Strain Fitness in Pantoea sp. MT58 around IAI47_05660

Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
1,187,237	+		IAI47_05650	0.31	+1.1
1,187,237	+		IAI47_05650	0.31	-0.2
1,187,237	+		IAI47_05650	0.31	+4.1
1,187,267	+		IAI47_05650	0.34	+0.3
1,187,268	-		IAI47_05650	0.35	+0.3
1,187,318	+		IAI47_05650	0.41	+0.3
1,187,319	-		IAI47_05650	0.41	-1.6
1,187,328	+		IAI47_05650	0.42	+2.5
1,187,329	-		IAI47_05650	0.42	+0.9
1,187,329	-		IAI47_05650	0.42	-1.5
1,187,330	+		IAI47_05650	0.42	+0.1
1,187,330	+		IAI47_05650	0.42	+0.6
1,187,330	+		IAI47_05650	0.42	+0.6
1,187,330	+		IAI47_05650	0.42	-0.7
1,187,330	+		IAI47_05650	0.42	+0.6
1,187,330	+		IAI47_05650	0.42	+1.4
1,187,330	+		IAI47_05650	0.42	+0.1
1,187,330	+		IAI47_05650	0.42	+1.1
1,187,330	+		IAI47_05650	0.42	+0.1
1,187,330	+		IAI47_05650	0.42	-0.3
1,187,330	+		IAI47_05650	0.42	-1.2
1,187,330	+		IAI47_05650	0.42	-0.2
1,187,330	+		IAI47_05650	0.42	-0.7
1,187,331	-		IAI47_05650	0.43	-0.1
1,187,331	-		IAI47_05650	0.43	-0.1
1,187,331	-		IAI47_05650	0.43	+0.0
1,187,331	-		IAI47_05650	0.43	-0.1
1,187,331	-		IAI47_05650	0.43	-1.7
1,187,331	-		IAI47_05650	0.43	-0.3
1,187,334	-		IAI47_05650	0.43	-0.3
1,187,350	+		IAI47_05650	0.45	+0.3
1,187,350	+		IAI47_05650	0.45	+1.0
1,187,353	+		IAI47_05650	0.45	-0.5
1,187,353	+		IAI47_05650	0.45	+1.6
1,187,354	-		IAI47_05650	0.46	-0.0
1,187,354	-		IAI47_05650	0.46	-0.7
1,187,354	-		IAI47_05650	0.46	-0.4
1,187,354	-		IAI47_05650	0.46	-1.0
1,187,365	+		IAI47_05650	0.47	+2.2
1,187,417	+		IAI47_05650	0.53	+0.0
1,187,418	-		IAI47_05650	0.54	+0.3
1,187,419	+		IAI47_05650	0.54	-0.9
1,187,419	+		IAI47_05650	0.54	-0.4
1,187,420	-		IAI47_05650	0.54	+0.7
1,187,420	-		IAI47_05650	0.54	-0.3
1,187,420	-		IAI47_05650	0.54	-0.3
1,187,422	+		IAI47_05650	0.54	-2.1
1,187,422	+		IAI47_05650	0.54	+0.4
1,187,423	-		IAI47_05650	0.54	+0.4
1,187,482	+		IAI47_05650	0.62	+1.9
1,187,482	+		IAI47_05650	0.62	-1.2
1,187,482	+		IAI47_05650	0.62	+0.1
1,187,483	-		IAI47_05650	0.62	-1.6
1,187,483	-		IAI47_05650	0.62	-1.2
1,187,483	-		IAI47_05650	0.62	-2.0
1,187,483	-		IAI47_05650	0.62	-1.7
1,187,493	-		IAI47_05650	0.63	-0.1
1,187,493	-		IAI47_05650	0.63	-1.1
1,187,535	+		IAI47_05650	0.68	+0.1
1,187,535	+		IAI47_05650	0.68	-2.6
1,187,535	+		IAI47_05650	0.68	+0.8
1,187,536	-		IAI47_05650	0.69	-0.5
