Experiment: Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt IAI47_03495 and IAI47_03500 are separated by 71 nucleotides IAI47_03500 and IAI47_03505 are separated by 0 nucleotides IAI47_03505 and IAI47_03510 are separated by 239 nucleotides
IAI47_03495: IAI47_03495 - siderophore-interacting protein, at 729,497 to 730,279
_03495
IAI47_03500: IAI47_03500 - helix-turn-helix transcriptional regulator, at 730,351 to 730,890
_03500
IAI47_03505: IAI47_03505 - SelT/SelW/SelH family protein, at 730,891 to 731,187
_03505
IAI47_03510: IAI47_03510 - TonB-dependent receptor, at 731,427 to 733,799
_03510
Position (kb) 730
731 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 729.389 kb on + strand at 729.390 kb on - strand at 729.390 kb on - strand at 729.478 kb on + strand at 729.478 kb on + strand at 729.479 kb on - strand at 729.479 kb on - strand at 729.479 kb on - strand at 729.479 kb on - strand at 729.479 kb on - strand at 729.479 kb on - strand at 729.479 kb on - strand at 729.479 kb on - strand at 729.479 kb on - strand at 729.493 kb on + strand at 729.493 kb on + strand at 729.493 kb on + strand at 729.494 kb on - strand at 729.494 kb on - strand at 729.494 kb on - strand at 729.511 kb on + strand at 729.511 kb on + strand at 729.512 kb on - strand at 729.512 kb on - strand at 729.512 kb on - strand at 729.512 kb on - strand at 729.559 kb on + strand at 729.559 kb on + strand at 729.574 kb on + strand at 729.574 kb on + strand at 729.574 kb on + strand at 729.580 kb on + strand, within IAI47_03495 at 729.580 kb on + strand, within IAI47_03495 at 729.606 kb on + strand, within IAI47_03495 at 729.606 kb on + strand, within IAI47_03495 at 729.606 kb on + strand, within IAI47_03495 at 729.606 kb on + strand, within IAI47_03495 at 729.607 kb on - strand, within IAI47_03495 at 729.607 kb on - strand, within IAI47_03495 at 729.607 kb on - strand, within IAI47_03495 at 729.607 kb on - strand, within IAI47_03495 at 729.607 kb on - strand, within IAI47_03495 at 729.637 kb on + strand, within IAI47_03495 at 729.637 kb on + strand, within IAI47_03495 at 729.637 kb on + strand, within IAI47_03495 at 729.637 kb on + strand, within IAI47_03495 at 729.637 kb on + strand, within IAI47_03495 at 729.637 kb on + strand, within IAI47_03495 at 729.637 kb on + strand, within IAI47_03495 at 729.637 kb on + strand, within IAI47_03495 at 729.638 kb on - strand, within IAI47_03495 at 729.670 kb on - strand, within IAI47_03495 at 729.670 kb on - strand, within IAI47_03495 at 729.670 kb on - strand, within IAI47_03495 at 729.768 kb on - strand, within IAI47_03495 at 729.783 kb on + strand, within IAI47_03495 at 729.815 kb on + strand, within IAI47_03495 at 729.815 kb on + strand, within IAI47_03495 at 729.816 kb on - strand, within IAI47_03495 at 729.816 kb on - strand, within IAI47_03495 at 729.816 kb on - strand, within IAI47_03495 at 729.816 kb on - strand, within IAI47_03495 at 729.816 kb on - strand, within IAI47_03495 at 729.816 kb on - strand, within IAI47_03495 