Strain Fitness in Pantoea sp. MT58 around IAI47_10330

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
2,185,368	+		IAI47_10325	0.39	+0.9
2,185,369	-		IAI47_10325	0.39	-0.2
2,185,369	-		IAI47_10325	0.39	+0.9
2,185,369	-		IAI47_10325	0.39	+0.2
2,185,549	-		IAI47_10325	0.54	+0.7
2,185,550	+		IAI47_10325	0.54	-0.6
2,185,550	+		IAI47_10325	0.54	-0.7
2,185,550	+		IAI47_10325	0.54	-0.7
2,185,550	+		IAI47_10325	0.54	+0.6
2,185,550	+		IAI47_10325	0.54	+0.5
2,185,551	-		IAI47_10325	0.54	-0.5
2,185,551	-		IAI47_10325	0.54	+1.4
2,185,551	-		IAI47_10325	0.54	-0.6
2,185,551	-		IAI47_10325	0.54	+1.6
2,185,551	-		IAI47_10325	0.54	+0.8
2,185,551	-		IAI47_10325	0.54	+1.0
2,185,587	+		IAI47_10325	0.57	-0.2
2,185,588	-		IAI47_10325	0.57	+1.1
2,185,624	+		IAI47_10325	0.60	+1.3
2,185,625	-		IAI47_10325	0.60	+0.2
2,185,625	-		IAI47_10325	0.60	+1.9
2,185,677	+		IAI47_10325	0.65	+0.3
2,185,677	+		IAI47_10325	0.65	-0.1
2,185,677	+		IAI47_10325	0.65	-0.2
2,185,677	+		IAI47_10325	0.65	-0.3
2,185,677	+		IAI47_10325	0.65	-0.4
2,185,678	-		IAI47_10325	0.65	-0.1
2,185,678	-		IAI47_10325	0.65	-0.9
2,185,678	-		IAI47_10325	0.65	-1.6
2,185,678	-		IAI47_10325	0.65	+0.6
2,185,678	-		IAI47_10325	0.65	-1.1
2,185,712	+		IAI47_10325	0.68	+0.3
2,185,712	+		IAI47_10325	0.68	+0.8
2,185,712	+		IAI47_10325	0.68	-1.4
2,185,712	+		IAI47_10325	0.68	-0.6
2,185,713	-		IAI47_10325	0.68	+1.6
2,185,713	-		IAI47_10325	0.68	+0.7
2,185,713	-		IAI47_10325	0.68	-0.0
2,185,713	-		IAI47_10325	0.68	+1.4
2,185,713	-		IAI47_10325	0.68	+1.4
2,185,745	+		IAI47_10325	0.70	-0.7
2,185,745	+		IAI47_10325	0.70	-0.2
2,185,745	+		IAI47_10325	0.70	+1.1
2,185,745	+		IAI47_10325	0.70	+1.6
2,185,746	-		IAI47_10325	0.70	+1.0
2,185,746	-		IAI47_10325	0.70	-0.7
2,185,773	+		IAI47_10325	0.73	-1.2
2,185,773	+		IAI47_10325	0.73	+0.3
2,185,774	-		IAI47_10325	0.73	+0.0
2,185,774	-		IAI47_10325	0.73	+2.0
2,185,777	+		IAI47_10325	0.73	+0.1
2,185,777	+		IAI47_10325	0.73	+0.6
2,185,777	+		IAI47_10325	0.73	-1.2
2,185,777	+		IAI47_10325	0.73	-1.0
2,185,778	-		IAI47_10325	0.73	+0.5
2,185,778	-		IAI47_10325	0.73	+0.4
2,185,815	-		IAI47_10325	0.76	+1.1
2,185,815	-		IAI47_10325	0.76	-1.2
2,185,890	+		IAI47_10325	0.82	-0.2
2,185,890	+		IAI47_10325	0.82	-1.0
2,185,943	-		IAI47_10325	0.87	-0.0
2,186,003	-				+0.8
2,186,003	-				+2.1
2,186,015	+				-1.2
2,186,015	+				-1.4
2,186,015	+				+0.5
2,186,016	-				+1.7
2,186,016	-				-0.6
2,186,016	-				+2.2
