Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_05763 and H281DRAFT_05764 are separated by 10 nucleotides H281DRAFT_05764 and H281DRAFT_05765 are separated by 42 nucleotides H281DRAFT_05765 and H281DRAFT_05766 are separated by 20 nucleotides H281DRAFT_05766 and H281DRAFT_05767 are separated by 100 nucleotides
H281DRAFT_05763: H281DRAFT_05763 - flagellar basal-body rod protein FlgC, at 36,869 to 37,294
_05763
H281DRAFT_05764: H281DRAFT_05764 - flagellar basal-body rod modification protein FlgD, at 37,305 to 38,036
_05764
H281DRAFT_05765: H281DRAFT_05765 - flagellar hook protein FlgE, at 38,079 to 39,587
_05765
H281DRAFT_05766: H281DRAFT_05766 - flagellar basal-body rod protein FlgF, at 39,608 to 40,366
_05766
H281DRAFT_05767: H281DRAFT_05767 - flagellar basal-body rod protein FlgG, at 40,467 to 41,255
_05767
Position (kb) 38
39
40 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 37.157 kb on + strand, within H281DRAFT_05763 at 37.158 kb on - strand, within H281DRAFT_05763 at 37.365 kb on - strand at 37.872 kb on + strand, within H281DRAFT_05764 at 37.873 kb on - strand, within H281DRAFT_05764 at 37.970 kb on + strand at 37.970 kb on + strand at 38.035 kb on - strand at 38.053 kb on - strand at 38.163 kb on - strand at 38.163 kb on - strand at 38.205 kb on + strand at 38.206 kb on - strand at 38.206 kb on - strand at 38.480 kb on + strand, within H281DRAFT_05765 at 38.502 kb on - strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.688 kb on + strand, within H281DRAFT_05765 at 38.689 kb on - strand, within H281DRAFT_05765 at 38.689 kb on - strand, within H281DRAFT_05765 at 38.763 kb on + strand, within H281DRAFT_05765 at 38.763 kb on + strand, within H281DRAFT_05765 at 38.764 kb on - strand, within H281DRAFT_05765 at 38.764 kb on - strand, within H281DRAFT_05765 at 38.841 kb on + strand, within H281DRAFT_05765 at 38.841 kb on + strand, within H281DRAFT_05765 at 38.841 kb on + strand at 38.841 kb on + strand, within H281DRAFT_05765 at 38.841 kb on + strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.842 kb on - strand, within H281DRAFT_05765 at 38.843 kb on + strand, within H281DRAFT_05765 at 38.844 kb on - strand, within H281DRAFT_05765 at 38.892 kb on + strand, within H281DRAFT_05765 at 38.893 kb on - strand, within H281DRAFT_05765 at 38.893 kb on - strand, within H281DRAFT_05765 at 38.898 kb on + strand, within H281DRAFT_05765 at 38.898 kb on + strand, within H281DRAFT_05765 at 38.919 kb on + strand, within H281DRAFT_05765 at 39.186 kb on + strand, within H281DRAFT_05765 at 39.289 kb on - strand, within H281DRAFT_05765 at 39.371 kb on + strand, within H281DRAFT_05765 at 39.522 kb on + strand at 39.523 kb on - strand at 39.523 kb on - strand at 39.523 kb on - strand at 39.623 kb on + strand at 39.920 kb on + strand, within H281DRAFT_05766 at 40.360 kb on + strand at 40.361 kb on - strand at 40.415 kb on + strand at 40.415 kb on + strand at 40.415 kb on + strand at 40.416 kb on - strand at 40.416 kb on - strand at 40.416 kb on - strand at 40.416 kb on - strand at 40.454 kb on + strand at 40.454 kb on + strand at 40.467 kb on - strand at 40.482 kb on + strand at 40.483 kb on - strand at 40.483 kb on - strand at 40.483 kb on - strand at 40.484 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 37,157 + H281DRAFT_05763 0.68 +1.0 37,158 - H281DRAFT_05763 0.68 +0.6 37,365 - +1.1 37,872 + H281DRAFT_05764 0.77 -1.3 37,873 - H281DRAFT_05764 0.78 -0.4 37,970 + -0.1 37,970 + +1.5 38,035 - +1.9 38,053 - +1.3 38,163 - +0.3 38,163 - +0.7 38,205 + +0.9 38,206 - +0.5 38,206 - +1.0 38,480 + H281DRAFT_05765 0.27 +0.0 38,502 - H281DRAFT_05765 0.28 +0.4 38,688 + H281DRAFT_05765 0.40 +0.3 38,688 + H281DRAFT_05765 0.40 +1.3 38,688 + H281DRAFT_05765 0.40 +0.5 38,688 + H281DRAFT_05765 0.40 +1.0 38,688 + H281DRAFT_05765 0.40 +0.1 38,689 - H281DRAFT_05765 0.40 +0.0 38,689 - H281DRAFT_05765 0.40 -0.7 38,763 + H281DRAFT_05765 0.45 +0.9 38,763 + H281DRAFT_05765 0.45 +1.3 38,764 - H281DRAFT_05765 0.45 +0.7 38,764 - H281DRAFT_05765 0.45 -0.4 38,841 + H281DRAFT_05765 0.50 +1.9 38,841 + H281DRAFT_05765 0.50 +0.3 38,841 + +2.9 38,841 + H281DRAFT_05765 0.50 +0.4 38,841 + H281DRAFT_05765 0.50 +0.1 38,842 - H281DRAFT_05765 0.51 +1.3 38,842 - H281DRAFT_05765 0.51 +2.4 38,842 - H281DRAFT_05765 0.51 +0.6 38,842 - H281DRAFT_05765 0.51 +1.3 38,842 - H281DRAFT_05765 0.51 +0.4 38,842 - H281DRAFT_05765 0.51 +0.1 38,842 - H281DRAFT_05765 0.51 +1.4 38,843 + H281DRAFT_05765 0.51 +0.6 38,844 - H281DRAFT_05765 0.51 +1.1 38,892 + H281DRAFT_05765 0.54 +0.7 38,893 - H281DRAFT_05765 0.54 +1.4 38,893 - H281DRAFT_05765 0.54 +0.8 38,898 + H281DRAFT_05765 0.54 +0.9 38,898 + H281DRAFT_05765 0.54 -0.6 38,919 + H281DRAFT_05765 0.56 +2.6 39,186 + H281DRAFT_05765 0.73 +1.7 39,289 - H281DRAFT_05765 0.80 +1.9 39,371 + H281DRAFT_05765 0.86 +0.1 39,522 + +1.2 39,523 - -1.2 39,523 - +1.3 39,523 - +0.6 39,623 + +0.9 39,920 + H281DRAFT_05766 0.41 +0.8 40,360 + +0.4 40,361 - +0.7 40,415 + -0.5 40,415 + -0.0 40,415 + +0.7 40,416 - +1.4 40,416 - +0.7 40,416 - +0.6 40,416 - +2.6 40,454 + +0.2 40,454 + +0.1 40,467 - +2.1 40,482 + -0.5 40,483 - -3.0 40,483 - -2.8 40,483 - +1.0 40,484 + +1.8
Or see this region's nucleotide sequence