Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1599

Experiment: BG11 with Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	BG11 with Nalidixic 0.00390625 mg/ml
1,664,298	+				-0.9
1,664,306	-				-1.2
1,664,334	+				+0.4
1,664,334	+				-1.6
1,664,342	-				-0.6
1,664,350	-				-0.3
1,664,359	-				-0.0
1,664,364	-				-0.8
1,664,427	+		Synpcc7942_1598	0.15	-0.6
1,664,428	+		Synpcc7942_1598	0.15	-0.0
1,664,470	-		Synpcc7942_1598	0.21	-1.7
1,664,479	-		Synpcc7942_1598	0.22	-0.0
1,664,479	-		Synpcc7942_1598	0.22	+0.9
1,664,482	+		Synpcc7942_1598	0.22	-0.7
1,664,515	+		Synpcc7942_1598	0.26	-0.5
1,664,515	-		Synpcc7942_1598	0.26	-1.6
1,664,540	+		Synpcc7942_1598	0.29	+1.1
1,664,540	+		Synpcc7942_1598	0.29	+0.2
1,664,540	+		Synpcc7942_1598	0.29	-0.2
1,664,548	-		Synpcc7942_1598	0.30	-0.2
1,664,548	-		Synpcc7942_1598	0.30	-0.2
1,664,549	+		Synpcc7942_1598	0.31	-0.6
1,664,549	+		Synpcc7942_1598	0.31	+0.2
1,664,549	+		Synpcc7942_1598	0.31	+0.5
1,664,549	+		Synpcc7942_1598	0.31	+0.5
1,664,549	+		Synpcc7942_1598	0.31	+0.3
1,664,555	+		Synpcc7942_1598	0.31	-0.3
1,664,557	-		Synpcc7942_1598	0.32	+0.3
1,664,563	-		Synpcc7942_1598	0.32	+0.7
1,664,567	+		Synpcc7942_1598	0.33	-0.8
1,664,577	+		Synpcc7942_1598	0.34	-0.1
1,664,580	-		Synpcc7942_1598	0.34	+1.0
1,664,662	-		Synpcc7942_1598	0.45	-0.6
1,664,666	+		Synpcc7942_1598	0.45	+0.3
1,664,666	+		Synpcc7942_1598	0.45	+1.3
1,664,666	+		Synpcc7942_1598	0.45	-0.5
1,664,672	+		Synpcc7942_1598	0.46	+0.3
1,664,673	+		Synpcc7942_1598	0.46	-0.1
1,664,674	-		Synpcc7942_1598	0.46	+0.5
1,664,674	-		Synpcc7942_1598	0.46	+0.6
1,664,680	-		Synpcc7942_1598	0.47	-0.6
1,664,680	-		Synpcc7942_1598	0.47	+1.2
1,664,680	-		Synpcc7942_1598	0.47	-1.8
1,664,733	+		Synpcc7942_1598	0.54	-0.5
1,664,741	-		Synpcc7942_1598	0.55	+0.3
1,664,751	-		Synpcc7942_1598	0.56	-0.3
1,664,751	-		Synpcc7942_1598	0.56	-0.7
1,664,777	-		Synpcc7942_1598	0.59	+0.0
1,664,787	+		Synpcc7942_1598	0.61	-0.7
1,664,787	-		Synpcc7942_1598	0.61	-0.1
1,664,787	-		Synpcc7942_1598	0.61	-0.1
1,664,795	-		Synpcc7942_1598	0.62	-0.2
1,664,795	-		Synpcc7942_1598	0.62	-0.8
1,664,814	+		Synpcc7942_1598	0.64	-0.6
1,664,826	+		Synpcc7942_1598	0.65	+0.3
1,664,826	+		Synpcc7942_1598	0.65	-1.6
1,664,834	-		Synpcc7942_1598	0.66	-1.1
1,664,851	+		Synpcc7942_1598	0.69	+0.4
1,664,931	+		Synpcc7942_1598	0.79	+0.7
1,664,931	+		Synpcc7942_1598	0.79	-1.4
1,664,939	-		Synpcc7942_1598	0.80	-0.5
1,664,965	+		Synpcc7942_1598	0.83	+0.1
1,664,977	-		Synpcc7942_1598	0.84	-1.3
1,664,996	+		Synpcc7942_1598	0.87	-0.2
1,665,016	-		Synpcc7942_1598	0.89	+0.2
1,665,030	-				+0.2
1,665,056	+				-1.1
1,665,061	+				-0.9
1,665,061	+				-0.0
1,665,069	-				+0.6
1,665,069	-				-0.3
1,665,069	-				-0.0
1,665,069	-				-0.1
1,665,071	-				-0.0
1,665,077	+				+0.0
1,665,079	+				-1.5
1,665,089	+				-0.2
1,665,097	-				-0.4
1,665,131	-				-0.2
