Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_03217 and H281DRAFT_03218 are separated by 89 nucleotides H281DRAFT_03218 and H281DRAFT_03219 are separated by 224 nucleotides
H281DRAFT_03217: H281DRAFT_03217 - MFS transporter, ACS family, D-galactonate transporter, at 264,401 to 265,768
_03217
H281DRAFT_03218: H281DRAFT_03218 - transcriptional regulator, TetR family, at 265,858 to 266,568
_03218
H281DRAFT_03219: H281DRAFT_03219 - gamma-glutamylputrescine oxidase, at 266,793 to 268,082
_03219
Position (kb) 265
266
267 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 264.884 kb on + strand, within H281DRAFT_03217 at 264.884 kb on + strand, within H281DRAFT_03217 at 264.885 kb on - strand, within H281DRAFT_03217 at 264.902 kb on - strand, within H281DRAFT_03217 at 265.070 kb on + strand, within H281DRAFT_03217 at 265.071 kb on - strand, within H281DRAFT_03217 at 265.845 kb on + strand at 265.847 kb on + strand at 265.847 kb on + strand at 265.848 kb on - strand at 265.965 kb on + strand, within H281DRAFT_03218 at 265.965 kb on + strand, within H281DRAFT_03218 at 266.085 kb on + strand, within H281DRAFT_03218 at 266.085 kb on + strand, within H281DRAFT_03218 at 266.135 kb on + strand, within H281DRAFT_03218 at 266.292 kb on - strand, within H281DRAFT_03218 at 266.339 kb on + strand, within H281DRAFT_03218 at 266.346 kb on - strand, within H281DRAFT_03218 at 266.446 kb on - strand, within H281DRAFT_03218 at 266.536 kb on - strand at 266.600 kb on + strand at 266.653 kb on + strand at 266.746 kb on - strand at 267.070 kb on + strand, within H281DRAFT_03219 at 267.124 kb on + strand, within H281DRAFT_03219 at 267.325 kb on + strand, within H281DRAFT_03219 at 267.325 kb on + strand, within H281DRAFT_03219 at 267.364 kb on + strand, within H281DRAFT_03219
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 264,884 + H281DRAFT_03217 0.35 +0.5 264,884 + H281DRAFT_03217 0.35 -0.3 264,885 - H281DRAFT_03217 0.35 -0.9 264,902 - H281DRAFT_03217 0.37 +0.6 265,070 + H281DRAFT_03217 0.49 -0.2 265,071 - H281DRAFT_03217 0.49 -2.5 265,845 + -0.1 265,847 + +0.8 265,847 + +1.2 265,848 - +0.1 265,965 + H281DRAFT_03218 0.15 -0.1 265,965 + H281DRAFT_03218 0.15 +0.1 266,085 + H281DRAFT_03218 0.32 -0.7 266,085 + H281DRAFT_03218 0.32 -0.3 266,135 + H281DRAFT_03218 0.39 -0.8 266,292 - H281DRAFT_03218 0.61 -0.1 266,339 + H281DRAFT_03218 0.68 +0.0 266,346 - H281DRAFT_03218 0.69 +0.1 266,446 - H281DRAFT_03218 0.83 +0.3 266,536 - -0.8 266,600 + +1.1 266,653 + -0.3 266,746 - -0.4 267,070 + H281DRAFT_03219 0.21 -0.9 267,124 + H281DRAFT_03219 0.26 -1.8 267,325 + H281DRAFT_03219 0.41 +0.4 267,325 + H281DRAFT_03219 0.41 -2.4 267,364 + H281DRAFT_03219 0.44 -2.8
Or see this region's nucleotide sequence