at 729.816 kb on - strand, within IAI47_03495 at 729.817 kb on + strand, within IAI47_03495 at 729.817 kb on + strand, within IAI47_03495 at 729.817 kb on + strand, within IAI47_03495 at 729.871 kb on + strand, within IAI47_03495 at 729.876 kb on + strand, within IAI47_03495 at 729.876 kb on + strand, within IAI47_03495 at 729.876 kb on + strand, within IAI47_03495 at 729.877 kb on - strand, within IAI47_03495 at 729.877 kb on - strand, within IAI47_03495 at 729.880 kb on + strand, within IAI47_03495 at 729.880 kb on + strand, within IAI47_03495 at 729.880 kb on + strand, within IAI47_03495 at 729.920 kb on + strand, within IAI47_03495 at 729.921 kb on - strand, within IAI47_03495 at 729.921 kb on - strand, within IAI47_03495 at 729.935 kb on + strand, within IAI47_03495 at 729.935 kb on + strand, within IAI47_03495 at 729.935 kb on + strand, within IAI47_03495 at 729.936 kb on - strand, within IAI47_03495 at 729.936 kb on - strand, within IAI47_03495 at 729.936 kb on - strand, within IAI47_03495 at 730.010 kb on + strand, within IAI47_03495 at 730.011 kb on - strand, within IAI47_03495 at 730.011 kb on - strand, within IAI47_03495 at 730.011 kb on - strand, within IAI47_03495 at 730.011 kb on - strand, within IAI47_03495 at 730.019 kb on - strand, within IAI47_03495 at 730.043 kb on + strand, within IAI47_03495 at 730.043 kb on + strand, within IAI47_03495 at 730.043 kb on + strand, within IAI47_03495 at 730.044 kb on - strand, within IAI47_03495 at 730.044 kb on - strand, within IAI47_03495 at 730.044 kb on - strand, within IAI47_03495 at 730.047 kb on + strand, within IAI47_03495 at 730.048 kb on - strand, within IAI47_03495 at 730.160 kb on + strand, within IAI47_03495 at 730.160 kb on + strand, within IAI47_03495 at 730.160 kb on + strand, within IAI47_03495 at 730.161 kb on - strand, within IAI47_03495 at 730.165 kb on + strand, within IAI47_03495 at 730.165 kb on + strand, within IAI47_03495 at 730.165 kb on + strand, within IAI47_03495 at 730.165 kb on + strand, within IAI47_03495 at 730.165 kb on + strand at 730.165 kb on + strand, within IAI47_03495 at 730.166 kb on - strand, within IAI47_03495 at 730.211 kb on + strand at 730.211 kb on + strand at 730.212 kb on - strand at 730.212 kb on - strand at 730.212 kb on - strand at 730.277 kb on + strand at 730.277 kb on + strand at 730.278 kb on - strand at 730.278 kb on - strand at 730.317 kb on - strand at 730.317 kb on - strand at 730.317 kb on - strand at 730.392 kb on + strand at 730.393 kb on - strand at 730.393 kb on - strand at 730.505 kb on - strand, within IAI47_03500 at 730.546 kb on + strand, within IAI47_03500 at 730.546 kb on + strand, within IAI47_03500 at 730.546 kb on + strand, within IAI47_03500 at 730.546 kb on + strand, within IAI47_03500 at 730.546 kb on + strand, within IAI47_03500 at 730.547 kb on - strand, within IAI47_03500 at 730.554 kb on + strand, within IAI47_03500 at 730.554 kb on + strand, within IAI47_03500 at 730.555 kb on - strand, within IAI47_03500 at 