Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_04162 and H281DRAFT_04163 overlap by 4 nucleotides H281DRAFT_04163 and H281DRAFT_04164 overlap by 8 nucleotides H281DRAFT_04164 and H281DRAFT_04165 are separated by 59 nucleotides H281DRAFT_04165 and H281DRAFT_04166 are separated by 65 nucleotides
H281DRAFT_04162: H281DRAFT_04162 - zinc/manganese transport system substrate-binding protein, at 274,515 to 275,456
_04162
H281DRAFT_04163: H281DRAFT_04163 - zinc/manganese transport system ATP-binding protein, at 275,453 to 276,406
_04163
H281DRAFT_04164: H281DRAFT_04164 - zinc/manganese transport system permease protein, at 276,399 to 277,181
_04164
H281DRAFT_04165: H281DRAFT_04165 - S-formylglutathione hydrolase, at 277,241 to 278,092
_04165
H281DRAFT_04166: H281DRAFT_04166 - S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase, at 278,158 to 279,264
_04166
Position (kb) 276
277
278 Strain fitness (log2 ratio) -2
-1
0
1
2 at 275.610 kb on + strand, within H281DRAFT_04163 at 275.667 kb on + strand, within H281DRAFT_04163 at 275.735 kb on + strand, within H281DRAFT_04163 at 275.736 kb on - strand, within H281DRAFT_04163 at 275.737 kb on + strand, within H281DRAFT_04163 at 275.737 kb on + strand, within H281DRAFT_04163 at 275.738 kb on - strand, within H281DRAFT_04163 at 276.135 kb on - strand, within H281DRAFT_04163 at 276.135 kb on - strand, within H281DRAFT_04163 at 276.273 kb on + strand at 276.273 kb on + strand, within H281DRAFT_04163 at 276.391 kb on + strand at 276.391 kb on + strand at 276.392 kb on - strand at 276.408 kb on + strand at 276.742 kb on + strand, within H281DRAFT_04164 at 276.742 kb on + strand, within H281DRAFT_04164 at 276.757 kb on + strand, within H281DRAFT_04164 at 276.806 kb on - strand, within H281DRAFT_04164 at 277.102 kb on - strand, within H281DRAFT_04164 at 277.102 kb on - strand, within H281DRAFT_04164 at 277.153 kb on - strand at 277.153 kb on - strand at 277.195 kb on - strand at 277.195 kb on - strand at 277.195 kb on - strand at 277.232 kb on - strand at 277.302 kb on + strand at 277.302 kb on + strand at 277.302 kb on + strand at 277.303 kb on - strand at 277.305 kb on + strand at 277.305 kb on + strand at 277.305 kb on + strand at 277.306 kb on - strand at 277.486 kb on - strand, within H281DRAFT_04165 at 277.486 kb on - strand, within H281DRAFT_04165 at 277.728 kb on + strand, within H281DRAFT_04165 at 278.041 kb on - strand at 278.082 kb on - strand at 278.082 kb on - strand at 278.082 kb on - strand at 278.107 kb on + strand at 278.108 kb on - strand at 278.108 kb on - strand at 278.160 kb on - strand at 278.162 kb on + strand at 278.163 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 275,610 + H281DRAFT_04163 0.16 -0.3 275,667 + H281DRAFT_04163 0.22 +1.3 275,735 + H281DRAFT_04163 0.30 -1.1 275,736 - H281DRAFT_04163 0.30 +0.4 275,737 + H281DRAFT_04163 0.30 +1.7 275,737 + H281DRAFT_04163 0.30 +1.3 275,738 - H281DRAFT_04163 0.30 +1.1 276,135 - H281DRAFT_04163 0.71 -1.3 276,135 - H281DRAFT_04163 0.71 +1.1 276,273 + +1.9 276,273 + H281DRAFT_04163 0.86 +0.6 276,391 + -0.4 276,391 + -2.1 276,392 - +1.8 276,408 + +0.0 276,742 + H281DRAFT_04164 0.44 +1.8 276,742 + H281DRAFT_04164 0.44 +1.2 276,757 + H281DRAFT_04164 0.46 +0.0 276,806 - H281DRAFT_04164 0.52 +0.4 277,102 - H281DRAFT_04164 0.90 -0.4 277,102 - H281DRAFT_04164 0.90 +0.7 277,153 - +0.7 277,153 - +0.8 277,195 - -0.2 277,195 - +0.1 277,195 - +0.2 277,232 - -1.0 277,302 + -2.0 277,302 + +0.8 277,302 + -0.3 277,303 - +0.7 277,305 + +0.7 277,305 + -1.0 277,305 + -0.5 277,306 - +0.1 277,486 - H281DRAFT_04165 0.29 +1.5 277,486 - H281DRAFT_04165 0.29 -0.5 277,728 + H281DRAFT_04165 0.57 -0.6 278,041 - -1.8 278,082 - -0.0 278,082 - -0.2 278,082 - +1.0 278,107 + -0.1 278,108 - +0.9 278,108 - -0.5 278,160 - +1.2 278,162 + +1.6 278,163 - +0.6
Or see this region's nucleotide sequence