Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04795 and H281DRAFT_04796 are separated by 10 nucleotides H281DRAFT_04796 and H281DRAFT_04797 are separated by 88 nucleotides
H281DRAFT_04795: H281DRAFT_04795 - hypothetical protein, at 223,077 to 224,231
_04795
H281DRAFT_04796: H281DRAFT_04796 - Polysaccharide biosynthesis protein, at 224,242 to 225,486
_04796
H281DRAFT_04797: H281DRAFT_04797 - tyrosine-protein kinase Etk/Wzc, at 225,575 to 227,827
_04797
Position (kb) 224
225
226 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 223.461 kb on - strand, within H281DRAFT_04795 at 223.490 kb on + strand, within H281DRAFT_04795 at 223.491 kb on - strand, within H281DRAFT_04795 at 223.897 kb on + strand, within H281DRAFT_04795 at 223.898 kb on - strand, within H281DRAFT_04795 at 223.988 kb on + strand, within H281DRAFT_04795 at 224.304 kb on - strand at 224.304 kb on - strand at 224.307 kb on - strand at 224.529 kb on - strand, within H281DRAFT_04796 at 224.594 kb on + strand, within H281DRAFT_04796 at 224.948 kb on + strand, within H281DRAFT_04796 at 224.949 kb on - strand, within H281DRAFT_04796 at 224.949 kb on - strand, within H281DRAFT_04796 at 225.176 kb on - strand, within H281DRAFT_04796 at 225.185 kb on + strand, within H281DRAFT_04796 at 225.407 kb on - strand at 225.543 kb on + strand at 225.543 kb on + strand at 225.544 kb on - strand at 225.544 kb on - strand at 226.094 kb on + strand, within H281DRAFT_04797 at 226.421 kb on + strand, within H281DRAFT_04797 at 226.421 kb on + strand, within H281DRAFT_04797 at 226.422 kb on - strand, within H281DRAFT_04797
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 223,461 - H281DRAFT_04795 0.33 -0.1 223,490 + H281DRAFT_04795 0.36 -1.8 223,491 - H281DRAFT_04795 0.36 +0.3 223,897 + H281DRAFT_04795 0.71 +0.0 223,898 - H281DRAFT_04795 0.71 -0.1 223,988 + H281DRAFT_04795 0.79 -3.3 224,304 - +0.5 224,304 - +0.9 224,307 - +0.3 224,529 - H281DRAFT_04796 0.23 -0.7 224,594 + H281DRAFT_04796 0.28 -0.6 224,948 + H281DRAFT_04796 0.57 +0.3 224,949 - H281DRAFT_04796 0.57 +2.1 224,949 - H281DRAFT_04796 0.57 +1.1 225,176 - H281DRAFT_04796 0.75 +0.9 225,185 + H281DRAFT_04796 0.76 -0.9 225,407 - +0.8 225,543 + -0.6 225,543 + +2.7 225,544 - -0.5 225,544 - +0.7 226,094 + H281DRAFT_04797 0.23 -0.1 226,421 + H281DRAFT_04797 0.38 -1.2 226,421 + H281DRAFT_04797 0.38 -0.9 226,422 - H281DRAFT_04797 0.38 -1.2
Or see this region's nucleotide sequence