730.570 kb on + strand, within IAI47_03500 at 730.570 kb on + strand, within IAI47_03500 at 730.570 kb on + strand, within IAI47_03500 at 730.571 kb on - strand, within IAI47_03500 at 730.571 kb on - strand, within IAI47_03500 at 730.571 kb on - strand, within IAI47_03500 at 730.642 kb on + strand, within IAI47_03500 at 730.642 kb on + strand, within IAI47_03500 at 730.642 kb on + strand, within IAI47_03500 at 730.642 kb on + strand, within IAI47_03500 at 730.720 kb on - strand, within IAI47_03500 at 730.720 kb on - strand, within IAI47_03500 at 730.720 kb on - strand, within IAI47_03500 at 730.720 kb on - strand, within IAI47_03500 at 730.760 kb on + strand, within IAI47_03500 at 730.760 kb on + strand, within IAI47_03500 at 730.761 kb on - strand, within IAI47_03500 at 730.775 kb on - strand, within IAI47_03500 at 730.818 kb on + strand, within IAI47_03500 at 730.818 kb on + strand, within IAI47_03500 at 730.818 kb on + strand, within IAI47_03500 at 730.819 kb on - strand, within IAI47_03500 at 730.848 kb on + strand at 730.888 kb on + strand at 730.889 kb on - strand at 730.889 kb on - strand at 730.889 kb on - strand at 730.932 kb on + strand, within IAI47_03505 at 730.932 kb on + strand, within IAI47_03505 at 730.933 kb on - strand, within IAI47_03505 at 730.957 kb on + strand, within IAI47_03505 at 730.957 kb on + strand, within IAI47_03505 at 731.034 kb on + strand, within IAI47_03505 at 731.046 kb on + strand, within IAI47_03505 at 731.046 kb on + strand, within IAI47_03505 at 731.047 kb on - strand, within IAI47_03505 at 731.055 kb on + strand, within IAI47_03505 at 731.071 kb on + strand, within IAI47_03505 at 731.072 kb on - strand, within IAI47_03505 at 731.072 kb on - strand, within IAI47_03505 at 731.072 kb on - strand, within IAI47_03505 at 731.072 kb on - strand, within IAI47_03505 at 731.097 kb on + strand, within IAI47_03505 at 731.097 kb on + strand, within IAI47_03505 at 731.097 kb on + strand, within IAI47_03505 at 731.098 kb on - strand, within IAI47_03505 at 731.098 kb on - strand, within IAI47_03505 at 731.151 kb on + strand, within IAI47_03505 at 731.151 kb on + strand, within IAI47_03505 at 731.151 kb on + strand, within IAI47_03505 at 731.151 kb on + strand, within IAI47_03505 at 731.151 kb on + strand, within IAI47_03505 at 731.152 kb on - strand, within IAI47_03505 at 731.152 kb on - strand, within IAI47_03505 at 731.152 kb on - strand, within IAI47_03505 at 731.152 kb on - strand, within IAI47_03505 at 731.152 kb on - strand, within IAI47_03505 at 731.152 kb on - strand, within IAI47_03505 at 731.156 kb on + strand, within IAI47_03505 at 731.156 kb on + strand, within IAI47_03505 at 731.156 kb on + strand, within IAI47_03505 at 731.157 kb on - strand, within IAI47_03505 at 731.163 kb on + strand at 731.163 kb on + strand at 731.164 kb on - strand at 731.164 kb on - strand at 731.187 kb on + strand at 731.187 kb on + strand at 731.187 kb on + strand at 731.187 kb on + strand at 731.187 kb on + strand at 731.188 kb on - strand at 731.188 kb on - strand at 731.188 kb on - strand at 731.188 kb on - strand at 731.193 kb on + strand at 731.193 kb on + strand at 731.193 kb on + strand at 731.193 kb on + strand at 731.194 kb on - strand at 731.194 kb on - strand at 731.194 kb on - strand at 731.194 kb on - strand at 731.194 kb on - strand at 731.201 kb on + strand at 731.201 kb on + strand at 731.201 kb on + strand at 731.202 kb on - strand at 731.202 kb on - strand at 731.211 kb on + strand at 731.211 kb on + strand at 731.211 kb on + strand at 731.212 kb on - strand at 731.212 kb on - strand at 731.212 kb on - strand at 731.212 kb on - strand at 731.212 kb on - strand at 731.212 kb on - strand at 731.212 kb on - strand at 731.256 kb on + strand at 731.312 kb on + strand at 731.313 kb on - strand at 731.313 kb on - strand at 731.316 kb on + strand at 731.316 kb on + strand at 731.317 kb on - strand at 731.317 kb on - strand at 731.317 kb on - strand at 731.317 kb on - strand at 731.317 kb on - strand at 731.317 kb on - strand at 731.317 kb on - strand at 731.320 kb on - strand at 731.354 kb on + strand at 731.355 kb on - strand at 731.355 kb on - strand at 731.369 kb on + strand at 731.369 kb on + strand at 731.369 kb on + strand at 731.369 kb on + strand at 731.370 kb on - strand at 731.397 kb on + strand at 731.397 kb on + strand at 731.408 kb on - strand at 731.415 kb on + strand at 731.416 kb on - strand at 731.416 kb on - strand at 731.426 kb on + strand at 731.427 kb on - strand at 731.427 kb on - strand at 731.427 kb on - strand at 731.427 kb on - strand at 731.427 kb on - strand at 731.498 kb on + strand at 731.498 kb on + strand at 731.498 kb on + strand at 731.511 kb on + strand at 731.511 kb on + strand at 731.511 kb on + strand at 731.511 kb on + strand at 731.511 kb on + strand at 731.512 kb on - strand at 731.512 kb on - strand at 731.512 kb on - strand at 731.512 kb on - strand at 731.512 kb on - strand at 731.512 kb on - strand at 731.512 kb on - strand at 731.512 kb on - strand at 731.534 kb on + strand at 731.535 kb on - strand at 731.535 kb on - strand at 731.539 kb on + strand at 731.578 kb on + strand at 731.578 kb on + strand at 731.578 kb on + strand at 731.578 kb on + strand at 731.579 kb on - strand at 731.579 kb on - strand at 731.579 kb on - strand at 731.579 kb on - strand at 731.622 kb on - strand at 731.682 kb on - strand, within IAI47_03510 at 731.682 kb on - strand, within IAI47_03510 at 731.688 kb on + strand, within IAI47_03510 at 731.688 kb on + strand, within IAI47_03510 at 731.688 kb on + strand, within IAI47_03510 at 731.689 kb on - strand, within IAI47_03510 at 731.689 kb on - strand, within IAI47_03510 at 731.689 kb on - strand, within IAI47_03510 at 731.714 kb on + strand, within IAI47_03510 at 731.715 kb on - strand, within IAI47_03510 at 731.717 kb on + strand, within IAI47_03510 at 731.717 kb on + strand, within IAI47_03510 at 731.717 kb on + strand, within IAI47_03510 at 731.718 kb on - strand, within IAI47_03510 at 