Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1460

Experiment: Calcium chloride 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Calcium chloride 0.0125 M
1,707,845	+				+0.6
1,707,845	+				+0.4
1,707,846	-				-0.3
1,707,854	-				-0.1
1,707,986	+		Pf6N2E2_1459	0.13	-0.3
1,707,986	+		Pf6N2E2_1459	0.13	+0.4
1,707,987	-		Pf6N2E2_1459	0.13	-1.2
1,707,987	-		Pf6N2E2_1459	0.13	-0.9
1,708,292	+		Pf6N2E2_1459	0.47	-0.3
1,708,293	-		Pf6N2E2_1459	0.47	+1.4
1,708,293	-		Pf6N2E2_1459	0.47	-0.0
1,708,293	-		Pf6N2E2_1459	0.47	-0.6
1,708,361	+		Pf6N2E2_1459	0.55	+0.1
1,708,361	+		Pf6N2E2_1459	0.55	+1.9
1,708,361	+		Pf6N2E2_1459	0.55	+0.7
1,708,361	+		Pf6N2E2_1459	0.55	-1.2
1,708,362	-		Pf6N2E2_1459	0.55	-0.0
1,708,362	-		Pf6N2E2_1459	0.55	+0.3
1,708,362	-		Pf6N2E2_1459	0.55	+0.4
1,708,672	+		Pf6N2E2_1459	0.89	+0.0
1,708,673	-		Pf6N2E2_1459	0.89	-0.6
1,708,769	-				+0.7
1,708,907	-		Pf6N2E2_1460	0.12	-0.2
1,709,019	-		Pf6N2E2_1460	0.21	-0.8
1,709,229	+		Pf6N2E2_1460	0.40	-0.9
1,709,229	+		Pf6N2E2_1460	0.40	-3.5
1,709,275	-		Pf6N2E2_1460	0.44	-0.2
1,709,275	-		Pf6N2E2_1460	0.44	-0.6
1,709,373	+		Pf6N2E2_1460	0.52	+0.1
1,709,374	-		Pf6N2E2_1460	0.52	-0.1
1,709,640	+		Pf6N2E2_1460	0.76	-0.8
1,709,679	+		Pf6N2E2_1460	0.79	-1.1
1,709,680	-		Pf6N2E2_1460	0.79	+1.4
1,710,143	+				-0.0
1,710,143	+				+0.2
1,710,144	-				+0.1
1,710,144	-				-0.7
1,710,144	-				+0.0
1,710,144	-				+0.5
1,710,144	-				-0.1
1,710,144	-				-0.2
1,710,144	-				+0.3
1,710,144	-				-0.0
1,710,144	-				+0.0
1,710,145	+				+0.6
1,710,145	+				-0.4
1,710,145	+				-0.4
1,710,145	+				-0.6
1,710,145	+				-0.6
1,710,145	+				-1.0
1,710,146	-				-0.5
1,710,146	-				+0.0
1,710,146	-				-0.9
1,710,205	+				-0.5
1,710,206	-				+0.5
1,710,206	-				+0.1
1,710,206	-				-0.3
1,710,252	-				+1.4
1,710,338	+				+1.3
1,710,339	-				-0.5
1,710,383	-				+0.7
1,710,383	-				-0.2
1,710,383	-				-0.4
1,710,391	-				-0.6
1,710,391	-				-1.1
1,710,391	-				-0.0
1,710,533	-		Pf6N2E2_1461	0.50	-0.1
1,710,662	+				-1.2
1,710,769	+				+0.0
1,710,828	+				+0.8
1,710,828	+				-0.8