Strain Fitness in Caulobacter crescentus NA1000 around CCNA_03241

Experiment: PYE 0.5x 30C survival rep3 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep3 28 days
3,404,742	+		CCNA_03240	0.28	-0.1
3,404,744	+		CCNA_03240	0.28	+0.6
3,404,861	+		CCNA_03240	0.36	-2.6
3,404,871	+		CCNA_03240	0.37	-0.6
3,404,871	+		CCNA_03240	0.37	-0.9
3,404,872	+		CCNA_03240	0.37	-0.4
3,404,879	-		CCNA_03240	0.38	-0.8
3,404,974	-		CCNA_03240	0.44	-2.1
3,404,974	-		CCNA_03240	0.44	+0.0
3,405,009	+		CCNA_03240	0.47	-1.4
3,405,017	-		CCNA_03240	0.48	-0.6
3,405,017	-		CCNA_03240	0.48	+1.2
3,405,037	-		CCNA_03240	0.49	-1.1
3,405,065	+		CCNA_03240	0.51	-0.4
3,405,103	-		CCNA_03240	0.54	-1.3
3,405,103	-		CCNA_03240	0.54	+1.7
3,405,194	+		CCNA_03240	0.60	-0.6
3,405,204	+		CCNA_03240	0.61	-1.9
3,405,206	+		CCNA_03240	0.61	-1.6
3,405,219	-		CCNA_03240	0.62	+1.2
3,405,221	-		CCNA_03240	0.62	-0.2
3,405,304	-		CCNA_03240	0.68	-1.0
3,405,304	-		CCNA_03240	0.68	+0.2
3,405,336	-		CCNA_03240	0.71	-3.8
3,405,352	+		CCNA_03240	0.72	-1.8
3,405,360	-		CCNA_03240	0.72	-2.7
3,405,408	-		CCNA_03240	0.76	-0.8
3,405,422	+		CCNA_03240	0.77	-0.8
3,405,422	+		CCNA_03240	0.77	+1.2
3,405,429	-		CCNA_03240	0.77	+1.2
3,405,430	-		CCNA_03240	0.77	-0.6
3,405,430	-		CCNA_03240	0.77	+3.2
3,405,456	+		CCNA_03240	0.79	+0.6
3,405,462	+		CCNA_03240	0.80	-2.8
3,405,463	+		CCNA_03240	0.80	+0.6
3,405,471	-		CCNA_03240	0.80	-1.3
3,405,472	+		CCNA_03240	0.80	+0.3
3,405,520	-		CCNA_03240	0.84	-0.2
3,405,520	-		CCNA_03240	0.84	-1.3
3,405,525	-		CCNA_03240	0.84	-1.0
3,405,525	-		CCNA_03240	0.84	-0.7
3,405,525	-		CCNA_03240	0.84	-2.1
3,405,530	-		CCNA_03240	0.85	-1.7
3,405,536	-		CCNA_03240	0.85	-0.8
3,405,536	-		CCNA_03240	0.85	-1.1
3,405,572	-		CCNA_03240	0.88	+0.1
3,405,577	-		CCNA_03240	0.88	-1.0
3,405,583	-		CCNA_03240	0.89	-0.0
3,405,602	+		CCNA_03240	0.90	-0.8
3,405,611	-				-0.1
3,405,639	+				-1.0
3,405,664	-				-0.2
3,405,772	+				+1.1
3,405,821	+				-0.1
3,405,829	-				+1.0
3,405,829	-				+2.8
3,405,829	-				+0.7
3,405,839	-				+1.0
3,405,846	-				+4.5
3,405,852	+				+0.6
3,405,897	-		CCNA_03241	0.11	-1.6
3,405,951	-		CCNA_03241	0.15	-0.2
3,405,953	+		CCNA_03241	0.15	+0.6
3,405,956	-		CCNA_03241	0.16	+1.6
3,405,982	+		CCNA_03241	0.17	+1.2
