Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_01462 and H281DRAFT_01463 are separated by 4 nucleotides H281DRAFT_01463 and H281DRAFT_01464 are separated by 77 nucleotides H281DRAFT_01464 and H281DRAFT_01465 overlap by 4 nucleotides H281DRAFT_01465 and H281DRAFT_01466 are separated by 220 nucleotides
H281DRAFT_01462: H281DRAFT_01462 - cyclopropane-fatty-acyl-phospholipid synthase, at 329,183 to 330,316
_01462
H281DRAFT_01463: H281DRAFT_01463 - Steroid 5-alpha reductase family enzyme, at 330,321 to 331,154
_01463
H281DRAFT_01464: H281DRAFT_01464 - Anti-sigma-K factor RskA, at 331,232 to 331,981
_01464
H281DRAFT_01465: H281DRAFT_01465 - RNA polymerase sigma-70 factor, ECF subfamily, at 331,978 to 332,745
_01465
H281DRAFT_01466: H281DRAFT_01466 - Predicted NAD/FAD-binding protein, at 332,966 to 334,267
_01466
Position (kb) 331
332 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 330.241 kb on - strand at 330.307 kb on + strand at 330.424 kb on + strand, within H281DRAFT_01463 at 330.484 kb on - strand, within H281DRAFT_01463 at 331.108 kb on - strand at 331.230 kb on + strand at 331.231 kb on - strand at 331.567 kb on + strand, within H281DRAFT_01464 at 331.569 kb on + strand, within H281DRAFT_01464 at 331.569 kb on + strand, within H281DRAFT_01464 at 331.699 kb on + strand, within H281DRAFT_01464 at 332.032 kb on + strand at 332.032 kb on + strand at 332.033 kb on - strand at 332.075 kb on + strand, within H281DRAFT_01465 at 332.076 kb on - strand, within H281DRAFT_01465 at 332.076 kb on - strand, within H281DRAFT_01465 at 332.079 kb on + strand, within H281DRAFT_01465 at 332.080 kb on - strand, within H281DRAFT_01465 at 332.368 kb on + strand, within H281DRAFT_01465 at 332.368 kb on + strand, within H281DRAFT_01465 at 332.584 kb on - strand at 332.635 kb on + strand, within H281DRAFT_01465 at 332.648 kb on + strand, within H281DRAFT_01465 at 332.649 kb on - strand, within H281DRAFT_01465 at 332.649 kb on - strand, within H281DRAFT_01465 at 332.650 kb on + strand, within H281DRAFT_01465 at 332.651 kb on - strand, within H281DRAFT_01465 at 332.779 kb on + strand at 332.783 kb on + strand at 332.783 kb on + strand at 332.784 kb on - strand at 332.922 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 330,241 - -2.8 330,307 + +0.5 330,424 + H281DRAFT_01463 0.12 +0.6 330,484 - H281DRAFT_01463 0.20 -1.8 331,108 - +0.2 331,230 + +1.3 331,231 - -3.3 331,567 + H281DRAFT_01464 0.45 +0.6 331,569 + H281DRAFT_01464 0.45 +1.9 331,569 + H281DRAFT_01464 0.45 +1.0 331,699 + H281DRAFT_01464 0.62 -0.1 332,032 + -0.8 332,032 + -0.2 332,033 - +1.4 332,075 + H281DRAFT_01465 0.13 -3.7 332,076 - H281DRAFT_01465 0.13 -0.2 332,076 - H281DRAFT_01465 0.13 -3.2 332,079 + H281DRAFT_01465 0.13 -2.9 332,080 - H281DRAFT_01465 0.13 -0.5 332,368 + H281DRAFT_01465 0.51 -1.2 332,368 + H281DRAFT_01465 0.51 -0.5 332,584 - +2.5 332,635 + H281DRAFT_01465 0.86 -0.3 332,648 + H281DRAFT_01465 0.87 +0.3 332,649 - H281DRAFT_01465 0.87 -0.3 332,649 - H281DRAFT_01465 0.87 -0.6 332,650 + H281DRAFT_01465 0.88 -0.9 332,651 - H281DRAFT_01465 0.88 +0.2 332,779 + +0.6 332,783 + +0.1 332,783 + -0.1 332,784 - +0.7 332,922 - +1.5
Or see this region's nucleotide sequence