Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04469 and H281DRAFT_04470 overlap by 4 nucleotides H281DRAFT_04470 and H281DRAFT_04471 are separated by 29 nucleotides
H281DRAFT_04469: H281DRAFT_04469 - ATP-dependent DNA helicase UvrD, at 194,926 to 197,289
_04469
H281DRAFT_04470: H281DRAFT_04470 - adenosylhomocysteine nucleosidase, at 197,286 to 198,095
_04470
H281DRAFT_04471: H281DRAFT_04471 - propionyl-CoA synthetase, at 198,125 to 200,032
_04471
Position (kb) 197
198
199 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 197.482 kb on + strand, within H281DRAFT_04470 at 197.483 kb on - strand at 197.706 kb on - strand, within H281DRAFT_04470 at 197.975 kb on + strand, within H281DRAFT_04470 at 198.568 kb on - strand, within H281DRAFT_04471 at 198.568 kb on - strand, within H281DRAFT_04471 at 198.607 kb on - strand, within H281DRAFT_04471 at 198.607 kb on - strand, within H281DRAFT_04471 at 198.607 kb on - strand, within H281DRAFT_04471 at 198.607 kb on - strand, within H281DRAFT_04471 at 198.607 kb on - strand, within H281DRAFT_04471 at 198.636 kb on + strand, within H281DRAFT_04471 at 198.636 kb on + strand, within H281DRAFT_04471 at 198.637 kb on - strand at 198.640 kb on + strand at 198.641 kb on - strand, within H281DRAFT_04471 at 198.641 kb on - strand, within H281DRAFT_04471 at 198.646 kb on + strand, within H281DRAFT_04471 at 198.873 kb on + strand, within H281DRAFT_04471 at 198.873 kb on + strand, within H281DRAFT_04471 at 198.873 kb on + strand, within H281DRAFT_04471 at 198.874 kb on - strand, within H281DRAFT_04471
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 197,482 + H281DRAFT_04470 0.24 +0.7 197,483 - -1.3 197,706 - H281DRAFT_04470 0.52 +0.6 197,975 + H281DRAFT_04470 0.85 +1.4 198,568 - H281DRAFT_04471 0.23 -0.9 198,568 - H281DRAFT_04471 0.23 -4.2 198,607 - H281DRAFT_04471 0.25 +0.3 198,607 - H281DRAFT_04471 0.25 +0.1 198,607 - H281DRAFT_04471 0.25 +0.4 198,607 - H281DRAFT_04471 0.25 -0.0 198,607 - H281DRAFT_04471 0.25 -0.1 198,636 + H281DRAFT_04471 0.27 -3.4 198,636 + H281DRAFT_04471 0.27 -1.8 198,637 - -1.3 198,640 + -0.8 198,641 - H281DRAFT_04471 0.27 +0.5 198,641 - H281DRAFT_04471 0.27 -0.0 198,646 + H281DRAFT_04471 0.27 +0.9 198,873 + H281DRAFT_04471 0.39 -0.7 198,873 + H281DRAFT_04471 0.39 -1.5 198,873 + H281DRAFT_04471 0.39 -0.7 198,874 - H281DRAFT_04471 0.39 +0.2
Or see this region's nucleotide sequence