Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02982

Experiment: PYE 0.5x 30C survival rep3 28 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE 0.5x 30C survival rep3 28 days
3,136,112	+		CCNA_02980	0.67	+2.4
3,136,120	-		CCNA_02980	0.68	-0.0
3,136,141	-		CCNA_02980	0.71	+0.4
3,136,170	+		CCNA_02980	0.74	-0.5
3,136,171	-		CCNA_02980	0.74	+1.1
3,136,178	-		CCNA_02980	0.75	+1.1
3,136,207	+		CCNA_02980	0.79	-1.7
3,136,213	+		CCNA_02980	0.80	+0.3
3,136,221	-		CCNA_02980	0.81	+0.6
3,136,248	-		CCNA_02980	0.84	+1.0
3,136,252	+		CCNA_02980	0.85	-1.9
3,136,253	-		CCNA_02980	0.85	+0.7
3,136,262	+		CCNA_02980	0.86	-1.7
3,136,277	+		CCNA_02980	0.88	+0.8
3,136,283	-		CCNA_02980	0.89	+2.7
3,136,285	-		CCNA_02980	0.89	+1.0
3,136,285	-		CCNA_02980	0.89	+0.8
3,136,317	+				+1.4
3,136,318	-				+0.6
3,136,325	-				+0.5
3,136,335	+				+2.4
3,136,361	+				+2.4
3,136,363	-				-0.1
3,136,363	-				+0.9
3,136,379	+				-1.0
3,136,387	-				-2.6
3,136,387	-				-1.8
3,136,387	-				+1.7
3,136,387	-				+1.0
3,136,406	+				-1.7
3,136,414	-				-3.0
3,136,414	-				+0.7
3,136,435	+				-0.2
3,136,583	+		CCNA_02981	0.23	-0.2
3,136,611	-		CCNA_02981	0.29	-1.1
3,136,661	+		CCNA_02981	0.40	-0.8
3,136,661	+		CCNA_02981	0.40	+0.5
3,136,661	+		CCNA_02981	0.40	-1.2
3,136,669	-		CCNA_02981	0.42	-0.3
3,136,669	-		CCNA_02981	0.42	-0.9
3,136,683	+		CCNA_02981	0.45	+0.9
3,136,683	+		CCNA_02981	0.45	+0.2
3,136,683	+		CCNA_02981	0.45	-0.5
3,136,691	-		CCNA_02981	0.47	-0.5
3,136,691	-		CCNA_02981	0.47	+0.1
3,136,718	+		CCNA_02981	0.53	-0.9
3,136,724	-		CCNA_02981	0.54	+2.4
3,136,731	+		CCNA_02981	0.56	+0.4
3,136,850	-		CCNA_02981	0.81	-2.8
3,136,868	+		CCNA_02981	0.85	-2.2
3,136,868	+		CCNA_02981	0.85	-0.7
3,136,868	+		CCNA_02981	0.85	+0.4
3,136,876	-		CCNA_02981	0.87	+1.1
3,136,888	+		CCNA_02981	0.90	+0.1
3,136,888	+		CCNA_02981	0.90	-0.2
3,136,896	-				-0.0
3,136,901	+				+0.5
3,136,929	-				-0.2
3,136,955	+				+0.1
3,136,960	+				-0.4
3,137,010	-				-1.9
3,137,058	+				-2.7
3,137,059	+				-1.9
3,137,069	-				+0.4
3,137,074	-				-0.8
3,137,085	+				+0.0
3,137,095	+				+1.3
3,137,096	+				+0.0
3,137,103	-				+0.1
3,137,148	+				+2.1
3,137,189	+				-0.0
3,137,206	+				+0.5
3,137,206	-				+2.4
3,137,226	+				+2.6
3,137,319	+		CCNA_02982	0.18	-2.5
3,137,319	+		CCNA_02982	0.18	-1.7
3,137,319	+		CCNA_02982	0.18	-0.9
3,137,319	+		CCNA_02982	0.18	-0.2
3,137,319	+		CCNA_02982	0.18	+2.4