3,405,982	+		CCNA_03241	0.17	+2.2
3,405,982	+		CCNA_03241	0.17	-2.1
3,405,982	+		CCNA_03241	0.17	+2.2
3,405,990	-		CCNA_03241	0.18	-1.8
3,405,990	-		CCNA_03241	0.18	+1.2
3,405,990	-		CCNA_03241	0.18	+0.8
3,405,990	-		CCNA_03241	0.18	-0.1
3,406,034	+		CCNA_03241	0.21	-0.4
3,406,080	-		CCNA_03241	0.24	-1.9
3,406,086	-		CCNA_03241	0.25	+1.8
3,406,124	+		CCNA_03241	0.28	+0.6
3,406,138	-		CCNA_03241	0.29	-1.7
3,406,151	+		CCNA_03241	0.29	-1.3
3,406,151	+		CCNA_03241	0.29	+1.2
3,406,151	+		CCNA_03241	0.29	-0.7
3,406,151	+		CCNA_03241	0.29	+0.0
3,406,159	-		CCNA_03241	0.30	-1.8
3,406,159	-		CCNA_03241	0.30	-1.2
3,406,159	-		CCNA_03241	0.30	-0.5
3,406,159	-		CCNA_03241	0.30	+0.0
3,406,159	-		CCNA_03241	0.30	-0.1
3,406,164	-		CCNA_03241	0.30	-0.4
3,406,170	-		CCNA_03241	0.31	+2.2
3,406,172	+		CCNA_03241	0.31	-0.5
3,406,192	-		CCNA_03241	0.32	+5.0
3,406,218	-		CCNA_03241	0.34	-1.0
3,406,218	-		CCNA_03241	0.34	+0.1
3,406,220	+		CCNA_03241	0.34	-1.3
3,406,256	-		CCNA_03241	0.37	+0.6
3,406,262	+		CCNA_03241	0.37	-2.7
3,406,268	+		CCNA_03241	0.38	-1.7
3,406,323	-		CCNA_03241	0.42	+0.8
3,406,328	-		CCNA_03241	0.42	+1.5
3,406,337	+		CCNA_03241	0.43	+0.6
3,406,340	-		CCNA_03241	0.43	-0.4
3,406,381	-		CCNA_03241	0.46	+0.7
3,406,381	-		CCNA_03241	0.46	-0.6
3,406,436	-		CCNA_03241	0.50	+0.2
3,406,517	+		CCNA_03241	0.56	-1.7
3,406,526	-				+0.4
3,406,601	+		CCNA_03241	0.62	-2.4
3,406,643	-		CCNA_03241	0.65	-0.5
3,406,643	-		CCNA_03241	0.65	-0.1
3,406,656	+		CCNA_03241	0.66	-2.0
3,406,664	-		CCNA_03241	0.66	+0.1
3,406,669	+		CCNA_03241	0.66	-1.8
3,406,712	+		CCNA_03241	0.70	-1.0
3,406,721	-		CCNA_03241	0.70	-2.9
3,406,726	+		CCNA_03241	0.71	-0.9
3,406,756	+		CCNA_03241	0.73	-1.6
3,406,756	-		CCNA_03241	0.73	+0.3
3,406,775	-		CCNA_03241	0.74	-0.2
3,406,783	+		CCNA_03241	0.75	-2.8
3,406,794	+		CCNA_03241	0.75	-1.8
3,406,836	-		CCNA_03241	0.78	+0.5
3,406,875	-		CCNA_03241	0.81	-0.7
3,406,901	-		CCNA_03241	0.83	+0.2
3,406,903	-		CCNA_03241	0.83	-0.2
3,406,908	+		CCNA_03241	0.84	+2.2
3,406,936	-		CCNA_03241	0.86	-2.3
3,406,954	-		CCNA_03241	0.87	-0.4
3,406,954	-		CCNA_03241	0.87	+0.6
3,406,983	+		CCNA_03241	0.89	+1.2
3,406,993	+		CCNA_03241	0.90	-1.4
3,407,001	-				+1.2
3,407,026	+				+2.9
3,407,034	-				+1.7
