Experiment: Malonic (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt H281DRAFT_00271 and H281DRAFT_00272 are separated by 75 nucleotides H281DRAFT_00272 and H281DRAFT_00273 are separated by 455 nucleotides
H281DRAFT_00271: H281DRAFT_00271 - 2-aminoadipate transaminase, at 289,078 to 290,274
_00271
H281DRAFT_00272: H281DRAFT_00272 - Glyoxalase-like domain-containing protein, at 290,350 to 291,054
_00272
H281DRAFT_00273: H281DRAFT_00273 - DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain, at 291,510 to 292,961
_00273
Position (kb) 290
291
292 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 289.496 kb on + strand, within H281DRAFT_00271 at 289.523 kb on + strand, within H281DRAFT_00271 at 289.524 kb on - strand, within H281DRAFT_00271 at 289.524 kb on - strand, within H281DRAFT_00271 at 289.626 kb on - strand, within H281DRAFT_00271 at 289.755 kb on - strand, within H281DRAFT_00271 at 289.835 kb on + strand, within H281DRAFT_00271 at 289.847 kb on + strand, within H281DRAFT_00271 at 289.847 kb on + strand at 289.877 kb on + strand, within H281DRAFT_00271 at 289.878 kb on - strand, within H281DRAFT_00271 at 290.040 kb on - strand, within H281DRAFT_00271 at 290.290 kb on + strand at 290.291 kb on - strand at 290.355 kb on + strand at 290.355 kb on + strand at 290.355 kb on + strand at 290.356 kb on - strand at 290.356 kb on - strand at 290.456 kb on - strand, within H281DRAFT_00272 at 290.763 kb on - strand, within H281DRAFT_00272 at 290.984 kb on + strand at 290.985 kb on - strand at 291.109 kb on + strand at 291.110 kb on - strand at 291.129 kb on + strand at 291.129 kb on + strand at 291.129 kb on + strand at 291.129 kb on + strand at 291.129 kb on + strand at 291.130 kb on - strand at 291.130 kb on - strand at 291.130 kb on - strand at 291.130 kb on - strand at 291.130 kb on - strand at 291.135 kb on + strand at 291.136 kb on - strand at 291.510 kb on - strand at 291.524 kb on + strand at 291.633 kb on - strand at 291.633 kb on - strand at 291.897 kb on + strand, within H281DRAFT_00273
Per-strain Table
Position Strand Gene LocusTag Fraction Malonic (C) remove 289,496 + H281DRAFT_00271 0.35 -1.2 289,523 + H281DRAFT_00271 0.37 +0.4 289,524 - H281DRAFT_00271 0.37 +0.3 289,524 - H281DRAFT_00271 0.37 +0.7 289,626 - H281DRAFT_00271 0.46 -0.9 289,755 - H281DRAFT_00271 0.57 -0.8 289,835 + H281DRAFT_00271 0.63 +0.2 289,847 + H281DRAFT_00271 0.64 +0.1 289,847 + -1.7 289,877 + H281DRAFT_00271 0.67 +0.5 289,878 - H281DRAFT_00271 0.67 -0.8 290,040 - H281DRAFT_00271 0.80 -0.2 290,290 + -0.5 290,291 - +1.3 290,355 + -0.2 290,355 + +1.6 290,355 + +0.3 290,356 - +0.3 290,356 - -3.7 290,456 - H281DRAFT_00272 0.15 +0.6 290,763 - H281DRAFT_00272 0.59 +0.8 290,984 + +0.4 290,985 - +0.8 291,109 + +0.9 291,110 - +0.9 291,129 + +0.4 291,129 + +0.6 291,129 + +1.9 291,129 + -1.9 291,129 + +0.4 291,130 - +0.3 291,130 - +1.0 291,130 - +2.5 291,130 - -1.4 291,130 - -2.4 291,135 + +1.6 291,136 - -0.5 291,510 - -1.3 291,524 + -0.6 291,633 - +1.2 291,633 - +0.5 291,897 + H281DRAFT_00273 0.27 +0.5
Or see this region's nucleotide sequence