2,186,038	+				-0.2
2,186,038	+				+1.1
2,186,038	+				+0.6
2,186,038	+				-0.3
2,186,039	-				+0.5
2,186,039	-				-0.5
2,186,039	-				+0.5
2,186,039	-				+0.3
2,186,113	+				-0.5
2,186,114	-				-0.6
2,186,114	-				-2.7
2,186,130	+				+1.0
2,186,130	+				-0.3
2,186,132	+				+0.4
2,186,133	-				-1.0
2,186,233	-				-1.2
2,186,235	-				+1.7
2,186,281	+				-0.3
2,186,282	-				-0.2
2,186,282	-				+0.7
2,186,282	-				-0.2
2,186,282	-				-0.3
2,186,282	-				-0.7
2,186,282	-				-0.4
2,186,282	-				-0.0
2,186,282	-				+1.2
2,186,282	-				-0.2
2,186,285	+				+2.0
2,186,285	+				+0.6
2,186,285	+				+1.0
2,186,286	-				+1.1
2,186,286	-				-0.4
2,186,308	+				+3.0
2,186,308	+				+0.6
2,186,308	+				+1.4
2,186,315	+				-1.0
2,186,315	+				+1.3
2,186,316	-				+1.4
2,186,316	-				+1.4
2,186,325	+				-0.1
2,186,325	+				+3.0
2,186,325	+				+1.0
2,186,326	-				+0.6
2,186,326	-				+0.4
2,186,388	+				+2.1
2,186,388	+				+0.9
2,186,389	-				-0.4
2,186,389	-				-1.6
2,186,389	-				-1.0
2,186,389	-				+1.6
2,186,389	-				-1.6
2,186,389	-				-0.9
2,186,434	-		IAI47_10330	0.15	+0.6
2,186,519	-		IAI47_10330	0.24	+0.8
2,186,519	-		IAI47_10330	0.24	-0.7
2,186,519	-		IAI47_10330	0.24	-0.9
2,186,533	-		IAI47_10330	0.25	-0.0
2,186,533	-		IAI47_10330	0.25	+0.0
2,186,573	+		IAI47_10330	0.29	-0.2
2,186,574	-		IAI47_10330	0.30	+0.1
2,186,595	+		IAI47_10330	0.32	+0.3
2,186,595	+		IAI47_10330	0.32	+2.0
2,186,595	+		IAI47_10330	0.32	+0.3
2,186,596	-		IAI47_10330	0.32	-1.0
2,186,646	+		IAI47_10330	0.37	+1.0
2,186,647	-		IAI47_10330	0.37	-0.9
2,186,647	-		IAI47_10330	0.37	+0.0
2,186,647	-		IAI47_10330	0.37	+1.8
2,186,765	-		IAI47_10330	0.50	+0.2
2,186,775	+		IAI47_10330	0.51	+0.3
2,186,775	+		IAI47_10330	0.51	+1.2
2,186,829	+		IAI47_10330	0.57	+1.5
2,186,829	+		IAI47_10330	0.57	+1.2
2,186,829	+		IAI47_10330	0.57	+0.2
2,186,829	+		IAI47_10330	0.57	+3.1
2,186,829	+		IAI47_10330	0.57	+2.5
2,186,830	-		IAI47_10330	0.57	+1.5
2,186,830	-		IAI47_10330	0.57	-0.2
2,186,954	+		IAI47_10330	0.70	+1.0
2,187,074	+		IAI47_10330	0.83	+1.0
2,187,122	+		IAI47_10330	0.88	+1.3
2,187,122	+		IAI47_10330	0.88	+3.1
2,187,122	+		IAI47_10330	0.88	-1.0
2,187,131	-		IAI47_10330	0.89	+0.4
2,187,131	-		IAI47_10330	0.89	-0.2
2,187,146	+				+2.0
2,187,146	+				-1.4
2,187,146	+				+0.4
2,187,146	+				-0.1
2,187,146	+				-0.6
2,187,146	+				+1.4
2,187,147	-				+0.4
2,187,159	+				+0.2
2,187,160	-				+1.4
2,187,230	+				+0.0
