Strain Fitness in Paraburkholderia bryophila 376MFSha3.1 around H281DRAFT_06584

Experiment: Malonic (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntH281DRAFT_06583 and H281DRAFT_06584 are separated by 333 nucleotides H281DRAFT_06583: H281DRAFT_06583 - 2-haloacid dehalogenase, at 24,957 to 25,688 _06583 H281DRAFT_06584: H281DRAFT_06584 - Transposase DDE domain-containing protein, at 26,022 to 26,726 _06584 Position (kb) 26 27Strain fitness (log2 ratio) -3 -2 -1 0 1at 25.030 kb on - strandat 25.133 kb on + strand, within H281DRAFT_06583at 25.134 kb on - strand, within H281DRAFT_06583at 25.185 kb on + strand, within H281DRAFT_06583at 25.461 kb on + strand, within H281DRAFT_06583at 25.629 kb on + strandat 25.629 kb on + strandat 25.630 kb on - strandat 25.630 kb on - strandat 25.630 kb on - strandat 25.630 kb on - strandat 25.630 kb on - strandat 25.682 kb on + strandat 25.683 kb on - strandat 25.723 kb on - strandat 25.741 kb on - strandat 26.498 kb on + strand, within H281DRAFT_06584

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Per-strain Table

Position Strand Gene LocusTag Fraction Malonic (C)
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25,030 - +0.3
25,133 + H281DRAFT_06583 0.24 -0.4
25,134 - H281DRAFT_06583 0.24 +0.6
25,185 + H281DRAFT_06583 0.31 -0.2
25,461 + H281DRAFT_06583 0.69 -2.0
25,629 + -2.2
25,629 + -0.7
25,630 - +0.5
25,630 - -1.1
25,630 - +0.5
25,630 - -1.6
25,630 - -0.1
25,682 + -3.2
25,683 - +1.3
25,723 - +0.3
25,741 - -0.5
26,498 + H281DRAFT_06584 0.68 +1.2

Or see this region's nucleotide sequence