Strain Fitness in Pantoea sp. MT58 around IAI47_09825

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,078,726	+		IAI47_09820	0.59	+0.7
2,078,727	-		IAI47_09820	0.59	-1.4
2,078,769	+		IAI47_09820	0.60	-0.4
2,078,769	+		IAI47_09820	0.60	-0.0
2,078,769	+		IAI47_09820	0.60	+0.4
2,078,770	-		IAI47_09820	0.60	-1.3
2,078,858	-		IAI47_09820	0.64	-0.7
2,078,858	-		IAI47_09820	0.64	+0.6
2,078,858	-		IAI47_09820	0.64	-0.6
2,078,858	-		IAI47_09820	0.64	+1.1
2,078,866	+		IAI47_09820	0.65	+0.4
2,078,866	+		IAI47_09820	0.65	+0.6
2,078,867	-		IAI47_09820	0.65	-1.1
2,078,867	-		IAI47_09820	0.65	+0.9
2,078,867	-		IAI47_09820	0.65	+0.3
2,078,888	+		IAI47_09820	0.65	+1.1
2,078,907	-		IAI47_09820	0.66	+0.2
2,078,918	+		IAI47_09820	0.67	-1.4
2,078,918	+		IAI47_09820	0.67	-1.3
2,078,919	-		IAI47_09820	0.67	+1.1
2,079,067	+		IAI47_09820	0.73	+0.6
2,079,068	-		IAI47_09820	0.73	-1.1
2,079,068	-		IAI47_09820	0.73	-0.7
2,079,087	+		IAI47_09820	0.74	+0.4
2,079,088	-		IAI47_09820	0.74	+1.0
2,079,088	-		IAI47_09820	0.74	-0.7
2,079,088	-		IAI47_09820	0.74	+0.3
2,079,153	+		IAI47_09820	0.77	-0.1
2,079,153	+		IAI47_09820	0.77	-1.1
2,079,153	+		IAI47_09820	0.77	+1.4
2,079,154	-		IAI47_09820	0.77	-0.1
2,079,154	-		IAI47_09820	0.77	+1.0
2,079,174	+		IAI47_09820	0.78	-0.1
2,079,175	-		IAI47_09820	0.78	+1.6
2,079,207	+		IAI47_09820	0.79	-0.7
2,079,207	+		IAI47_09820	0.79	+0.7
2,079,207	+		IAI47_09820	0.79	+1.4
2,079,207	+		IAI47_09820	0.79	+0.6
2,079,207	+		IAI47_09820	0.79	-1.7
2,079,207	+		IAI47_09820	0.79	+1.0
2,079,208	-		IAI47_09820	0.79	+0.5
2,079,208	-		IAI47_09820	0.79	-0.1
2,079,208	-		IAI47_09820	0.79	-1.1
2,079,208	-		IAI47_09820	0.79	+0.2
2,079,208	-		IAI47_09820	0.79	+0.1
2,079,208	-		IAI47_09820	0.79	+0.2
2,079,208	-		IAI47_09820	0.79	+0.3
2,079,208	-		IAI47_09820	0.79	-0.4
2,079,208	-		IAI47_09820	0.79	-0.4
2,079,208	-		IAI47_09820	0.79	-0.0
2,079,210	+		IAI47_09820	0.79	-2.1
2,079,210	+		IAI47_09820	0.79	+0.1
2,079,210	+		IAI47_09820	0.79	+0.4
2,079,213	+		IAI47_09820	0.79	+0.7
2,079,213	+		IAI47_09820	0.79	+2.0
2,079,213	+		IAI47_09820	0.79	-1.0
2,079,213	+		IAI47_09820	0.79	-1.0
2,079,213	+		IAI47_09820	0.79	+0.2
2,079,213	+		IAI47_09820	0.79	+1.0
2,079,213	+		IAI47_09820	0.79	-0.2
2,079,214	-		IAI47_09820	0.79	-0.2
2,079,214	-		IAI47_09820	0.79	+0.4
2,079,214	-		IAI47_09820	0.79	-0.7
2,079,214	-		IAI47_09820	0.79	-1.8
2,079,214	-				+0.1
2,079,214	-		IAI47_09820	0.79	+1.2
2,079,257	-		IAI47_09820	0.81	+1.1
2,079,437	+		IAI47_09820	0.89	+0.5
2,079,438	-		IAI47_09820	0.89	+0.3
2,079,551	+				-0.0
2,079,552	-				-0.5
2,079,552	-				-0.0
2,079,552	-				-0.6
2,079,557	-				-0.2
2,079,562	+				+0.1
2,079,563	-				-0.4
2,079,563	-				+0.2
2,079,563	-				+1.8
2,079,563	-				+0.1
2,079,563	-				-0.3
2,079,641	+				+0.4
2,079,697	+				-0.2
2,079,697	+				+0.3
2,079,697	+				+0.6
2,079,697	+				+0.4
2,079,697	+				-0.4
2,079,697	+				-0.1
2,079,698	-				-1.1
2,079,698	-				+1.0
2,079,698	-				-0.0
2,079,698	-				-0.9
2,079,698	-				+1.2
2,079,711	-				-1.5
