Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03848 and H281DRAFT_03849 are separated by 196 nucleotides H281DRAFT_03849 and H281DRAFT_03850 are separated by 56 nucleotides H281DRAFT_03850 and H281DRAFT_03851 are separated by 107 nucleotides
H281DRAFT_03848: H281DRAFT_03848 - MFS transporter, AAHS family, 4-hydroxybenzoate transporter, at 377,762 to 378,982
_03848
H281DRAFT_03849: H281DRAFT_03849 - protein of unknown function (DUF4863), at 379,179 to 379,730
_03849
H281DRAFT_03850: H281DRAFT_03850 - hypothetical protein, at 379,787 to 380,077
_03850
H281DRAFT_03851: H281DRAFT_03851 - Outer membrane protein (porin), at 380,185 to 381,315
_03851
Position (kb) 379
380 Strain fitness (log2 ratio) -1
0
1
2 at 378.509 kb on - strand, within H281DRAFT_03848 at 378.511 kb on - strand, within H281DRAFT_03848 at 378.549 kb on + strand, within H281DRAFT_03848 at 378.560 kb on + strand, within H281DRAFT_03848 at 378.585 kb on - strand, within H281DRAFT_03848 at 378.746 kb on + strand, within H281DRAFT_03848 at 378.845 kb on - strand, within H281DRAFT_03848 at 379.375 kb on + strand, within H281DRAFT_03849 at 379.390 kb on + strand, within H281DRAFT_03849 at 379.588 kb on + strand, within H281DRAFT_03849 at 380.112 kb on + strand at 380.192 kb on - strand at 380.192 kb on - strand at 380.320 kb on + strand, within H281DRAFT_03851 at 380.321 kb on - strand, within H281DRAFT_03851 at 380.549 kb on - strand, within H281DRAFT_03851 at 380.591 kb on - strand, within H281DRAFT_03851 at 380.617 kb on - strand, within H281DRAFT_03851
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 378,509 - H281DRAFT_03848 0.61 +1.8 378,511 - H281DRAFT_03848 0.61 -0.6 378,549 + H281DRAFT_03848 0.64 +1.9 378,560 + H281DRAFT_03848 0.65 -0.8 378,585 - H281DRAFT_03848 0.67 +0.8 378,746 + H281DRAFT_03848 0.81 +0.4 378,845 - H281DRAFT_03848 0.89 -0.5 379,375 + H281DRAFT_03849 0.36 +0.7 379,390 + H281DRAFT_03849 0.38 +0.8 379,588 + H281DRAFT_03849 0.74 +0.8 380,112 + -0.8 380,192 - -0.1 380,192 - +0.5 380,320 + H281DRAFT_03851 0.12 -0.3 380,321 - H281DRAFT_03851 0.12 +0.5 380,549 - H281DRAFT_03851 0.32 +0.8 380,591 - H281DRAFT_03851 0.36 +0.7 380,617 - H281DRAFT_03851 0.38 +1.2
Or see this region's nucleotide sequence