2,187,230	+				-0.5
2,187,271	+				+0.2
2,187,335	+				+0.4
2,187,336	-				+0.5
2,187,340	+				-0.9
2,187,367	-				+1.6
2,187,419	-		IAI47_10335	0.10	+1.1
2,187,419	-		IAI47_10335	0.10	+0.6
2,187,425	+		IAI47_10335	0.11	+0.8
2,187,425	+		IAI47_10335	0.11	-0.0
2,187,426	-		IAI47_10335	0.11	+0.4
2,187,426	-		IAI47_10335	0.11	-0.3
2,187,426	-		IAI47_10335	0.11	+0.4
2,187,426	-		IAI47_10335	0.11	+0.9
2,187,426	-		IAI47_10335	0.11	-0.4
2,187,426	-		IAI47_10335	0.11	-2.3
2,187,431	+		IAI47_10335	0.11	+1.5
2,187,432	-		IAI47_10335	0.11	+1.4
2,187,432	-		IAI47_10335	0.11	+0.4
2,187,432	-		IAI47_10335	0.11	+0.4
2,187,479	+		IAI47_10335	0.15	-0.2
2,187,521	+		IAI47_10335	0.18	+0.0
2,187,521	+		IAI47_10335	0.18	+0.1
2,187,522	-		IAI47_10335	0.18	+0.6
2,187,522	-		IAI47_10335	0.18	+0.6
2,187,522	-		IAI47_10335	0.18	-1.1
2,187,522	-		IAI47_10335	0.18	-0.0
2,187,522	-		IAI47_10335	0.18	-0.7
2,187,522	-		IAI47_10335	0.18	-1.2
2,187,522	-		IAI47_10335	0.18	-1.9
2,187,522	-		IAI47_10335	0.18	-0.9
2,187,569	+		IAI47_10335	0.21	-0.4
2,187,569	+		IAI47_10335	0.21	+2.2
2,187,570	-		IAI47_10335	0.21	-0.1
2,187,570	-		IAI47_10335	0.21	+0.4
2,187,570	-		IAI47_10335	0.21	+0.3
2,187,570	-		IAI47_10335	0.21	+0.6
2,187,626	+		IAI47_10335	0.25	+0.5
2,187,626	+		IAI47_10335	0.25	+0.8
2,187,626	+		IAI47_10335	0.25	+0.6
2,187,626	+		IAI47_10335	0.25	+0.2
2,187,627	-		IAI47_10335	0.25	-1.1
2,187,627	-		IAI47_10335	0.25	-0.4
2,187,627	-		IAI47_10335	0.25	+0.1
2,187,629	+		IAI47_10335	0.25	+0.4
2,187,629	+		IAI47_10335	0.25	-1.5
2,187,630	-		IAI47_10335	0.26	+0.7
2,187,630	-		IAI47_10335	0.26	+0.8
2,187,630	-		IAI47_10335	0.26	+0.6
2,187,719	+		IAI47_10335	0.32	-0.1
2,187,740	+		IAI47_10335	0.33	+1.3
2,187,740	+		IAI47_10335	0.33	-0.6
2,187,741	-		IAI47_10335	0.33	+1.2
2,187,885	-		IAI47_10335	0.44	+1.6
2,187,947	-		IAI47_10335	0.48	+2.3
2,187,959	+		IAI47_10335	0.49	-0.0
2,188,028	+		IAI47_10335	0.54	-0.3
2,188,029	-		IAI47_10335	0.54	+1.1
2,188,029	-		IAI47_10335	0.54	-0.5
2,188,029	-		IAI47_10335	0.54	+0.2
2,188,040	+		IAI47_10335	0.55	-0.6
2,188,040	+		IAI47_10335	0.55	-0.4
2,188,040	+		IAI47_10335	0.55	-0.5
2,188,041	-		IAI47_10335	0.55	+0.4
2,188,041	-		IAI47_10335	0.55	+0.5
2,188,041	-		IAI47_10335	0.55	-0.7
2,188,041	-		IAI47_10335	0.55	+1.3
2,188,041	-		IAI47_10335	0.55	+1.9
2,188,113	-		IAI47_10335	0.60	+1.0
2,188,130	+		IAI47_10335	0.61	+1.6
2,188,136	+		IAI47_10335	0.62	+0.3