Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1765

Experiment: BG11 with Nalidixic 0.001953125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Nalidixic 0.001953125 mg/ml
1,831,307	+		Synpcc7942_1763	0.34	+0.3
1,831,315	-		Synpcc7942_1763	0.35	-1.5
1,831,354	+		Synpcc7942_1763	0.40	+0.6
1,831,414	+		Synpcc7942_1763	0.47	+0.1
1,831,444	+		Synpcc7942_1763	0.51	-0.4
1,831,452	-		Synpcc7942_1763	0.52	-0.1
1,831,452	-		Synpcc7942_1763	0.52	-1.0
1,831,452	-		Synpcc7942_1763	0.52	-0.2
1,831,452	-		Synpcc7942_1763	0.52	-1.9
1,831,470	+		Synpcc7942_1763	0.54	+0.1
1,831,493	-		Synpcc7942_1763	0.57	+0.2
1,831,498	-		Synpcc7942_1763	0.57	-1.6
1,831,510	+		Synpcc7942_1763	0.59	-0.0
1,831,510	+		Synpcc7942_1763	0.59	+0.9
1,831,541	+		Synpcc7942_1763	0.63	+1.0
1,831,567	-		Synpcc7942_1763	0.66	-1.9
1,831,583	+		Synpcc7942_1763	0.68	-0.3
1,831,618	+		Synpcc7942_1763	0.72	+0.2
1,831,621	-		Synpcc7942_1763	0.72	+0.3
1,831,621	-		Synpcc7942_1763	0.72	+0.3
1,831,621	-		Synpcc7942_1763	0.72	-1.5
1,831,630	+		Synpcc7942_1763	0.74	-0.9
1,831,638	-		Synpcc7942_1763	0.74	+0.4
1,831,658	-		Synpcc7942_1763	0.77	-0.2
1,831,687	+		Synpcc7942_1763	0.80	+1.1
1,831,705	+		Synpcc7942_1763	0.83	-0.7
1,831,794	+				+1.2
1,831,819	+				-0.4
1,831,819	+				+0.2
1,831,819	-				+0.4
1,831,832	+				+0.4
1,831,832	+				+0.4
1,831,843	+				+1.0
1,831,849	-				+0.9
1,831,916	-		Synpcc7942_1764	0.15	+0.5
1,831,921	-		Synpcc7942_1764	0.16	-0.8
1,831,964	-		Synpcc7942_1764	0.28	+0.6
1,831,978	+		Synpcc7942_1764	0.31	+0.4
1,831,978	+		Synpcc7942_1764	0.31	-1.5
1,831,986	-		Synpcc7942_1764	0.34	-0.2
1,831,986	-		Synpcc7942_1764	0.34	-1.1
1,832,005	+		Synpcc7942_1764	0.39	-0.3
1,832,010	+		Synpcc7942_1764	0.40	-0.0
1,832,010	+		Synpcc7942_1764	0.40	+0.8
1,832,010	+		Synpcc7942_1764	0.40	-0.1
1,832,011	+		Synpcc7942_1764	0.40	-2.1
1,832,051	+		Synpcc7942_1764	0.51	-0.9
1,832,051	-		Synpcc7942_1764	0.51	-1.0
1,832,052	-		Synpcc7942_1764	0.51	-0.3
1,832,059	-		Synpcc7942_1764	0.53	-0.5
1,832,066	+		Synpcc7942_1764	0.55	-2.2
1,832,066	+		Synpcc7942_1764	0.55	-0.2
1,832,074	-		Synpcc7942_1764	0.57	+0.3
1,832,074	-				-0.3
1,832,074	-		Synpcc7942_1764	0.57	-0.7
1,832,074	-		Synpcc7942_1764	0.57	+0.3
1,832,074	-		Synpcc7942_1764	0.57	-0.5
1,832,089	+		Synpcc7942_1764	0.62	-0.8
1,832,106	+		Synpcc7942_1764	0.66	-0.6
1,832,106	+		Synpcc7942_1764	0.66	+0.8
1,832,205	-				-0.2
1,832,232	-				+0.5
1,832,242	+				+0.1
1,832,250	-				-0.5
1,832,262	-				+0.9
1,832,291	+				-0.0
1,832,303	-				-0.2
1,832,359	+		Synpcc7942_1765	0.11	+0.3
1,832,367	-		Synpcc7942_1765	0.13	+0.2
1,832,367	-		Synpcc7942_1765	0.13	-2.2
1,832,398	-		Synpcc7942_1765	0.19	-1.2
1,832,419	+		Synpcc7942_1765	0.23	-1.5
1,832,439	+		Synpcc7942_1765	0.27	-2.2
1,832,489	+		Synpcc7942_1765	0.37	-0.4
1,832,489	+		Synpcc7942_1765	0.37	-0.8
1,832,497	-		Synpcc7942_1765	0.38	-0.5
1,832,589	-		Synpcc7942_1765	0.57	+0.0
1,832,662	-		Synpcc7942_1765	0.71	-0.6
1,832,675	-		Synpcc7942_1765	0.74	-2.4
1,832,710	-		Synpcc7942_1765	0.81	-1.6
1,832,713	-		Synpcc7942_1765	0.81	-2.2
1,832,764	+				-2.3
1,832,768	+				+1.5
1,832,792	+				+0.8
1,832,811	+				-0.4
1,832,815	+				-0.8
1,832,825	-				+1.1
1,832,835	+				-0.0
1,832,843	-				+0.4
1,832,848	-				-0.6
1,832,896	+				-0.1
1,832,922	-				+0.7
1,832,932	-				+0.3
1,832,969	+				+0.3
1,832,982	+				+1.6
1,832,982	+				+0.0
1,832,990	-				+0.5
1,832,990	-				-0.3
1,833,003	-				+0.5
1,833,166	-	cydB	Synpcc7942_1766	0.16	+0.3
1,833,206	-	cydB	Synpcc7942_1766	0.20	-0.5
1,833,309	+	cydB	Synpcc7942_1766	0.30	-1.5
1,833,347	+	cydB	Synpcc7942_1766	0.34	-0.4
1,833,392	-	cydB	Synpcc7942_1766	0.38	-0.8
1,833,393	-	cydB	Synpcc7942_1766	0.38	-1.6
1,833,395	-	cydB	Synpcc7942_1766	0.38	-1.2
1,833,411	+	cydB	Synpcc7942_1766	0.40	-0.8
1,833,428	-				+1.2
1,833,443	-	cydB	Synpcc7942_1766	0.43	+0.4
1,833,448	+	cydB	Synpcc7942_1766	0.44	-0.0
1,833,459	+	cydB	Synpcc7942_1766	0.45	-0.1
1,833,459	+	cydB	Synpcc7942_1766	0.45	-0.2
1,833,459	+	cydB	Synpcc7942_1766	0.45	+0.2
1,833,467	-	cydB	Synpcc7942_1766	0.45	-0.6
1,833,467	-	cydB	Synpcc7942_1766	0.45	-0.8
1,833,467	-	cydB	Synpcc7942_1766	0.45	+0.5
1,833,502	+	cydB	Synpcc7942_1766	0.49	-0.6
1,833,510	-	cydB	Synpcc7942_1766	0.50	-0.3
1,833,523	-	cydB	Synpcc7942_1766	0.51	-0.8
1,833,533	-	cydB	Synpcc7942_1766	0.52	-0.2
1,833,533	-	cydB	Synpcc7942_1766	0.52	-0.5
1,833,545	-	cydB	Synpcc7942_1766	0.53	+0.5
1,833,573	+	cydB	Synpcc7942_1766	0.56	-1.1