Experiment: Pyruvate-Sulfate (60-15mM) with Selenate 750uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DVU3313 and DORF47110 are separated by 93 nucleotides DORF47110 and DVU3314 are separated by 329 nucleotides
DVU3313: DVU3313 - transcriptional regulator, LysR family (TIGR), at 3,489,178 to 3,490,068
DVU3313
DORF47110: DORF47110 - no description, at 3,490,162 to 3,490,410
DORF47110
DVU3314: DVU3314 - peptidase, U32 family (TIGR), at 3,490,740 to 3,492,716
DVU3314
Position (kb)
3490
3491 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3489.218 kb on + strand at 3489.351 kb on + strand, within DVU3313 at 3489.359 kb on - strand, within DVU3313 at 3489.359 kb on - strand, within DVU3313 at 3489.424 kb on + strand, within DVU3313 at 3489.485 kb on + strand, within DVU3313 at 3489.520 kb on - strand, within DVU3313 at 3489.533 kb on - strand, within DVU3313 at 3489.550 kb on + strand, within DVU3313 at 3489.575 kb on - strand, within DVU3313 at 3489.580 kb on - strand, within DVU3313 at 3489.597 kb on - strand, within DVU3313 at 3489.642 kb on + strand, within DVU3313 at 3489.642 kb on + strand, within DVU3313 at 3489.650 kb on - strand, within DVU3313 at 3489.650 kb on - strand, within DVU3313 at 3489.808 kb on - strand, within DVU3313 at 3489.818 kb on - strand, within DVU3313 at 3489.829 kb on + strand, within DVU3313 at 3489.837 kb on - strand, within DVU3313 at 3489.840 kb on + strand, within DVU3313 at 3489.840 kb on + strand, within DVU3313 at 3489.848 kb on - strand, within DVU3313 at 3489.848 kb on - strand, within DVU3313 at 3489.870 kb on - strand, within DVU3313 at 3489.998 kb on - strand at 3489.998 kb on - strand at 3490.025 kb on + strand at 3490.126 kb on - strand at 3490.149 kb on - strand at 3490.152 kb on + strand at 3490.152 kb on + strand at 3490.187 kb on + strand, within DORF47110 at 3490.195 kb on - strand, within DORF47110 at 3490.207 kb on - strand, within DORF47110 at 3490.370 kb on - strand, within DORF47110 at 3490.370 kb on - strand, within DORF47110 at 3490.470 kb on - strand at 3490.481 kb on - strand at 3490.495 kb on + strand at 3490.495 kb on + strand at 3490.495 kb on + strand at 3490.503 kb on - strand at 3490.503 kb on - strand at 3490.503 kb on - strand at 3490.601 kb on + strand at 3490.650 kb on - strand at 3490.703 kb on + strand at 3490.831 kb on - strand at 3490.910 kb on - strand at 3490.921 kb on + strand at 3490.921 kb on + strand at 3491.239 kb on + strand, within DVU3314 at 3491.298 kb on - strand, within DVU3314 at 3491.331 kb on - strand, within DVU3314 at 3491.331 kb on - strand, within DVU3314 at 3491.346 kb on + strand, within DVU3314
Per-strain Table
Position Strand Gene LocusTag Fraction Pyruvate-Sulfate (60-15mM) with Selenate 750uM remove 3,489,218 + -0.5 3,489,351 + DVU3313 0.19 +0.1 3,489,359 - DVU3313 0.20 -0.4 3,489,359 - DVU3313 0.20 -0.0 3,489,424 + DVU3313 0.28 -0.6 3,489,485 + DVU3313 0.34 +1.3 3,489,520 - DVU3313 0.38 -0.0 3,489,533 - DVU3313 0.40 +1.7 3,489,550 + DVU3313 0.42 -0.6 3,489,575 - DVU3313 0.45 -0.7 3,489,580 - DVU3313 0.45 +0.1 3,489,597 - DVU3313 0.47 +0.1 3,489,642 + DVU3313 0.52 -1.9 3,489,642 + DVU3313 0.52 -1.1 3,489,650 - DVU3313 0.53 +0.8 3,489,650 - DVU3313 0.53 +0.3 3,489,808 - DVU3313 0.71 +0.3 3,489,818 - DVU3313 0.72 -0.7 3,489,829 + DVU3313 0.73 -0.8 3,489,837 - DVU3313 0.74 -0.1 3,489,840 + DVU3313 0.74 -0.3 3,489,840 + DVU3313 0.74 +1.1 3,489,848 - DVU3313 0.75 -0.1 3,489,848 - DVU3313 0.75 +0.9 3,489,870 - DVU3313 0.78 +0.2 3,489,998 - -0.6 3,489,998 - +0.7 3,490,025 + -0.0 3,490,126 - -0.3 3,490,149 - -2.2 3,490,152 + +0.1 3,490,152 + -0.5 3,490,187 + DORF47110 0.10 +1.0 3,490,195 - DORF47110 0.13 -0.4 3,490,207 - DORF47110 0.18 +0.8 3,490,370 - DORF47110 0.84 +0.7 3,490,370 - DORF47110 0.84 -0.1 3,490,470 - -0.0 3,490,481 - -0.7 3,490,495 + -0.1 3,490,495 + -0.3 3,490,495 + -0.0 3,490,503 - +0.2 3,490,503 - +0.1 3,490,503 - -0.4 3,490,601 + -0.3 3,490,650 - -0.5 3,490,703 + -2.5 3,490,831 - -2.0 3,490,910 - -1.5 3,490,921 + -0.1 3,490,921 + -1.6 3,491,239 + DVU3314 0.25 -0.6 3,491,298 - DVU3314 0.28 +1.1 3,491,331 - DVU3314 0.30 -0.0 3,491,331 - DVU3314 0.30 +2.7 3,491,346 + DVU3314 0.31 -0.2
Or see this region's nucleotide sequence