,916,570	+				+1.9
2,916,570	+				+0.9
2,916,570	+				+0.7
2,916,570	+				-1.1
2,916,570	+				+1.8
2,916,570	+				+0.6
2,916,571	-				+0.1
2,916,571	-				-1.4
2,916,571	-				-1.2
2,916,577	+				+2.7
2,916,577	+				+0.3
2,916,578	-				+0.7
2,916,616	+				+0.2
2,916,616	+				+1.3
2,916,617	-				+1.8
2,916,626	+				+2.2
2,916,626	+				+0.3
2,916,626	+				+0.7
2,916,627	-				+4.5
2,916,627	-				-1.1
2,916,630	+				+0.3
2,916,630	+				-0.1
2,916,630	+				+2.6
2,916,630	+				+1.4
2,916,630	+				-0.5
2,916,631	-				-2.2
2,916,631	-				-0.7
2,916,631	-				-2.4
2,916,631	-				-1.4
2,916,634	+				-0.2
2,916,634	+				+2.2
2,916,634	+				+0.9
2,916,634	+				-0.1
2,916,634	+				-0.6
2,916,634	+				+0.1
2,916,635	-				-0.8
2,916,635	-				-1.8
2,916,635	-				-0.4
2,916,642	+				+0.1
2,916,663	+				+0.7
2,916,663	+				+0.5
2,916,664	-				-1.2
2,916,678	-				+0.1
2,916,699	+				+0.3
2,916,699	+				+0.7
2,916,699	+				-0.1
2,916,699	+				-0.4
2,916,699	+				+0.5
2,916,699	+				-0.9
2,916,700	-				-1.5
2,916,700	-				-1.4
2,916,700	-				-1.0
2,916,700	-				+0.3
2,916,700	-				+0.3
2,916,700	-				-1.8
2,916,700	-				-1.4
2,916,724	-				+1.1
2,916,796	-		IAI47_13770	0.11	+0.8
2,916,796	-		IAI47_13770	0.11	-0.2
2,916,796	-		IAI47_13770	0.11	-1.2
2,916,796	-		IAI47_13770	0.11	-1.2
2,916,796	-		IAI47_13770	0.11	-0.1
2,916,801	+		IAI47_13770	0.11	-1.6
2,916,801	+		IAI47_13770	0.11	+0.6
2,916,831	+		IAI47_13770	0.14	-0.6
2,916,832	-		IAI47_13770	0.14	+2.5
2,916,850	-		IAI47_13770	0.15	-1.4
2,916,850	-		IAI47_13770	0.15	-0.7
2,916,857	+		IAI47_13770	0.16	+0.8
2,916,858	-		IAI47_13770	0.16	-1.5
2,916,874	-		IAI47_13770	0.17	-1.0
2,916,874	-		IAI47_13770	0.17	-1.2
2,916,897	+		IAI47_13770	0.19	-0.4
2,916,897	+		IAI47_13770	0.19	+0.3
2,916,897	+		IAI47_13770	0.19	-1.1
2,916,897	+		IAI47_13770	0.19	-0.6
2,916,898	-		IAI47_13770	0.19	-0.9
2,916,898	-		IAI47_13770	0.19	-0.9
2,916,898	-		IAI47_13770	0.19	+2.1
2,916,898	-		IAI47_13770	0.19	+0.9
2,916,898	-		IAI47_13770	0.19	-0.6
2,916,916	+		IAI47_13770	0.20	+0.2
2,916,917	-		IAI47_13770	0.20	-1.6
2,917,008	+		IAI47_13770	0.27	-1.1