3,407,068	+				-2.4
3,407,088	+				-0.4
3,407,097	+				-2.8
3,407,097	+				-0.5
3,407,152	+				-0.8
3,407,167	+				+2.2
3,407,167	+				-1.1
3,407,167	+				-0.3
3,407,167	+				-0.8
3,407,170	-				+0.2
3,407,172	+				-0.8
3,407,175	-				+0.6
3,407,177	+				-1.0
3,407,177	+				-1.6
3,407,177	+				-2.2
3,407,185	-				+1.1
3,407,185	-				-1.1
3,407,185	-				+0.4
3,407,185	-				-0.1
3,407,185	-				-0.1
3,407,207	+				+1.1
3,407,218	+				+0.6
3,407,241	+				-0.3
3,407,247	-				-0.2
3,407,247	-				+0.5
3,407,247	-				+1.2
3,407,253	+				+1.2
3,407,255	+				-0.4
3,407,261	-				+0.6
3,407,263	+				-0.5
3,407,267	+				-0.1
3,407,339	-				+0.6
3,407,346	+				+2.2
3,407,349	-				+0.2
3,407,353	+				-1.7
3,407,361	-				+0.6
3,407,361	-				-0.0
3,407,361	-				+0.6
3,407,389	+				-1.1
3,407,389	+				-0.4
3,407,392	-				-1.7
3,407,404	+				-1.6
3,407,420	+		CCNA_03242	0.11	+1.2
3,407,428	-		CCNA_03242	0.11	-0.8
3,407,506	-		CCNA_03242	0.16	-0.8
3,407,506	-		CCNA_03242	0.16	+0.8
3,407,511	-		CCNA_03242	0.17	-0.5
3,407,536	-		CCNA_03242	0.19	+0.3
3,407,592	+		CCNA_03242	0.22	-0.1
3,407,597	+		CCNA_03242	0.23	-1.9
3,407,605	-		CCNA_03242	0.23	+0.5
3,407,605	-				+0.6
3,407,610	-		CCNA_03242	0.24	+0.6
3,407,639	+		CCNA_03242	0.26	+0.9
3,407,664	+		CCNA_03242	0.27	+0.6
3,407,664	-		CCNA_03242	0.27	+0.3
3,407,669	+		CCNA_03242	0.28	+0.6
3,407,682	-		CCNA_03242	0.29	-0.2
3,407,692	+		CCNA_03242	0.29	+0.1
3,407,695	-		CCNA_03242	0.29	+0.2
3,407,700	-		CCNA_03242	0.30	+0.6
3,407,707	-		CCNA_03242	0.30	+0.5
3,407,740	+		CCNA_03242	0.33	-3.3
3,407,748	-		CCNA_03242	0.33	+0.3
3,407,758	-		CCNA_03242	0.34	+2.2
3,407,773	+		CCNA_03242	0.35	-2.0
3,407,820	-		CCNA_03242	0.38	-1.3
3,407,830	-		CCNA_03242	0.39	+1.8
3,407,835	-		CCNA_03242	0.39	+0.5
3,407,863	-		CCNA_03242	0.41	+0.4
3,407,863	-		CCNA_03242	0.41	-1.7
3,407,868	-		CCNA_03242	0.41	-0.8
3,407,924	-		CCNA_03242	0.45	+0.4
3,407,966	-		CCNA_03242	0.48	-0.6
3,407,977	-		CCNA_03242	0.49	+0.2
3,407,982	+		CCNA_03242	0.49	-0.9
3,407,990	-		CCNA_03242	0.50	-0.1
3,408,026	-		CCNA_03242	0.52	+0.7
3,408,026	-		CCNA_03242	0.52	-0.0
3,408,029	+		CCNA_03242	0.52	-2.5
3,408,069	-		CCNA_03242	0.55	+1.9
3,408,069	-		CCNA_03242	0.55	+0.9
3,408,087	+		CCNA_03242	0.56	+0.0