731.718 kb on - strand, within IAI47_03510 at 731.718 kb on - strand, within IAI47_03510 at 731.763 kb on + strand, within IAI47_03510 at 731.764 kb on - strand, within IAI47_03510 at 731.764 kb on - strand, within IAI47_03510 at 731.773 kb on - strand, within IAI47_03510 at 731.853 kb on + strand, within IAI47_03510 at 731.853 kb on + strand, within IAI47_03510 at 731.853 kb on + strand, within IAI47_03510 at 731.853 kb on + strand, within IAI47_03510 at 731.853 kb on + strand, within IAI47_03510 at 731.853 kb on + strand, within IAI47_03510 at 731.853 kb on + strand, within IAI47_03510 at 731.853 kb on + strand, within IAI47_03510 at 731.853 kb on + strand, within IAI47_03510 at 731.853 kb on + strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.854 kb on - strand, within IAI47_03510 at 731.857 kb on + strand, within IAI47_03510 at 731.857 kb on + strand, within IAI47_03510 at 731.857 kb on + strand, within IAI47_03510 at 731.857 kb on + strand, within IAI47_03510 at 731.857 kb on + strand, within IAI47_03510 at 731.857 kb on + strand, within IAI47_03510 at 731.858 kb on - strand, within IAI47_03510 at 731.858 kb on - strand, within IAI47_03510
Per-strain Table
Position Strand Gene LocusTag Fraction Survival; Treatment=FW300 (pH7.4) with 5.0 mM Glucose; TreatmentDuration=24hrs; Outgrowth=LBkan50 remove 729,389 + +0.7 729,390 - +0.0 729,390 - -1.7 729,478 + +0.0 729,478 + +0.1 729,479 - +0.0 729,479 - -0.3 729,479 - -1.4 729,479 - -0.9 729,479 - -0.7 729,479 - -1.0 729,479 - +0.7 729,479 - -1.4 729,479 - -0.0 729,493 + +0.3 729,493 + -0.1 729,493 + +0.3 729,494 - -0.5 729,494 - -1.2 729,494 - -1.1 729,511 + -0.6 729,511 + -0.5 729,512 - +0.5 729,512 - +0.3 729,512 - -0.8 729,512 - +0.1 729,559 + -0.0 729,559 + -1.3 729,574 + -0.6 729,574 + -1.5 729,574 + -0.0 729,580 + IAI47_03495 0.11 +0.5 729,580 + IAI47_03495 0.11 +1.9 729,606 + IAI47_03495 0.14 -1.0 729,606 + IAI47_03495 0.14 -0.1 729,606 + IAI47_03495 0.14 +2.2 729,606 + IAI47_03495 0.14 -0.9 729,607 - IAI47_03495 0.14 -1.4 729,607 - IAI47_03495 0.14 +0.0 729,607 - IAI47_03495 0.14 +0.4 729,607 - IAI47_03495 0.14 +0.8 729,607 - IAI47_03495 0.14 -0.4 729,637 + IAI47_03495 0.18 -0.2 729,637 + IAI47_03495 0.18 -0.3 729,637 + IAI47_03495 0.18 +0.2 729,637 + IAI47_03495 0.18 -0.2 729,637 + IAI47_03495 0.18 -0.3 729,637 + IAI47_03495 0.18 +0.2 729,637 + IAI47_03495 0.18 -0.4 729,637 + IAI47_03495 0.18 +0.6 729,638 - IAI47_03495 0.18 -1.3 729,670 - IAI47_03495 0.22 -0.4 729,670 - IAI47_03495 0.22 +0.6 729,670 - IAI47_03495 0.22 -2.2 729,768 - IAI47_03495 0.35 +0.8 729,783 + IAI47_03495 0.37 +0.5 729,815 + IAI47_03495 0.41 -3.8 729,815 + IAI47_03495 0.41 -1.2 729,816 - IAI47_03495 0.41 -1.8 729,816 - IAI47_03495 0.41 +1.1 729,816 - IAI47_03495 0.41 -0.0 729,816 - IAI47_03495 0.41 +0.4 729,816 - IAI47_03495 0.41 -1.1 729,816 - IAI47_03495 0.41 -0.5 729,816 - IAI47_03495 0.41 -0.5 729,817 + IAI47_03495 0.41 +0.1 729,817 + IAI47_03495 0.41 -0.9 729,817 + IAI47_03495 0.41 -0.3 729,871 + IAI47_03495 