Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00388 and H281DRAFT_00389 are separated by 21 nucleotides H281DRAFT_00389 and H281DRAFT_00390 are separated by 343 nucleotides H281DRAFT_00390 and H281DRAFT_00391 are separated by 496 nucleotides
H281DRAFT_00388: H281DRAFT_00388 - Protein of unknown function (DUF3443), at 429,760 to 431,283
_00388
H281DRAFT_00389: H281DRAFT_00389 - Protein of unknown function (DUF2844), at 431,305 to 431,766
_00389
H281DRAFT_00390: H281DRAFT_00390 - Beta-barrel assembly machine subunit BamC, at 432,110 to 433,342
_00390
H281DRAFT_00391: H281DRAFT_00391 - Threonine/homoserine efflux transporter RhtA, at 433,839 to 434,807
_00391
Position (kb) 432
433
434 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 431.267 kb on - strand at 431.311 kb on + strand at 431.311 kb on + strand at 431.311 kb on + strand at 431.312 kb on - strand at 431.312 kb on - strand at 431.468 kb on + strand, within H281DRAFT_00389 at 431.468 kb on + strand, within H281DRAFT_00389 at 431.480 kb on + strand, within H281DRAFT_00389 at 431.529 kb on + strand, within H281DRAFT_00389 at 431.531 kb on + strand, within H281DRAFT_00389 at 431.532 kb on - strand, within H281DRAFT_00389 at 431.599 kb on - strand, within H281DRAFT_00389 at 431.599 kb on - strand, within H281DRAFT_00389 at 431.599 kb on - strand, within H281DRAFT_00389 at 431.599 kb on - strand at 431.737 kb on - strand at 431.821 kb on - strand at 431.983 kb on - strand at 431.983 kb on - strand at 433.031 kb on + strand, within H281DRAFT_00390 at 433.179 kb on + strand, within H281DRAFT_00390 at 433.739 kb on + strand at 433.739 kb on + strand at 433.740 kb on - strand at 433.740 kb on - strand at 434.060 kb on + strand, within H281DRAFT_00391 at 434.060 kb on + strand, within H281DRAFT_00391 at 434.060 kb on + strand, within H281DRAFT_00391 at 434.060 kb on + strand, within H281DRAFT_00391 at 434.061 kb on - strand, within H281DRAFT_00391 at 434.062 kb on + strand, within H281DRAFT_00391 at 434.063 kb on - strand, within H281DRAFT_00391 at 434.063 kb on - strand, within H281DRAFT_00391 at 434.063 kb on - strand, within H281DRAFT_00391 at 434.082 kb on + strand, within H281DRAFT_00391 at 434.237 kb on - strand, within H281DRAFT_00391
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 431,267 - +0.6 431,311 + -0.5 431,311 + +0.2 431,311 + +1.2 431,312 - +0.3 431,312 - -1.6 431,468 + H281DRAFT_00389 0.35 +1.7 431,468 + H281DRAFT_00389 0.35 +0.4 431,480 + H281DRAFT_00389 0.38 -2.2 431,529 + H281DRAFT_00389 0.48 -0.6 431,531 + H281DRAFT_00389 0.49 +0.7 431,532 - H281DRAFT_00389 0.49 -3.4 431,599 - H281DRAFT_00389 0.64 +0.8 431,599 - H281DRAFT_00389 0.64 -0.4 431,599 - H281DRAFT_00389 0.64 +0.3 431,599 - +0.4 431,737 - -2.7 431,821 - -1.4 431,983 - -0.5 431,983 - -1.0 433,031 + H281DRAFT_00390 0.75 +1.3 433,179 + H281DRAFT_00390 0.87 +0.5 433,739 + +0.0 433,739 + +1.2 433,740 - -0.5 433,740 - +0.1 434,060 + H281DRAFT_00391 0.23 -0.5 434,060 + H281DRAFT_00391 0.23 -0.5 434,060 + H281DRAFT_00391 0.23 -0.7 434,060 + H281DRAFT_00391 0.23 -2.3 434,061 - H281DRAFT_00391 0.23 +0.2 434,062 + H281DRAFT_00391 0.23 -0.9 434,063 - H281DRAFT_00391 0.23 +0.8 434,063 - H281DRAFT_00391 0.23 +0.4 434,063 - H281DRAFT_00391 0.23 -0.0 434,082 + H281DRAFT_00391 0.25 +0.2 434,237 - H281DRAFT_00391 0.41 -0.9
Or see this region's nucleotide sequence