Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_2044

Experiment: Calcium chloride 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Calcium chloride 0.0125 M
2,434,176	-		Pf6N2E2_2043	0.53	-0.2
2,434,177	+		Pf6N2E2_2043	0.53	-1.1
2,434,177	+		Pf6N2E2_2043	0.53	+1.1
2,434,177	+		Pf6N2E2_2043	0.53	+0.5
2,434,177	+		Pf6N2E2_2043	0.53	-1.1
2,434,178	-		Pf6N2E2_2043	0.53	+0.2
2,434,178	-		Pf6N2E2_2043	0.53	+1.4
2,434,178	-		Pf6N2E2_2043	0.53	+0.5
2,434,320	+		Pf6N2E2_2043	0.65	-0.1
2,434,605	-		Pf6N2E2_2043	0.89	-0.3
2,434,605	-		Pf6N2E2_2043	0.89	+1.3
2,434,605	-		Pf6N2E2_2043	0.89	+0.2
2,434,612	+		Pf6N2E2_2043	0.89	-0.9
2,434,612	+		Pf6N2E2_2043	0.89	+0.6
2,434,612	+		Pf6N2E2_2043	0.89	-0.4
2,434,612	+		Pf6N2E2_2043	0.89	-1.3
2,434,613	-		Pf6N2E2_2043	0.89	-0.6
2,434,613	-		Pf6N2E2_2043	0.89	-0.1
2,434,613	-		Pf6N2E2_2043	0.89	-0.8
2,434,613	-		Pf6N2E2_2043	0.89	+0.3
2,434,741	+				-0.8
2,434,742	-				+0.0
2,434,742	-				+0.7
2,434,757	+				-0.7
2,434,757	+				+0.6
2,434,758	-				+0.1
2,434,760	+				+0.0
2,434,761	-				-0.6
2,434,761	-				+0.5
2,434,826	+				+0.0
2,434,828	+				+3.1
2,434,828	+				+0.3
2,434,828	+				-0.8
2,434,828	+				+2.3
2,434,828	+				+0.3
2,434,828	+				+0.8
2,434,828	+				-0.2
2,434,828	+				+0.7
2,434,828	+				+0.8
2,434,829	-				-0.0
2,434,829	-				+0.8
2,434,829	-				-0.7
2,434,829	-				+0.8
2,434,829	-				-1.0
2,434,829	-				+0.6
2,434,829	-				-0.1
2,434,829	-				+0.7
2,434,977	+				+0.4
2,435,042	+				+2.0
2,435,043	-				+0.1
2,435,043	-				-1.3
2,435,066	+		Pf6N2E2_2044	0.10	+1.5
2,435,066	+		Pf6N2E2_2044	0.10	+1.6
2,435,082	+		Pf6N2E2_2044	0.11	+0.5
2,435,082	+		Pf6N2E2_2044	0.11	-0.1
2,435,083	-		Pf6N2E2_2044	0.11	+2.9
2,435,083	-		Pf6N2E2_2044	0.11	-1.1
2,435,083	-		Pf6N2E2_2044	0.11	-0.4
2,435,083	-		Pf6N2E2_2044	0.11	-0.5
2,435,083	-		Pf6N2E2_2044	0.11	+0.5
2,435,138	-		Pf6N2E2_2044	0.13	+0.1
2,435,181	+		Pf6N2E2_2044	0.15	+0.2
2,435,181	+		Pf6N2E2_2044	0.15	+0.6
2,435,181	+		Pf6N2E2_2044	0.15	+1.5
2,435,181	+		Pf6N2E2_2044	0.15	-0.5
2,435,181	+		Pf6N2E2_2044	0.15	+0.5
2,435,181	+		Pf6N2E2_2044	0.15	-0.5
2,435,182	-		Pf6N2E2_2044	0.15	-1.6
2,435,394	-		Pf6N2E2_2044	0.23	+0.7
