Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03482 and H281DRAFT_03483 are separated by 186 nucleotides H281DRAFT_03483 and H281DRAFT_03484 are separated by 307 nucleotides
H281DRAFT_03482: H281DRAFT_03482 - hypothetical protein, at 565,545 to 567,110
_03482
H281DRAFT_03483: H281DRAFT_03483 - Major Facilitator Superfamily protein, at 567,297 to 568,649
_03483
H281DRAFT_03484: H281DRAFT_03484 - osmoprotectant transport system permease protein, at 568,957 to 569,682
_03484
Position (kb) 567
568
569 Strain fitness (log2 ratio) -1
0
1 at 566.447 kb on - strand, within H281DRAFT_03482 at 566.727 kb on + strand, within H281DRAFT_03482 at 567.091 kb on - strand at 567.230 kb on + strand at 567.276 kb on + strand at 567.554 kb on + strand, within H281DRAFT_03483 at 567.622 kb on - strand at 567.888 kb on + strand, within H281DRAFT_03483 at 568.054 kb on - strand, within H281DRAFT_03483 at 568.054 kb on - strand, within H281DRAFT_03483 at 568.162 kb on - strand, within H281DRAFT_03483 at 568.310 kb on - strand at 568.396 kb on - strand, within H281DRAFT_03483 at 568.900 kb on - strand at 569.021 kb on + strand at 569.119 kb on + strand, within H281DRAFT_03484 at 569.120 kb on - strand, within H281DRAFT_03484 at 569.270 kb on - strand at 569.441 kb on - strand, within H281DRAFT_03484 at 569.442 kb on + strand, within H281DRAFT_03484 at 569.630 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 566,447 - H281DRAFT_03482 0.58 +1.1 566,727 + H281DRAFT_03482 0.75 -1.4 567,091 - +1.0 567,230 + +0.5 567,276 + -0.0 567,554 + H281DRAFT_03483 0.19 +1.7 567,622 - +0.7 567,888 + H281DRAFT_03483 0.44 +0.2 568,054 - H281DRAFT_03483 0.56 +0.4 568,054 - H281DRAFT_03483 0.56 +0.5 568,162 - H281DRAFT_03483 0.64 -0.6 568,310 - -0.9 568,396 - H281DRAFT_03483 0.81 +0.3 568,900 - +0.3 569,021 + -0.2 569,119 + H281DRAFT_03484 0.22 -0.8 569,120 - H281DRAFT_03484 0.22 -0.2 569,270 - +1.0 569,441 - H281DRAFT_03484 0.67 -0.4 569,442 + H281DRAFT_03484 0.67 +0.4 569,630 + +1.1
Or see this region's nucleotide sequence