1,187,536	-		IAI47_05650	0.69	-0.6
1,187,536	-		IAI47_05650	0.69	-1.3
1,187,536	-		IAI47_05650	0.69	-0.5
1,187,536	-		IAI47_05650	0.69	-1.5
1,187,597	+		IAI47_05650	0.76	+0.4
1,187,597	+		IAI47_05650	0.76	+0.3
1,187,597	+		IAI47_05650	0.76	-0.9
1,187,667	+		IAI47_05650	0.85	-0.9
1,187,671	-		IAI47_05650	0.86	-1.2
1,187,671	-		IAI47_05650	0.86	+0.1
1,187,674	+		IAI47_05650	0.86	+0.1
1,187,675	-		IAI47_05650	0.86	-1.6
1,187,675	-		IAI47_05650	0.86	-0.6
1,187,696	+		IAI47_05650	0.89	-0.3
1,187,697	-		IAI47_05650	0.89	+0.3
1,187,705	+				+0.7
1,187,706	-				-2.1
1,187,738	+				+2.1
1,187,739	-				-0.8
1,187,766	+				-0.0
1,187,767	-				+0.1
1,188,100	-				-0.1
1,188,122	-				-0.8
1,188,212	+				+0.2
1,188,235	-				+0.3
1,188,236	+				-0.9
1,188,236	+				+0.6
1,188,237	-				-1.6
1,188,237	-				-2.3
1,188,237	-				-1.5
1,188,274	-				-0.8
1,188,281	+		IAI47_05660	0.11	-0.8
1,188,281	+		IAI47_05660	0.11	+0.4
1,188,282	-		IAI47_05660	0.11	-0.1
1,188,370	-		IAI47_05660	0.22	-0.4
1,188,371	+		IAI47_05660	0.22	-1.6
1,188,371	+		IAI47_05660	0.22	-2.1
1,188,372	-		IAI47_05660	0.22	-1.1
1,188,373	+		IAI47_05660	0.22	+0.7
1,188,374	-		IAI47_05660	0.22	-1.1
1,188,378	-		IAI47_05660	0.23	-1.4
1,188,390	+		IAI47_05660	0.24	-0.3
1,188,391	-		IAI47_05660	0.24	+0.5
1,188,392	+		IAI47_05660	0.24	+0.3
1,188,392	+		IAI47_05660	0.24	-0.9
1,188,392	+		IAI47_05660	0.24	-0.8
1,188,392	+		IAI47_05660	0.24	-0.7
1,188,399	+		IAI47_05660	0.25	-1.8
1,188,399	+		IAI47_05660	0.25	-0.7
1,188,400	-		IAI47_05660	0.25	-0.7
1,188,400	-		IAI47_05660	0.25	-0.7
1,188,406	-		IAI47_05660	0.26	+0.6
1,188,477	+		IAI47_05660	0.35	+1.1
1,188,497	+		IAI47_05660	0.37	-1.3
1,188,525	+		IAI47_05660	0.41	-0.2
1,188,535	-		IAI47_05660	0.42	-1.2
1,188,558	+		IAI47_05660	0.45	+0.1
1,188,558	+		IAI47_05660	0.45	-1.2
1,188,568	-		IAI47_05660	0.46	+1.7
1,188,585	+		IAI47_05660	0.48	-1.4
1,188,586	-		IAI47_05660	0.48	+0.4
1,188,586	-		IAI47_05660	0.48	-0.4
1,188,586	-		IAI47_05660	0.48	+0.7
1,188,586	-		IAI47_05660	0.48	-2.0
1,188,655	-		IAI47_05660	0.57	-0.6
1,188,655	-		IAI47_05660	0.57	-0.3
1,188,904	-		IAI47_05660	0.87	-0.8
1,188,945	-				-1.2
1,189,006	+				-1.7
1,189,006	+				+0.4
1,189,028	-				+1.1
1,189,037	-				-1.1
1,189,080	-				-1.5
1,189,131	-				+0.0
1,189,161	-				-1.7
