Experiment: Pyruvate-Sulfate (60-15mM) with Selenate 750uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt tRNA-Arg and DVU1694 are separated by 98 nucleotides DVU1694 and DVU1695 are separated by 15 nucleotides DVU1695 and DVU1696 overlap by 8 nucleotides DVU1696 and DVU1697 are separated by 2 nucleotides DVU1697 and DORF12810 are separated by 7 nucleotides
DVU_tRNA-Arg-4: tRNA-Arg - tRNA with anticodon CCT for Arg (VIMSS-AUTO), at 1,770,704 to 1,770,780
tRNA-Arg
DVU1694: DVU1694 - C4-type zinc finger protein, DksA/TraR family (TIGR), at 1,770,879 to 1,771,088
DVU1694
DVU1695: DVU1695 - tail fiber assembly protein, putative (TIGR), at 1,771,104 to 1,771,613
DVU1695
DVU1696: DVU1696 - hypothetical protein (TIGR), at 1,771,606 to 1,771,974
DVU1696
DVU1697: DVU1697 - hypothetical protein (TIGR), at 1,771,977 to 1,772,234
DVU1697
DORF12810: DORF12810 - no description, at 1,772,242 to 1,773,051
DORF12810
Position (kb)
1771
1772 Strain fitness (log2 ratio)
-1
0
1
2 at 1770.871 kb on + strand at 1770.881 kb on + strand at 1770.900 kb on - strand, within DVU1694 at 1770.927 kb on - strand, within DVU1694 at 1770.936 kb on + strand, within DVU1694 at 1770.945 kb on - strand, within DVU1694 at 1771.052 kb on - strand, within DVU1694 at 1771.059 kb on + strand, within DVU1694 at 1771.124 kb on - strand at 1771.124 kb on - strand at 1771.137 kb on - strand at 1771.183 kb on - strand, within DVU1695 at 1771.353 kb on - strand, within DVU1695 at 1771.353 kb on - strand, within DVU1695 at 1771.353 kb on - strand, within DVU1695 at 1771.492 kb on + strand, within DVU1695 at 1771.519 kb on + strand, within DVU1695 at 1771.527 kb on - strand, within DVU1695 at 1771.527 kb on - strand, within DVU1695 at 1771.622 kb on + strand at 1771.628 kb on - strand at 1771.630 kb on - strand at 1771.638 kb on - strand at 1771.715 kb on + strand, within DVU1696 at 1771.742 kb on + strand, within DVU1696 at 1772.515 kb on - strand, within DORF12810 at 1772.537 kb on + strand, within DORF12810 at 1772.635 kb on - strand, within DORF12810 at 1772.677 kb on + strand, within DORF12810 at 1772.769 kb on + strand, within DORF12810 at 1772.834 kb on - strand, within DORF12810 at 1772.850 kb on + strand, within DORF12810 at 1772.941 kb on + strand, within DORF12810 at 1772.948 kb on + strand, within DORF12810
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Selenate 750uM remove 1,770,871 + -0.0 1,770,881 + -0.3 1,770,900 - DVU1694 0.10 -0.2 1,770,927 - DVU1694 0.23 +0.2 1,770,936 + DVU1694 0.27 -0.3 1,770,945 - DVU1694 0.31 +0.5 1,771,052 - DVU1694 0.82 -0.3 1,771,059 + DVU1694 0.86 -0.0 1,771,124 - -0.5 1,771,124 - -0.6 1,771,137 - +0.8 1,771,183 - DVU1695 0.15 -1.2 1,771,353 - DVU1695 0.49 -0.5 1,771,353 - DVU1695 0.49 -0.0 1,771,353 - DVU1695 0.49 -0.5 1,771,492 + DVU1695 0.76 -0.3 1,771,519 + DVU1695 0.81 -0.6 1,771,527 - DVU1695 0.83 +0.9 1,771,527 - DVU1695 0.83 -1.5 1,771,622 + -0.3 1,771,628 - -0.7 1,771,630 - -0.1 1,771,638 - -1.6 1,771,715 + DVU1696 0.30 -0.2 1,771,742 + DVU1696 0.37 +1.8 1,772,515 - DORF12810 0.34 +1.0 1,772,537 + DORF12810 0.36 +0.6 1,772,635 - DORF12810 0.49 +0.0 1,772,677 + DORF12810 0.54 -0.2 1,772,769 + DORF12810 0.65 +0.0 1,772,834 - DORF12810 0.73 +2.2 1,772,850 + DORF12810 0.75 -0.1 1,772,941 + DORF12810 0.86 -0.1 1,772,948 + DORF12810 0.87 +0.7
Or see this region's nucleotide sequence