1,665,165	+				+0.7
1,665,193	+				-0.2
1,665,221	-		Synpcc7942_1599	0.11	-0.8
1,665,221	-		Synpcc7942_1599	0.11	-0.5
1,665,246	+		Synpcc7942_1599	0.14	-0.7
1,665,246	+		Synpcc7942_1599	0.14	+0.7
1,665,271	+		Synpcc7942_1599	0.16	+0.2
1,665,271	+		Synpcc7942_1599	0.16	-0.2
1,665,271	+		Synpcc7942_1599	0.16	-0.7
1,665,308	+		Synpcc7942_1599	0.19	+0.8
1,665,393	-		Synpcc7942_1599	0.27	-0.5
1,665,402	-		Synpcc7942_1599	0.28	-1.1
1,665,407	-		Synpcc7942_1599	0.29	-1.5
1,665,421	+		Synpcc7942_1599	0.30	-0.3
1,665,429	-		Synpcc7942_1599	0.31	+1.3
1,665,451	-		Synpcc7942_1599	0.33	+0.2
1,665,474	-		Synpcc7942_1599	0.35	-0.3
1,665,479	-		Synpcc7942_1599	0.35	+0.6
1,665,504	+		Synpcc7942_1599	0.37	+0.4
1,665,531	-		Synpcc7942_1599	0.40	-0.8
1,665,539	+		Synpcc7942_1599	0.41	-0.2
1,665,658	-		Synpcc7942_1599	0.52	+0.4
1,665,658	-		Synpcc7942_1599	0.52	+0.7
1,665,696	-		Synpcc7942_1599	0.55	-1.8
1,665,696	-		Synpcc7942_1599	0.55	-0.6
1,665,708	+		Synpcc7942_1599	0.56	+0.7
1,665,716	-		Synpcc7942_1599	0.57	+0.4
1,665,721	+		Synpcc7942_1599	0.57	-0.3
1,665,768	+		Synpcc7942_1599	0.62	-1.2
1,665,768	+		Synpcc7942_1599	0.62	+0.3
1,665,777	-		Synpcc7942_1599	0.63	+0.8
1,665,777	-		Synpcc7942_1599	0.63	-0.9
1,665,877	-		Synpcc7942_1599	0.72	+0.2
1,665,902	+		Synpcc7942_1599	0.74	-0.8
1,665,956	-		Synpcc7942_1599	0.79	+1.1
1,665,956	-		Synpcc7942_1599	0.79	+2.4
1,665,958	+		Synpcc7942_1599	0.79	+0.0
1,665,988	+		Synpcc7942_1599	0.82	+0.1
1,665,988	+		Synpcc7942_1599	0.82	-0.2
1,665,991	-		Synpcc7942_1599	0.82	+0.8
1,666,068	-		Synpcc7942_1599	0.89	+0.7
1,666,093	+				+0.6
1,666,098	+				-1.1
1,666,106	-				-1.1
1,666,131	+				-1.5
1,666,143	+				+1.3
1,666,143	+				+0.8
1,666,238	-				-1.6
1,666,357	+		Synpcc7942_1600	0.20	-0.6
1,666,357	+		Synpcc7942_1600	0.20	-2.0
1,666,365	-		Synpcc7942_1600	0.21	-0.3
1,666,459	+		Synpcc7942_1600	0.32	-0.9
1,666,467	-		Synpcc7942_1600	0.33	-2.0
1,666,484	+		Synpcc7942_1600	0.35	-2.0
1,666,499	-		Synpcc7942_1600	0.37	+0.3
1,666,499	-		Synpcc7942_1600	0.37	-0.7
1,666,510	-		Synpcc7942_1600	0.38	+0.1
1,666,566	-		Synpcc7942_1600	0.45	-0.5
1,666,601	+		Synpcc7942_1600	0.49	+0.2
1,666,601	+		Synpcc7942_1600	0.49	+1.0
1,666,613	+		Synpcc7942_1600	0.50	-1.1
1,666,613	+		Synpcc7942_1600	0.50	-2.2
1,666,640	-		Synpcc7942_1600	0.54	-1.1
1,666,643	+		Synpcc7942_1600	0.54	-1.2
1,666,663	-		Synpcc7942_1600	0.56	-1.3
1,666,664	-		Synpcc7942_1600	0.56	-1.1
1,666,665	-		Synpcc7942_1600	0.57	-1.6
1,666,895	-		Synpcc7942_1600	0.84	+0.6
1,666,946	+				-0.9
1,666,946	+				-2.3
1,666,983	+				+0.1
1,667,015	-				-0.9
1,667,026	+				-1.2
1,667,094	-		Synpcc7942_1601	0.21	-1.2
1,667,116	+		Synpcc7942_1601	0.33	-1.6
1,667,121	+		Synpcc7942_1601	0.36	-0.4
1,667,129	+		Synpcc7942_1601	0.41	+1.3
1,667,140	-		Synpcc7942_1601	0.47	+1.0
1,667,152	-		Synpcc7942_1601	0.54	-0.3
1,667,166	+		Synpcc7942_1601	0.62	-0.2