Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00918 and H281DRAFT_00919 are separated by 139 nucleotides H281DRAFT_00919 and H281DRAFT_00920 are separated by 214 nucleotides H281DRAFT_00920 and H281DRAFT_00921 are separated by 228 nucleotides H281DRAFT_00921 and H281DRAFT_00922 are separated by 138 nucleotides
H281DRAFT_00918: H281DRAFT_00918 - Conserved secreted protein, at 1,022,231 to 1,022,746
_00918
H281DRAFT_00919: H281DRAFT_00919 - hypothetical protein, at 1,022,886 to 1,023,242
_00919
H281DRAFT_00920: H281DRAFT_00920 - transcriptional regulator, GntR family, at 1,023,457 to 1,024,980
_00920
H281DRAFT_00921: H281DRAFT_00921 - uncharacterized domain 1-containing protein, at 1,025,209 to 1,025,694
_00921
H281DRAFT_00922: H281DRAFT_00922 - hypothetical protein, at 1,025,833 to 1,026,831
_00922
Position (kb)
1023
1024
1025 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1022.674 kb on + strand at 1022.675 kb on - strand, within H281DRAFT_00918 at 1022.784 kb on + strand at 1022.785 kb on - strand at 1022.858 kb on + strand at 1022.859 kb on - strand at 1022.865 kb on - strand at 1022.887 kb on + strand at 1022.888 kb on - strand at 1022.888 kb on - strand at 1023.021 kb on - strand, within H281DRAFT_00919 at 1023.280 kb on + strand at 1023.313 kb on + strand at 1023.357 kb on + strand at 1023.383 kb on - strand at 1023.437 kb on - strand at 1023.437 kb on - strand at 1023.560 kb on - strand at 1023.841 kb on + strand, within H281DRAFT_00920 at 1023.841 kb on + strand, within H281DRAFT_00920 at 1023.841 kb on + strand, within H281DRAFT_00920 at 1023.842 kb on - strand, within H281DRAFT_00920 at 1024.627 kb on + strand, within H281DRAFT_00920 at 1024.743 kb on + strand, within H281DRAFT_00920 at 1025.095 kb on - strand at 1025.101 kb on + strand at 1025.343 kb on + strand, within H281DRAFT_00921 at 1025.343 kb on + strand, within H281DRAFT_00921 at 1025.344 kb on - strand, within H281DRAFT_00921 at 1025.344 kb on - strand, within H281DRAFT_00921 at 1025.375 kb on + strand, within H281DRAFT_00921 at 1025.605 kb on + strand, within H281DRAFT_00921 at 1025.682 kb on + strand at 1025.759 kb on + strand at 1025.819 kb on - strand at 1025.956 kb on - strand, within H281DRAFT_00922 at 1025.962 kb on + strand, within H281DRAFT_00922 at 1025.963 kb on - strand, within H281DRAFT_00922 at 1025.963 kb on - strand, within H281DRAFT_00922 at 1025.980 kb on + strand, within H281DRAFT_00922
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 1,022,674 + +2.3 1,022,675 - H281DRAFT_00918 0.86 +0.0 1,022,784 + +0.2 1,022,785 - -0.1 1,022,858 + -0.5 1,022,859 - -0.1 1,022,865 - +1.2 1,022,887 + -1.1 1,022,888 - -0.7 1,022,888 - -0.4 1,023,021 - H281DRAFT_00919 0.38 +0.6 1,023,280 + -1.1 1,023,313 + -0.3 1,023,357 + -0.1 1,023,383 - +0.9 1,023,437 - +0.1 1,023,437 - -0.2 1,023,560 - +0.1 1,023,841 + H281DRAFT_00920 0.25 +0.6 1,023,841 + H281DRAFT_00920 0.25 +0.2 1,023,841 + H281DRAFT_00920 0.25 +1.6 1,023,842 - H281DRAFT_00920 0.25 -0.8 1,024,627 + H281DRAFT_00920 0.77 +0.9 1,024,743 + H281DRAFT_00920 0.84 +1.8 1,025,095 - +0.7 1,025,101 + -1.3 1,025,343 + H281DRAFT_00921 0.28 +0.1 1,025,343 + H281DRAFT_00921 0.28 -1.8 1,025,344 - H281DRAFT_00921 0.28 +1.0 1,025,344 - H281DRAFT_00921 0.28 +0.3 1,025,375 + H281DRAFT_00921 0.34 -0.5 1,025,605 + H281DRAFT_00921 0.81 +0.2 1,025,682 + +0.8 1,025,759 + +1.0 1,025,819 - -0.8 1,025,956 - H281DRAFT_00922 0.12 -0.2 1,025,962 + H281DRAFT_00922 0.13 -0.3 1,025,963 - H281DRAFT_00922 0.13 -0.1 1,025,963 - H281DRAFT_00922 0.13 +0.4 1,025,980 + H281DRAFT_00922 0.15 -0.8
Or see this region's nucleotide sequence