3,137,319	+		CCNA_02982	0.18	+3.5
3,137,319	+		CCNA_02982	0.18	+2.4
3,137,319	+				-0.9
3,137,319	+				+0.5
3,137,327	-		CCNA_02982	0.18	+1.9
3,137,327	-		CCNA_02982	0.18	-2.4
3,137,327	-		CCNA_02982	0.18	-0.8
3,137,327	-		CCNA_02982	0.18	-0.6
3,137,327	-		CCNA_02982	0.18	+0.1
3,137,327	-		CCNA_02982	0.18	+1.0
3,137,327	-		CCNA_02982	0.18	+1.4
3,137,327	-		CCNA_02982	0.18	-0.9
3,137,355	+		CCNA_02982	0.21	-1.7
3,137,355	+		CCNA_02982	0.21	-2.1
3,137,355	+		CCNA_02982	0.21	-2.7
3,137,355	+		CCNA_02982	0.21	+0.4
3,137,363	-		CCNA_02982	0.21	-1.9
3,137,368	-		CCNA_02982	0.22	-0.2
3,137,386	-		CCNA_02982	0.23	-1.4
3,137,418	+		CCNA_02982	0.26	+0.8
3,137,424	+		CCNA_02982	0.27	-0.4
3,137,425	+		CCNA_02982	0.27	-2.3
3,137,437	+		CCNA_02982	0.28	-1.6
3,137,448	+		CCNA_02982	0.29	-0.6
3,137,453	+		CCNA_02982	0.29	+0.5
3,137,455	-		CCNA_02982	0.29	-0.7
3,137,460	+		CCNA_02982	0.30	-2.7
3,137,481	+		CCNA_02982	0.31	-2.3
3,137,486	+		CCNA_02982	0.32	-0.2
3,137,487	+		CCNA_02982	0.32	+1.9
3,137,493	+		CCNA_02982	0.32	+2.4
3,137,496	-		CCNA_02982	0.33	+0.7
3,137,532	+		CCNA_02982	0.36	-0.6
3,137,547	+		CCNA_02982	0.37	-1.1
3,137,586	-		CCNA_02982	0.40	+0.2
3,137,626	+		CCNA_02982	0.44	+1.4
3,137,626	+		CCNA_02982	0.44	-2.7
3,137,643	+		CCNA_02982	0.45	+0.3
3,137,648	+		CCNA_02982	0.46	+0.2
3,137,671	+		CCNA_02982	0.48	-0.2
3,137,671	+		CCNA_02982	0.48	+1.1
3,137,676	+		CCNA_02982	0.48	-0.9
3,137,679	-		CCNA_02982	0.48	-1.3
3,137,679	-		CCNA_02982	0.48	+2.4
3,137,690	+		CCNA_02982	0.49	+1.0
3,137,690	+		CCNA_02982	0.49	+0.1
3,137,693	-		CCNA_02982	0.50	+3.1
3,137,718	+		CCNA_02982	0.52	-2.2
3,137,740	+		CCNA_02982	0.54	-0.2
3,137,785	+		CCNA_02982	0.57	-0.2
3,137,816	-		CCNA_02982	0.60	+2.4
3,137,821	-		CCNA_02982	0.60	-0.1
3,137,821	-		CCNA_02982	0.60	+1.1
3,137,863	+				-1.3
3,137,866	-		CCNA_02982	0.64	+1.8
3,137,890	+		CCNA_02982	0.66	-0.9
3,137,890	+		CCNA_02982	0.66	-1.5
3,137,920	-		CCNA_02982	0.69	-1.2
3,137,957	-		CCNA_02982	0.72	-0.7
3,137,979	+		CCNA_02982	0.74	+0.7
3,138,060	-		CCNA_02982	0.81	-2.3
3,138,101	+		CCNA_02982	0.84	+1.9
3,138,102	+		CCNA_02982	0.84	+0.4
3,138,109	-		CCNA_02982	0.85	-0.5
3,138,120	+		CCNA_02982	0.86	+1.3
3,138,120	+		CCNA_02982	0.86	-1.7
3,138,120	+		CCNA_02982	0.86	-1.9
3,138,120	+		CCNA_02982	0.86	+3.0
3,138,120	+		CCNA_02982	0.86	+0.9
3,138,128	-		CCNA_02982	0.87	+0.5
3,138,128	-		CCNA_02982	0.87	-0.6