1,189,188	+				-0.8
1,189,225	+				-1.3
1,189,226	-				-0.4
1,189,262	+				+0.6
1,189,263	-				-0.2
1,189,294	-		IAI47_05665	0.24	-2.0
1,189,320	+		IAI47_05665	0.36	+1.0
1,189,326	+		IAI47_05665	0.38	-0.3
1,189,329	-		IAI47_05665	0.40	+1.1
1,189,329	-		IAI47_05665	0.40	-2.5
1,189,334	+		IAI47_05665	0.42	-0.9
1,189,335	-		IAI47_05665	0.42	+0.1
1,189,351	+		IAI47_05665	0.50	-0.1
1,189,389	-		IAI47_05665	0.67	-0.4
1,189,401	+		IAI47_05665	0.73	-0.9
1,189,401	+		IAI47_05665	0.73	-0.1
1,189,424	+		IAI47_05665	0.83	+1.1
1,189,424	+		IAI47_05665	0.83	-1.1
1,189,473	+				-1.0
1,189,473	+				+1.7
1,189,473	+				+2.2
1,189,474	-				-0.7
1,189,474	-				-0.0
1,189,474	-				-0.4
1,189,577	+				+1.1
1,189,578	+				+2.0
1,189,578	+				-1.4
1,189,578	+				+3.0
1,189,578	+				-1.1
1,189,579	-				-2.2
1,189,579	-				-0.2
1,189,579	-				-0.7
1,189,579	-				+0.3
1,189,598	+				+0.4
1,189,598	+				+0.2
1,189,599	-				+0.4
1,189,651	+				-0.5
1,189,666	-				-1.4
1,189,706	+				-0.3
1,189,706	+				+1.7
1,189,706	+				+0.4
1,189,707	-				-1.4
1,189,717	+				-0.9
1,189,717	+				+0.4
1,189,717	+				+0.4
1,189,717	+				-0.6
1,189,718	-				+0.6
1,189,720	+				-0.8
1,189,720	+				+0.7
1,189,720	+				+0.8
1,189,720	+				+1.0
1,189,720	+				-0.1
1,189,737	+				+0.9
1,189,738	-				+0.6
1,189,738	-				-0.9
1,189,767	+				+0.4
1,189,824	+				-1.4
1,189,825	-				+1.7
1,189,825	-				-1.8
1,189,845	-				+0.6
1,189,847	+				-0.6
1,189,856	-				+0.5
1,189,859	+				+0.5
1,189,859	+				-0.9
1,189,859	+				+0.1
1,189,859	+				-0.6
1,189,859	+				+0.5
1,189,860	-				-0.4
1,189,860	-				-0.2
1,189,860	-				+0.3
1,189,860	-				-0.6
1,189,911	+				+0.7
1,189,911	+				-0.8
1,189,912	-				+2.0
1,189,917	+				-0.4
1,189,917	+				+2.0
1,189,918	-				-0.1
1,189,934	+				-1.6
1,189,935	-				+0.1
1,189,935	-				-0.4
1,189,935	-				+0.5
1,189,958	+				+0.2
1,189,958	+				+0.9
1,189,958	+				-0.9
1,189,959	-				-0.1
1,189,968	-				-0.8
1,189,982	-				+0.1
1,189,982	-				+1.1
1,189,982	-				-0.5
1,189,984	+				+0.6
1,189,984	+				-0.3
1,189,984	+				+0.4
1,189,991	+				-0.2
1,189,992	-				-1.0
1,189,992	-				+0.9
1,189,992	-				-0.6
1,189,992	-				+1.1
1,189,993	+				+1.6
1,189,993	+				+0.7
1,189,994	-				-2.4
1,189,994	-				+0.4
1,190,001	+				-0.2
1,190,002	-				-1.1
1,190,002	-				+1.6