0.48 -0.2 729,876 + IAI47_03495 0.48 -0.3 729,876 + IAI47_03495 0.48 +0.3 729,876 + IAI47_03495 0.48 +0.0 729,877 - IAI47_03495 0.49 +1.4 729,877 - IAI47_03495 0.49 +0.3 729,880 + IAI47_03495 0.49 +0.0 729,880 + IAI47_03495 0.49 +0.4 729,880 + IAI47_03495 0.49 +0.3 729,920 + IAI47_03495 0.54 -0.8 729,921 - IAI47_03495 0.54 -0.6 729,921 - IAI47_03495 0.54 -1.4 729,935 + IAI47_03495 0.56 -1.1 729,935 + IAI47_03495 0.56 +0.6 729,935 + IAI47_03495 0.56 +0.1 729,936 - IAI47_03495 0.56 +0.1 729,936 - IAI47_03495 0.56 -0.3 729,936 - IAI47_03495 0.56 +1.2 730,010 + IAI47_03495 0.66 +0.6 730,011 - IAI47_03495 0.66 -0.1 730,011 - IAI47_03495 0.66 +1.8 730,011 - IAI47_03495 0.66 -0.3 730,011 - IAI47_03495 0.66 +0.8 730,019 - IAI47_03495 0.67 -0.4 730,043 + IAI47_03495 0.70 -2.3 730,043 + IAI47_03495 0.70 -0.7 730,043 + IAI47_03495 0.70 +0.2 730,044 - IAI47_03495 0.70 -0.8 730,044 - IAI47_03495 0.70 -0.5 730,044 - IAI47_03495 0.70 -0.6 730,047 + IAI47_03495 0.70 -1.0 730,048 - IAI47_03495 0.70 -0.1 730,160 + IAI47_03495 0.85 +1.1 730,160 + IAI47_03495 0.85 -0.3 730,160 + IAI47_03495 0.85 -0.0 730,161 - IAI47_03495 0.85 -0.2 730,165 + IAI47_03495 0.85 -0.2 730,165 + IAI47_03495 0.85 +0.8 730,165 + IAI47_03495 0.85 +0.0 730,165 + IAI47_03495 0.85 -0.9 730,165 + +3.4 730,165 + IAI47_03495 0.85 +1.1 730,166 - IAI47_03495 0.85 -0.8 730,211 + -0.9 730,211 + -1.9 730,212 - -2.4 730,212 - -0.2 730,212 - -1.4 730,277 + +1.1 730,277 + -1.1 730,278 - -2.0 730,278 - -0.4 730,317 - -0.2 730,317 - -1.0 730,317 - -2.6 730,392 + -0.2 730,393 - -0.1 730,393 - +0.4 730,505 - IAI47_03500 0.29 +0.1 730,546 + IAI47_03500 0.36 +2.7 730,546 + IAI47_03500 0.36 +2.5 730,546 + IAI47_03500 0.36 -0.1 730,546 + IAI47_03500 0.36 +0.0 730,546 + IAI47_03500 0.36 -1.0 730,547 - IAI47_03500 0.36 -1.6 730,554 + IAI47_03500 0.38 -0.8 730,554 + IAI47_03500 0.38 +2.4 730,555 - IAI47_03500 0.38 -0.9 730,570 + IAI47_03500 0.41 +0.6 730,570 + IAI47_03500 0.41 +1.7 730,570 + IAI47_03500 0.41 +2.8 730,571 - IAI47_03500 0.41 +0.8 730,571 - IAI47_03500 0.41 -1.2 730,571 - IAI47_03500 0.41 +0.0 730,642 + IAI47_03500 0.54 +0.4 730,642 + IAI47_03500 0.54 +1.4 730,642 + IAI47_03500 0.54 +0.3 730,642 + IAI47_03500 0.54 +1.1 730,720 - IAI47_03500 0.68 -0.6 730,720 - IAI47_03500 0.68 +0.6 730,720 - IAI47_03500 0.68 -1.9 730,720 - IAI47_03500 0.68 -0.9 730,760 + IAI47_03500 0.76 +0.1 730,760 + IAI47_03500 0.76 +0.7 730,761 - IAI47_03500 0.76 -1.8 730,775 - IAI47_03500 0.79 -0.4 730,818 + IAI47_03500 0.86 +0.5 730,818 + IAI47_03500 0.86 -0.6 730,818 + IAI47_03500 0.86 +1.5 730,819 - 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IAI47_03510 0.18 -0.7 731,854 - IAI47_03510 0.18 -0.6 731,854 - IAI47_03510 0.18 -1.1 731,857 + IAI47_03510 0.18 -0.8 731,857 + IAI47_03510 0.18 -0.1 731,857 + IAI47_03510 0.18 +2.0 731,857 + IAI47_03510 0.18 +0.1 731,857 + IAI47_03510 0.18 -0.0 731,857 + IAI47_03510 0.18 -0.0 731,858 - IAI47_03510 0.18 -1.0 731,858 - IAI47_03510 0.18 +1.0
Or see this region's nucleotide sequence