Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_02694 and H281DRAFT_02695 are separated by 20 nucleotides H281DRAFT_02695 and H281DRAFT_02696 are separated by 112 nucleotides H281DRAFT_02696 and H281DRAFT_02697 are separated by 212 nucleotides
H281DRAFT_02694: H281DRAFT_02694 - DNA binding domain-containing protein, excisionase family, at 275,121 to 276,368
_02694
H281DRAFT_02695: H281DRAFT_02695 - transcriptional regulator, HxlR family, at 276,389 to 276,757
_02695
H281DRAFT_02696: H281DRAFT_02696 - glutathione S-transferase, at 276,870 to 277,505
_02696
H281DRAFT_02697: H281DRAFT_02697 - Uncharacterized conserved protein, at 277,718 to 278,089
_02697
Position (kb) 276
277 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 275.795 kb on + strand, within H281DRAFT_02694 at 275.795 kb on + strand, within H281DRAFT_02694 at 275.840 kb on + strand, within H281DRAFT_02694 at 275.932 kb on - strand, within H281DRAFT_02694 at 276.349 kb on + strand at 276.391 kb on - strand at 276.526 kb on - strand, within H281DRAFT_02695 at 276.675 kb on + strand, within H281DRAFT_02695 at 276.856 kb on + strand at 276.879 kb on + strand at 277.021 kb on - strand, within H281DRAFT_02696 at 277.187 kb on + strand, within H281DRAFT_02696 at 277.322 kb on + strand, within H281DRAFT_02696 at 277.323 kb on - strand, within H281DRAFT_02696 at 277.523 kb on - strand at 277.567 kb on + strand at 277.568 kb on - strand at 277.688 kb on + strand at 277.688 kb on + strand at 277.694 kb on + strand at 277.740 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 275,795 + H281DRAFT_02694 0.54 +1.0 275,795 + H281DRAFT_02694 0.54 -0.2 275,840 + H281DRAFT_02694 0.58 -0.2 275,932 - H281DRAFT_02694 0.65 +0.0 276,349 + -0.4 276,391 - +0.5 276,526 - H281DRAFT_02695 0.37 +1.2 276,675 + H281DRAFT_02695 0.78 +0.7 276,856 + +0.3 276,879 + -0.3 277,021 - H281DRAFT_02696 0.24 -0.5 277,187 + H281DRAFT_02696 0.50 -0.2 277,322 + H281DRAFT_02696 0.71 +0.7 277,323 - H281DRAFT_02696 0.71 -0.3 277,523 - -2.6 277,567 + -2.8 277,568 - -1.0 277,688 + -1.5 277,688 + +0.9 277,694 + -0.1 277,740 - +0.7
Or see this region's nucleotide sequence