Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02854 and H281DRAFT_02855 are separated by 47 nucleotides H281DRAFT_02855 and H281DRAFT_02856 are separated by 272 nucleotides H281DRAFT_02856 and H281DRAFT_02857 are separated by 212 nucleotides
H281DRAFT_02854: H281DRAFT_02854 - Alkylated DNA repair dioxygenase AlkB, at 448,334 to 448,915
_02854
H281DRAFT_02855: H281DRAFT_02855 - carbonic anhydrase, at 448,963 to 449,640
_02855
H281DRAFT_02856: H281DRAFT_02856 - Protein of unknown function (DUF1488), at 449,913 to 450,185
_02856
H281DRAFT_02857: H281DRAFT_02857 - drug resistance transporter, EmrB/QacA subfamily, at 450,398 to 451,891
_02857
Position (kb) 449
450
451 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 449.187 kb on - strand, within H281DRAFT_02855 at 449.315 kb on - strand, within H281DRAFT_02855 at 449.623 kb on - strand at 449.663 kb on + strand at 449.664 kb on - strand at 449.705 kb on - strand at 449.765 kb on - strand at 449.848 kb on - strand at 449.914 kb on + strand at 449.915 kb on - strand at 449.915 kb on - strand at 450.031 kb on - strand, within H281DRAFT_02856 at 450.185 kb on + strand at 450.186 kb on - strand at 450.293 kb on + strand at 450.536 kb on + strand at 450.536 kb on + strand at 450.537 kb on - strand at 450.537 kb on - strand at 450.538 kb on + strand at 450.538 kb on + strand at 450.539 kb on - strand at 450.539 kb on - strand at 450.546 kb on + strand at 450.547 kb on - strand at 450.611 kb on + strand, within H281DRAFT_02857 at 450.776 kb on + strand, within H281DRAFT_02857 at 450.809 kb on + strand, within H281DRAFT_02857 at 450.810 kb on - strand, within H281DRAFT_02857 at 450.810 kb on - strand, within H281DRAFT_02857 at 450.982 kb on + strand, within H281DRAFT_02857 at 450.983 kb on - strand, within H281DRAFT_02857
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 449,187 - H281DRAFT_02855 0.33 -0.3 449,315 - H281DRAFT_02855 0.52 -0.6 449,623 - -4.6 449,663 + +0.3 449,664 - -0.2 449,705 - -1.0 449,765 - -0.3 449,848 - -0.2 449,914 + -0.1 449,915 - +0.9 449,915 - -0.4 450,031 - H281DRAFT_02856 0.43 +1.2 450,185 + -1.2 450,186 - +1.0 450,293 + -0.5 450,536 + -1.7 450,536 + +0.2 450,537 - -1.6 450,537 - -1.8 450,538 + +0.4 450,538 + -0.5 450,539 - -0.4 450,539 - -0.7 450,546 + -1.1 450,547 - +0.4 450,611 + H281DRAFT_02857 0.14 +0.2 450,776 + H281DRAFT_02857 0.25 +0.2 450,809 + H281DRAFT_02857 0.28 +0.0 450,810 - H281DRAFT_02857 0.28 -1.2 450,810 - H281DRAFT_02857 0.28 +0.3 450,982 + H281DRAFT_02857 0.39 -3.0 450,983 - H281DRAFT_02857 0.39 -0.4
Or see this region's nucleotide sequence