Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_06090 and H281DRAFT_06091 are separated by 89 nucleotides H281DRAFT_06091 and H281DRAFT_06092 are separated by 328 nucleotides
H281DRAFT_06090: H281DRAFT_06090 - N-ethylmaleimide reductase, at 107,556 to 108,770
_06090
H281DRAFT_06091: H281DRAFT_06091 - Protein required for attachment to host cells, at 108,860 to 109,216
_06091
H281DRAFT_06092: H281DRAFT_06092 - Outer membrane protein (porin), at 109,545 to 110,672
_06092
Position (kb)
108
109
110 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 108.082 kb on - strand, within H281DRAFT_06090 at 108.097 kb on - strand, within H281DRAFT_06090 at 108.166 kb on - strand, within H281DRAFT_06090 at 108.216 kb on + strand, within H281DRAFT_06090 at 108.217 kb on - strand, within H281DRAFT_06090 at 108.369 kb on + strand, within H281DRAFT_06090 at 108.406 kb on - strand, within H281DRAFT_06090 at 108.769 kb on - strand at 108.928 kb on + strand, within H281DRAFT_06091 at 109.031 kb on + strand, within H281DRAFT_06091 at 109.031 kb on + strand, within H281DRAFT_06091 at 109.032 kb on - strand, within H281DRAFT_06091 at 109.071 kb on + strand, within H281DRAFT_06091 at 109.235 kb on + strand at 109.236 kb on - strand at 109.236 kb on - strand at 109.245 kb on + strand at 109.324 kb on - strand at 109.337 kb on + strand at 109.430 kb on + strand at 109.495 kb on + strand at 109.539 kb on + strand at 109.626 kb on + strand at 109.626 kb on + strand at 109.653 kb on + strand at 109.842 kb on + strand, within H281DRAFT_06092 at 109.843 kb on - strand, within H281DRAFT_06092 at 109.893 kb on + strand, within H281DRAFT_06092 at 109.971 kb on + strand, within H281DRAFT_06092 at 109.972 kb on - strand, within H281DRAFT_06092 at 109.994 kb on + strand, within H281DRAFT_06092 at 109.994 kb on + strand, within H281DRAFT_06092 at 109.994 kb on + strand, within H281DRAFT_06092 at 110.038 kb on - strand, within H281DRAFT_06092 at 110.064 kb on + strand, within H281DRAFT_06092 at 110.064 kb on + strand, within H281DRAFT_06092 at 110.064 kb on + strand, within H281DRAFT_06092 at 110.065 kb on - strand, within H281DRAFT_06092 at 110.065 kb on - strand, within H281DRAFT_06092 at 110.065 kb on - strand, within H281DRAFT_06092 at 110.065 kb on - strand, within H281DRAFT_06092 at 110.199 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 108,082 - H281DRAFT_06090 0.43 -1.4 108,097 - H281DRAFT_06090 0.45 +1.7 108,166 - H281DRAFT_06090 0.50 +1.2 108,216 + H281DRAFT_06090 0.54 -0.3 108,217 - H281DRAFT_06090 0.54 +1.2 108,369 + H281DRAFT_06090 0.67 -0.5 108,406 - H281DRAFT_06090 0.70 +2.6 108,769 - -0.5 108,928 + H281DRAFT_06091 0.19 -0.5 109,031 + H281DRAFT_06091 0.48 +0.1 109,031 + H281DRAFT_06091 0.48 +0.5 109,032 - H281DRAFT_06091 0.48 -0.3 109,071 + H281DRAFT_06091 0.59 -2.0 109,235 + +1.1 109,236 - +1.1 109,236 - +0.2 109,245 + -0.8 109,324 - -1.7 109,337 + -1.8 109,430 + +0.9 109,495 + -0.9 109,539 + -1.2 109,626 + +0.1 109,626 + -1.2 109,653 + +1.2 109,842 + H281DRAFT_06092 0.26 +0.4 109,843 - H281DRAFT_06092 0.26 -1.5 109,893 + H281DRAFT_06092 0.31 -2.6 109,971 + H281DRAFT_06092 0.38 -0.1 109,972 - H281DRAFT_06092 0.38 +0.4 109,994 + H281DRAFT_06092 0.40 -1.2 109,994 + H281DRAFT_06092 0.40 -0.2 109,994 + H281DRAFT_06092 0.40 +0.6 110,038 - H281DRAFT_06092 0.44 +0.5 110,064 + H281DRAFT_06092 0.46 -0.3 110,064 + H281DRAFT_06092 0.46 +0.2 110,064 + H281DRAFT_06092 0.46 -0.3 110,065 - H281DRAFT_06092 0.46 -0.2 110,065 - H281DRAFT_06092 0.46 +0.4 110,065 - H281DRAFT_06092 0.46 +0.4 110,065 - H281DRAFT_06092 0.46 +1.0 110,199 - +1.0
Or see this region's nucleotide sequence