Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03574 and H281DRAFT_03575 are separated by 85 nucleotides H281DRAFT_03575 and H281DRAFT_03576 are separated by 663 nucleotides
H281DRAFT_03574: H281DRAFT_03574 - transcriptional regulator, AraC family with amidase-like domain, at 82,297 to 83,259
_03574
H281DRAFT_03575: H281DRAFT_03575 - hypothetical protein, at 83,345 to 84,103
_03575
H281DRAFT_03576: H281DRAFT_03576 - two-component system, chemotaxis family, response regulator CheY, at 84,767 to 85,132
_03576
Position (kb) 83
84
85 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 82.610 kb on - strand, within H281DRAFT_03574 at 82.735 kb on + strand, within H281DRAFT_03574 at 82.912 kb on + strand, within H281DRAFT_03574 at 82.992 kb on + strand, within H281DRAFT_03574 at 83.145 kb on - strand, within H281DRAFT_03574 at 83.145 kb on - strand, within H281DRAFT_03574 at 83.310 kb on + strand at 83.452 kb on - strand, within H281DRAFT_03575 at 83.499 kb on + strand, within H281DRAFT_03575 at 83.500 kb on - strand, within H281DRAFT_03575 at 83.808 kb on - strand, within H281DRAFT_03575 at 84.036 kb on - strand at 84.043 kb on + strand at 84.044 kb on - strand at 84.207 kb on - strand at 84.207 kb on - strand at 84.380 kb on + strand at 84.380 kb on + strand at 84.465 kb on + strand at 84.524 kb on + strand at 84.583 kb on - strand at 84.699 kb on - strand at 84.944 kb on - strand, within H281DRAFT_03576 at 85.004 kb on - strand, within H281DRAFT_03576
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 82,610 - H281DRAFT_03574 0.33 +1.3 82,735 + H281DRAFT_03574 0.45 +0.9 82,912 + H281DRAFT_03574 0.64 +1.0 82,992 + H281DRAFT_03574 0.72 +1.6 83,145 - H281DRAFT_03574 0.88 +0.1 83,145 - H281DRAFT_03574 0.88 +0.2 83,310 + +0.8 83,452 - H281DRAFT_03575 0.14 +0.6 83,499 + H281DRAFT_03575 0.20 +0.2 83,500 - H281DRAFT_03575 0.20 +0.2 83,808 - H281DRAFT_03575 0.61 +0.0 84,036 - +0.8 84,043 + -3.1 84,044 - -0.5 84,207 - -1.2 84,207 - -2.1 84,380 + +0.4 84,380 + -1.0 84,465 + +0.5 84,524 + +0.3 84,583 - -2.8 84,699 - +0.1 84,944 - H281DRAFT_03576 0.48 +0.8 85,004 - H281DRAFT_03576 0.65 +0.7
Or see this region's nucleotide sequence