2,435,457	-		Pf6N2E2_2044	0.26	-0.3
2,435,457	-		Pf6N2E2_2044	0.26	+1.7
2,435,556	+		Pf6N2E2_2044	0.30	+0.3
2,435,595	+		Pf6N2E2_2044	0.31	+0.9
2,435,595	+		Pf6N2E2_2044	0.31	-1.0
2,435,595	+		Pf6N2E2_2044	0.31	+0.7
2,435,596	-		Pf6N2E2_2044	0.31	-0.3
2,435,613	+		Pf6N2E2_2044	0.32	+0.6
2,435,613	+		Pf6N2E2_2044	0.32	+0.0
2,435,613	+		Pf6N2E2_2044	0.32	-0.4
2,435,614	-		Pf6N2E2_2044	0.32	+0.1
2,435,754	+		Pf6N2E2_2044	0.38	+0.1
2,435,755	-		Pf6N2E2_2044	0.38	-0.2
2,435,755	-		Pf6N2E2_2044	0.38	+0.0
2,435,796	+		Pf6N2E2_2044	0.39	-0.7
2,435,797	-		Pf6N2E2_2044	0.39	-0.5
2,435,809	-		Pf6N2E2_2044	0.40	+0.2
2,435,871	+		Pf6N2E2_2044	0.42	-1.0
2,435,871	+		Pf6N2E2_2044	0.42	+1.3
2,435,979	+		Pf6N2E2_2044	0.46	-1.6
2,435,979	+		Pf6N2E2_2044	0.46	+0.1
2,435,979	+		Pf6N2E2_2044	0.46	+1.4
2,435,979	+		Pf6N2E2_2044	0.46	-0.1
2,435,980	-		Pf6N2E2_2044	0.46	+0.7
2,435,980	-		Pf6N2E2_2044	0.46	+0.5
2,436,021	+		Pf6N2E2_2044	0.48	-0.3
2,436,022	-		Pf6N2E2_2044	0.48	+1.3
2,436,022	-		Pf6N2E2_2044	0.48	+1.3
2,436,022	-		Pf6N2E2_2044	0.48	-0.0
2,436,022	-		Pf6N2E2_2044	0.48	+1.1
2,436,297	+		Pf6N2E2_2044	0.59	+0.6
2,436,297	+		Pf6N2E2_2044	0.59	+0.7
2,436,298	-		Pf6N2E2_2044	0.59	+0.2
2,436,298	-		Pf6N2E2_2044	0.59	+0.7
2,436,639	+		Pf6N2E2_2044	0.72	-1.4
2,436,640	-		Pf6N2E2_2044	0.72	+0.7
2,436,690	+		Pf6N2E2_2044	0.74	+0.8
2,436,690	+		Pf6N2E2_2044	0.74	-1.0
2,436,691	-		Pf6N2E2_2044	0.75	-0.3
2,436,892	-		Pf6N2E2_2044	0.82	+0.6
2,436,892	-		Pf6N2E2_2044	0.82	+0.3
2,437,347	+				+0.7
2,437,347	+				-0.4
2,437,348	-				+0.6
2,437,348	-				+0.7
2,437,348	-				+0.8
2,437,492	-		Pf6N2E2_2045	0.38	+0.9
2,437,537	+		Pf6N2E2_2045	0.55	-1.0
2,437,538	-		Pf6N2E2_2045	0.55	-0.3
2,437,651	-				+2.2
2,437,970	-		Pf6N2E2_2046	0.12	-0.7
2,438,041	+		Pf6N2E2_2046	0.20	+0.5
2,438,041	+		Pf6N2E2_2046	0.20	+0.9
2,438,041	+		Pf6N2E2_2046	0.20	-0.6
2,438,042	-		Pf6N2E2_2046	0.20	-0.8
2,438,042	-		Pf6N2E2_2046	0.20	+0.2
2,438,092	-		Pf6N2E2_2046	0.25	+0.8
2,438,120	-		Pf6N2E2_2046	0.28	-0.6
2,438,120	-		Pf6N2E2_2046	0.28	-1.1
2,438,176	-		Pf6N2E2_2046	0.34	-0.5
2,438,200	+		Pf6N2E2_2046	0.37	-0.5
2,438,219	-		Pf6N2E2_2046	0.39	-0.2