3,138,128	-		CCNA_02982	0.87	-0.1
3,138,128	-		CCNA_02982	0.87	+1.6
3,138,165	+		CCNA_02982	0.90	+0.1
3,138,180	-				-1.0
3,138,195	-				-0.6
3,138,198	+				-0.2
3,138,201	-				-0.5
3,138,230	-				-1.3
3,138,266	+				+0.8
3,138,274	-				-0.9
3,138,277	+				+0.8
3,138,285	-				-2.0
3,138,290	+				+1.9
3,138,321	-				-1.1
3,138,363	+				-0.2
3,138,387	+				+0.3
3,138,387	+				-0.7
3,138,388	+				+0.7
3,138,390	-				-0.3
3,138,461	+		CCNA_02983	0.13	+0.2
3,138,464	-		CCNA_02983	0.14	-1.6
3,138,466	+		CCNA_02983	0.14	-0.8
3,138,469	-		CCNA_02983	0.14	+0.8
3,138,496	-		CCNA_02983	0.17	+0.1
3,138,513	-		CCNA_02983	0.19	+0.4
3,138,530	+		CCNA_02983	0.20	+0.8
3,138,570	+		CCNA_02983	0.24	+0.4
3,138,578	-		CCNA_02983	0.25	-0.4
3,138,578	-		CCNA_02983	0.25	+0.1
3,138,578	-		CCNA_02983	0.25	+0.2
3,138,597	-		CCNA_02983	0.27	-0.8
3,138,633	-		CCNA_02983	0.31	-1.1
3,138,673	-		CCNA_02983	0.35	-1.9
3,138,711	+		CCNA_02983	0.39	+1.0
3,138,730	+		CCNA_02983	0.40	+0.4
3,138,735	+		CCNA_02983	0.41	+0.8
3,138,735	+		CCNA_02983	0.41	+0.5
3,138,735	+		CCNA_02983	0.41	+0.9
3,138,735	+		CCNA_02983	0.41	+1.4
3,138,735	+		CCNA_02983	0.41	+1.2
3,138,738	-		CCNA_02983	0.41	+1.4
3,138,738	-		CCNA_02983	0.41	-0.4
3,138,743	-		CCNA_02983	0.42	+1.1
3,138,743	-		CCNA_02983	0.42	+0.3
3,138,790	+		CCNA_02983	0.47	+2.7
3,138,790	+		CCNA_02983	0.47	+0.0
3,138,790	+		CCNA_02983	0.47	-1.8
3,138,790	+		CCNA_02983	0.47	-0.6
3,138,798	-		CCNA_02983	0.47	+0.4
3,138,830	-		CCNA_02983	0.51	-0.5
3,138,837	+		CCNA_02983	0.51	+0.7
3,138,855	+		CCNA_02983	0.53	+1.1
3,138,880	+		CCNA_02983	0.56	+3.2
3,138,888	+		CCNA_02983	0.56	-2.3
3,138,908	-		CCNA_02983	0.58	+1.2
3,138,918	+		CCNA_02983	0.59	+0.8
3,138,930	+		CCNA_02983	0.61	+1.4
3,138,943	-		CCNA_02983	0.62	-0.1
3,138,944	+		CCNA_02983	0.62	+1.3
3,138,944	+		CCNA_02983	0.62	+4.4
3,138,952	-		CCNA_02983	0.63	-0.8
3,138,958	+		CCNA_02983	0.63	+0.5
3,138,963	+		CCNA_02983	0.64	-1.2
3,138,971	-		CCNA_02983	0.65	+0.8
3,139,018	-		CCNA_02983	0.69	-1.0
3,139,040	+		CCNA_02983	0.72	+1.2
3,139,080	-		CCNA_02983	0.76	-0.4
3,139,100	-		CCNA_02983	0.78	-2.0
3,139,102	+		CCNA_02983	0.78	+0.1
3,139,102	+		CCNA_02983	0.78	-0.0
3,139,107	+		CCNA_02983	0.78	-0.0
3,139,162	+		CCNA_02983	0.84	-2.5
3,139,207	+				+0.4
3,139,207	+		CCNA_02983	0.89	+1.0
3,139,210	-		CCNA_02983	0.89	-0.8
3,139,210	-		CCNA_02983	0.89	+2.4
3,139,267	+				+0.3