2,079,769	-		IAI47_09825	0.10	-1.0
2,079,769	-		IAI47_09825	0.10	-1.0
2,079,870	+		IAI47_09825	0.23	-0.0
2,079,870	+		IAI47_09825	0.23	+0.5
2,080,013	+		IAI47_09825	0.41	-0.5
2,080,013	+		IAI47_09825	0.41	-1.0
2,080,013	+		IAI47_09825	0.41	-0.1
2,080,014	-		IAI47_09825	0.42	+1.0
2,080,014	-		IAI47_09825	0.42	+0.6
2,080,133	+		IAI47_09825	0.57	-1.1
2,080,133	+		IAI47_09825	0.57	-0.2
2,080,134	-		IAI47_09825	0.57	+0.6
2,080,192	+		IAI47_09825	0.64	-1.2
2,080,192	+		IAI47_09825	0.64	+0.5
2,080,192	+		IAI47_09825	0.64	+1.1
2,080,193	-		IAI47_09825	0.65	-0.0
2,080,193	-		IAI47_09825	0.65	-0.3
2,080,193	-		IAI47_09825	0.65	-0.5
2,080,193	-		IAI47_09825	0.65	-1.7
2,080,197	+		IAI47_09825	0.65	-0.4
2,080,197	+		IAI47_09825	0.65	+1.2
2,080,197	+		IAI47_09825	0.65	-1.1
2,080,198	-		IAI47_09825	0.65	+0.9
2,080,198	-		IAI47_09825	0.65	-1.1
2,080,198	-		IAI47_09825	0.65	-0.5
2,080,198	-		IAI47_09825	0.65	-1.0
2,080,198	-		IAI47_09825	0.65	+0.5
2,080,198	-		IAI47_09825	0.65	+0.0
2,080,198	-		IAI47_09825	0.65	+0.7
2,080,198	-		IAI47_09825	0.65	-0.1
2,080,198	-		IAI47_09825	0.65	+1.3
2,080,200	+		IAI47_09825	0.66	-0.2
2,080,201	-		IAI47_09825	0.66	-0.2
2,080,201	-		IAI47_09825	0.66	-0.3
2,080,281	-		IAI47_09825	0.76	-0.9
2,080,281	-		IAI47_09825	0.76	-0.0
2,080,389	+		IAI47_09825	0.90	-1.7
2,080,458	+				+1.5
2,080,458	+				-0.4
2,080,458	+				-0.1
2,080,458	+				+1.0
2,080,459	-				-0.5
2,080,459	-				+0.7
2,080,459	-				+2.0
2,080,459	-				+2.0
2,080,459	-				+1.6
2,080,556	+				-1.6
2,080,557	-				+0.6
2,080,575	+				+0.1
2,080,576	-				+2.5
2,080,576	-				+2.6
2,080,576	-				+0.5
2,080,576	-				+0.2
2,080,601	-				-1.5
2,080,601	-				-0.7
2,080,601	-				+0.5
2,080,701	-				+1.5
2,080,701	-				-0.7
2,080,782	-		IAI47_09830	0.12	-0.0
2,080,791	+		IAI47_09830	0.13	-0.2
2,080,792	-		IAI47_09830	0.13	-0.2
2,080,792	-		IAI47_09830	0.13	+0.5
2,080,792	-		IAI47_09830	0.13	-0.7
2,080,792	-		IAI47_09830	0.13	+0.7
2,080,816	+		IAI47_09830	0.14	+0.6
2,080,817	-		IAI47_09830	0.14	+0.6
2,080,817	-		IAI47_09830	0.14	-1.8
2,080,817	-		IAI47_09830	0.14	-0.1
2,080,891	-		IAI47_09830	0.18	-0.2
2,080,891	-		IAI47_09830	0.18	-0.6
2,080,904	+		IAI47_09830	0.18	-1.0
2,080,905	-		IAI47_09830	0.18	-0.5
2,081,000	+		IAI47_09830	0.23	-0.2
2,081,000	+		IAI47_09830	0.23	-0.2
2,081,001	-		IAI47_09830	0.23	+0.3
2,081,001	-		IAI47_09830	0.23	-0.9
2,081,001	-		IAI47_09830	0.23	-0.1
2,081,134	+		IAI47_09830	0.30	+0.9
2,081,134	+		IAI47_09830	0.30	+0.5
2,081,135	-		IAI47_09830	0.30	+0.9
2,081,314	+		IAI47_09830	0.38	+2.9
2,081,315	-		IAI47_09830	0.38	-0.4
2,081,367	+		IAI47_09830	0.41	+0.4
2,081,367	+		IAI47_09830	0.41	+1.4
2,081,367	+		IAI47_09830	0.41	-0.4
2,081,367	+		IAI47_09830	0.41	-0.1
2,081,368	-		IAI47_09830	0.41	+0.0
2,081,368	-		IAI47_09830	0.41	+0.3
2,081,368	-		IAI47_09830	0.41	-0.5
2,081,368	-		IAI47_09830	0.41	-0.4
2,081,368	-		IAI47_09830	0.41	+1.1
2,081,368	-		IAI47_09830	0.41	+0.3
2,081,368	-		IAI47_09830	0.41	-0.3
2,081,426	+		IAI47_09830	0.44	+0.5
2,081,427	-		IAI47_09830	0.44	+0.2